FFCP PHASE1:Hg19::chr10:17271460..17271474,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:17271460..17271474,-|id=chr10:17271460..17271474,-|ontology_enrichment_celltype=CL:0000055!1.05e-22!180;CL:0000048!5.84e-21!430;CL:0002371!1.11e-20!591;CL:0000723!1.64e-19!436;CL:0000144!2.89e-18!625;CL:0000034!1.34e-17!444;CL:0000057!1.26e-15!75;CL:0002057!5.39e-14!42;CL:0002009!8.34e-14!65;CL:0000557!3.50e-13!71;CL:0002194!4.48e-13!63;CL:0000576!4.48e-13!63;CL:0000040!4.48e-13!63;CL:0000559!4.48e-13!63;CL:0000860!5.50e-13!45;CL:0000548!8.97e-13!679;CL:0000004!8.97e-13!679;CL:0000255!8.97e-13!679;CL:0002320!1.08e-12!365;CL:0000012!3.99e-12!682;CL:0000134!1.51e-11!358;CL:0000219!1.95e-11!390;CL:0000839!4.06e-11!70;CL:0000766!7.41e-11!76;CL:0000222!3.97e-09!119;CL:0002620!1.09e-08!23;CL:0000680!4.82e-08!57;CL:0000056!4.82e-08!57;CL:0000355!4.82e-08!57;CL:0000183!7.81e-08!59;CL:0000003!1.38e-07!722;CL:0000187!2.32e-07!54|ontology_enrichment_celltype_v019=CL:0000860;1.72e-13;33!CL:0002057;1.72e-13;33!CL:0000473;2.01e-13;39!CL:0000234;2.01e-13;39!CL:0002620;5.84e-08;23!CL:0000576;2.36e-07;48!CL:0002551;6.99e-07;6|ontology_enrichment_celltype_v019_2=CL:0000473,1.98e-14,48;CL:0000234,1.98e-14,48;CL:0000057,1.11e-13,76;CL:0002009,1.42e-13,61;CL:0000860,1.35e-12,42;CL:0002057,1.35e-12,42;CL:0000048,1.41e-12,427;CL:0002194,2.01e-12,59;CL:0000576,2.01e-12,59;CL:0000040,2.01e-12,59;CL:0000559,2.01e-12,59;CL:0000557,2.41e-12,67;CL:0000723,5.69e-12,433;CL:0000034,3.39e-11,441;CL:0002320,6.07e-11,361;CL:0000134,3.63e-10,354;CL:0000839,3.64e-10,66;CL:0000219,2.95e-09,386;CL:0000766,1.30e-08,72;CL:0002620,4.03e-08,23;CL:0002551,2.21e-07,6|ontology_enrichment_development_v019=CL:0002057;1.11e-09;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!1.30e-20!167;UBERON:0003081!5.29e-16!216;UBERON:0002384!2.25e-13!375;UBERON:0004765!4.15e-13!101;UBERON:0001434!4.15e-13!101;UBERON:0002371!1.87e-12!80;UBERON:0000914!2.16e-12!83;UBERON:0002329!2.16e-12!83;UBERON:0003077!2.16e-12!83;UBERON:0003059!2.16e-12!83;UBERON:0007282!2.16e-12!83;UBERON:0009618!2.16e-12!83;UBERON:0007285!2.16e-12!83;UBERON:0002193!3.88e-12!112;UBERON:0004535!9.43e-12!110;UBERON:0001474!1.61e-11!86;UBERON:0002049!5.83e-11!79;UBERON:0007798!5.83e-11!79;UBERON:0001009!6.10e-11!113;UBERON:0004290!8.67e-11!70;UBERON:0002390!1.60e-10!102;UBERON:0003061!1.60e-10!102;UBERON:0000055!6.86e-09!69;UBERON:0000486!2.32e-08!82;UBERON:0000926!7.34e-08!448;UBERON:0004120!7.34e-08!448;UBERON:0006603!7.34e-08!448;UBERON:0001134!2.51e-07!61;UBERON:0002036!2.51e-07!61;UBERON:0003082!2.51e-07!61;UBERON:0002405!3.98e-07!115;UBERON:0001981!7.97e-07!60;UBERON:0007500!7.97e-07!60;UBERON:0004537!7.97e-07!60;UBERON:0006965!7.97e-07!60|ontology_enrichment_uberon_v019=UBERON:0002067;8.35e-10;9|ontology_enrichment_uberon_v019_2=UBERON:0001434,9.30e-13,100;UBERON:0002204,1.32e-12,167;UBERON:0000926,1.85e-11,315;UBERON:0004120,1.85e-11,315;UBERON:0006603,1.85e-11,315;UBERON:0002384,2.57e-11,371;UBERON:0002371,1.97e-10,76;UBERON:0002067,2.16e-10,9;UBERON:0004016,2.16e-10,9;UBERON:0010083,2.16e-10,9;UBERON:0004765,2.29e-10,90;UBERON:0001474,7.27e-10,82;UBERON:0003081,2.10e-09,203;UBERON:0002405,2.25e-09,93;UBERON:0002199,6.97e-09,46;UBERON:0002416,6.97e-09,46;UBERON:0002193,2.31e-07,108;UBERON:0002097,9.12e-07,41;UBERON:0002390,9.91e-07,98;UBERON:0003061,9.91e-07,98|phase1_expression=1.45342703416445,0,0.140954404095971,0,1.34088328328186,0,2.53299878168311,0,1.30592814099919,0,0,0,0.263766978228454,0.866364470720326,4.63956326019082,0,1.80808358407193,0,0.975865597581014,0.369363174230364,1.22400414746552,2.19418305034661,0.572471974262113,0.958120975510189,1.88313959392204,0.0764134057479513,0.0821005894499457,0,0.786728553697808,0.383829398097213,0.77408061658038,0,0.30120591877825,0,0,0,0,2.21598163412751,0.401088894940283,1.30206522429511,0,0.32389366601898,0.257575567634187,1.16318591023652,0.755751887377619,0.970336244751265,1.16214518452842,2.05583944010913,3.09706370895104,2.8769239232215,2.0492856522328,0.945928919554341,1.72372840368309,0.645484683583826,1.35426486594342,1.50593871634084,1.36453075028923,0.898893937780338,2.44867113896722,0.641858054152187,2.55734850319616,1.64925650093358,1.19678194572979,1.70489900213078,2.90209238628584,3.40431134814684,2.4912889959823,2.26123798731069,2.08593167368081,1.3031330682307,1.81619850790011,1.84138817993782,0.949387162322653,0.422510572623884,0.212604299965044,0.209658645508376,0.22465726229299,0.600707571366025,0.16072558669708,0.285012743741249,0.19891667719909,0.547992461293902,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0.393010762749165,0.616804496998528,0,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0.164437904603676,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:17271460..17271474,- | |||
|id=chr10:17271460..17271474,- | |||
|ontology_enrichment_celltype=CL:0000055!1.05e-22!180;CL:0000048!5.84e-21!430;CL:0002371!1.11e-20!591;CL:0000723!1.64e-19!436;CL:0000144!2.89e-18!625;CL:0000034!1.34e-17!444;CL:0000057!1.26e-15!75;CL:0002057!5.39e-14!42;CL:0002009!8.34e-14!65;CL:0000557!3.50e-13!71;CL:0002194!4.48e-13!63;CL:0000576!4.48e-13!63;CL:0000040!4.48e-13!63;CL:0000559!4.48e-13!63;CL:0000860!5.50e-13!45;CL:0000548!8.97e-13!679;CL:0000004!8.97e-13!679;CL:0000255!8.97e-13!679;CL:0002320!1.08e-12!365;CL:0000012!3.99e-12!682;CL:0000134!1.51e-11!358;CL:0000219!1.95e-11!390;CL:0000839!4.06e-11!70;CL:0000766!7.41e-11!76;CL:0000222!3.97e-09!119;CL:0002620!1.09e-08!23;CL:0000680!4.82e-08!57;CL:0000056!4.82e-08!57;CL:0000355!4.82e-08!57;CL:0000183!7.81e-08!59;CL:0000003!1.38e-07!722;CL:0000187!2.32e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.72e-13;33!CL:0002057;1.72e-13;33!CL:0000473;2.01e-13;39!CL:0000234;2.01e-13;39!CL:0002620;5.84e-08;23!CL:0000576;2.36e-07;48!CL:0002551;6.99e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.98e-14,48;CL:0000234,1.98e-14,48;CL:0000057,1.11e-13,76;CL:0002009,1.42e-13,61;CL:0000860,1.35e-12,42;CL:0002057,1.35e-12,42;CL:0000048,1.41e-12,427;CL:0002194,2.01e-12,59;CL:0000576,2.01e-12,59;CL:0000040,2.01e-12,59;CL:0000559,2.01e-12,59;CL:0000557,2.41e-12,67;CL:0000723,5.69e-12,433;CL:0000034,3.39e-11,441;CL:0002320,6.07e-11,361;CL:0000134,3.63e-10,354;CL:0000839,3.64e-10,66;CL:0000219,2.95e-09,386;CL:0000766,1.30e-08,72;CL:0002620,4.03e-08,23;CL:0002551,2.21e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.11e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.30e-20!167;UBERON:0003081!5.29e-16!216;UBERON:0002384!2.25e-13!375;UBERON:0004765!4.15e-13!101;UBERON:0001434!4.15e-13!101;UBERON:0002371!1.87e-12!80;UBERON:0000914!2.16e-12!83;UBERON:0002329!2.16e-12!83;UBERON:0003077!2.16e-12!83;UBERON:0003059!2.16e-12!83;UBERON:0007282!2.16e-12!83;UBERON:0009618!2.16e-12!83;UBERON:0007285!2.16e-12!83;UBERON:0002193!3.88e-12!112;UBERON:0004535!9.43e-12!110;UBERON:0001474!1.61e-11!86;UBERON:0002049!5.83e-11!79;UBERON:0007798!5.83e-11!79;UBERON:0001009!6.10e-11!113;UBERON:0004290!8.67e-11!70;UBERON:0002390!1.60e-10!102;UBERON:0003061!1.60e-10!102;UBERON:0000055!6.86e-09!69;UBERON:0000486!2.32e-08!82;UBERON:0000926!7.34e-08!448;UBERON:0004120!7.34e-08!448;UBERON:0006603!7.34e-08!448;UBERON:0001134!2.51e-07!61;UBERON:0002036!2.51e-07!61;UBERON:0003082!2.51e-07!61;UBERON:0002405!3.98e-07!115;UBERON:0001981!7.97e-07!60;UBERON:0007500!7.97e-07!60;UBERON:0004537!7.97e-07!60;UBERON:0006965!7.97e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;8.35e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001434,9.30e-13,100;UBERON:0002204,1.32e-12,167;UBERON:0000926,1.85e-11,315;UBERON:0004120,1.85e-11,315;UBERON:0006603,1.85e-11,315;UBERON:0002384,2.57e-11,371;UBERON:0002371,1.97e-10,76;UBERON:0002067,2.16e-10,9;UBERON:0004016,2.16e-10,9;UBERON:0010083,2.16e-10,9;UBERON:0004765,2.29e-10,90;UBERON:0001474,7.27e-10,82;UBERON:0003081,2.10e-09,203;UBERON:0002405,2.25e-09,93;UBERON:0002199,6.97e-09,46;UBERON:0002416,6.97e-09,46;UBERON:0002193,2.31e-07,108;UBERON:0002097,9.12e-07,41;UBERON:0002390,9.91e-07,98;UBERON:0003061,9.91e-07,98 | |||
|phase1_expression=1.45342703416445,0,0.140954404095971,0,1.34088328328186,0,2.53299878168311,0,1.30592814099919,0,0,0,0.263766978228454,0.866364470720326,4.63956326019082,0,1.80808358407193,0,0.975865597581014,0.369363174230364,1.22400414746552,2.19418305034661,0.572471974262113,0.958120975510189,1.88313959392204,0.0764134057479513,0.0821005894499457,0,0.786728553697808,0.383829398097213,0.77408061658038,0,0.30120591877825,0,0,0,0,2.21598163412751,0.401088894940283,1.30206522429511,0,0.32389366601898,0.257575567634187,1.16318591023652,0.755751887377619,0.970336244751265,1.16214518452842,2.05583944010913,3.09706370895104,2.8769239232215,2.0492856522328,0.945928919554341,1.72372840368309,0.645484683583826,1.35426486594342,1.50593871634084,1.36453075028923,0.898893937780338,2.44867113896722,0.641858054152187,2.55734850319616,1.64925650093358,1.19678194572979,1.70489900213078,2.90209238628584,3.40431134814684,2.4912889959823,2.26123798731069,2.08593167368081,1.3031330682307,1.81619850790011,1.84138817993782,0.949387162322653,0.422510572623884,0.212604299965044,0.209658645508376,0.22465726229299,0.600707571366025,0.16072558669708,0.285012743741249,0.19891667719909,0.547992461293902,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0.393010762749165,0.616804496998528,0,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0.164437904603676,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0,0,0.651083453856419,0,0,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0.802320587350522,0.289648807765598,0,2.01210257911091,1.2786256184353,2.1686349143074,0.50133791063589,1.44846518960824,0,1.45990461090791,2.26883561193763,1.55210578223795,1.93236528524877,0.130979075497713,0.364295288292542,0,1.29818957461873,0.870648686496336,1.46253756570752,0,0.571994910780128,0,0.198762407366705,0,0.347140501607594,0.56530794192401,2.93649605346934,0.550236083880135,0.417989933073621,1.55050055501597,0.35576626268671,0.66944122552934,2.01414658554573,0.760272105718513,3.41686880567437,0,5.67099363517232,0.0892997282840798,1.57170560838319,1.0135033243499,0,0.949265659568129,1.09921046358244,0,0,0,0.496971951695318,0.506522046658319,1.72131935057184,1.43418310374407,1.77334191099179,2.80338800071154,0,2.4666754841716,0.311211035399766,0.538842688278752,0.653847612453835,0.302714855289863,0.576175924479999,0.234321431833797,1.5608003841516,1.1409436430889,6.27684458317565,1.64408298101271,1.78060238804945,1.68540968042698,1.42907919878425,1.35117749042945,0.619954687054593,2.37600571456411,3.70900393917835,0.910161361938026,1.43723628363248,1.5150250255866,1.12606667884768,0,0.438977620880838,2.14541457059314,1.65261864797256,0.453728732640084,2.33206526395521,0.427114777637135,1.48352330811693,0.900273288253207,0.412210116953756,2.06112432036503,0.744467425326359,2.53164498361899,0.68205903612839,4.03894038790583,1.01254888506529,0.161646056818812,2.13005755509969,0.302256294682921,0.508681776931463,0.193260853163297,0,0.286804595389004,0,0,0,0.10366105501537,0,0.36497735907583,1.56449532329816,5.78916844373597,1.38134921352481,0.928735856063958,4.33127689001751,0.236613600079688,0.168584690078102,0,0,0,0.237270619111097,0.269662616320329,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0,0,0.651616610620649,2.07986957055916,0,1.85488647960123,0.70445216541493,0.577465791044295,1.38895653772983,1.52203321787679,0,0,0.492434012174795,1.8720341211139,2.37809859661965,0.93733833986777,0,0.283550194484773,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0.414656231081544,0.288239906833923,0.25248486685276,0.126995788584338,0,0,1.71072446022705,0.616964956219941,0,0.571652865261156,0,0,0.4400297149257,1.29271715757778,0,2.535908257668,0.26593811658487,2.08014873822732,0.514414748524284,0,0.799266537048298,0.142977993658148,0,0,0.65147236858747,0,2.37585561880029,1.50719688529793,0,0.499864955910285,1.2162378064119,1.00451418286425,0,0.239624855491583,1.14861935834114,2.85273810081437,0.868687840005475,0.821905290201534,0.895304816199478,0.224170287987055,0.394061520403854,0,0.385029108839245,0.254094624222463,0,0,0.502548796003046,1.27587750330633,0,0,0.828831026872071,0.858840442033979,1.00034104211935,2.17012018959788,1.24782516918484,1.42743191037729,1.10391690523754,1.52283839490527,0.300946099727719,2.27407504055985,2.0694614258501,0.664225598535437,0.737476674166813,0.347534457872331,0,0.343143423810856,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0.604780586659361,0.496215615637554,2.14846762603287,1.12264037773229,0.256278298511402,0.511707249066704,0.321707842287215,1.48418066444991,1.07946785661859,2.84098760501003,0.821271560138091,0.519254429183621,2.20799719073923,0,0,0,0.34444334449382,0.728364672026868,0.655622074797121,0.451199612907412,0.308061348417659,0.784349769176855,1.46139224653261,0.527758144464379,1.13733384070897,1.19065593693561,0,0,0.812839312631559,2.00675909541941,0,0,1.11937377361089,0,0,0,0.3280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| |||
|short_description=p@chr10:17271460..17271474,- | |||
}} |
Revision as of 12:40, 10 September 2013
Short description: | p@chr10:17271460..17271474, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:17271460..17271474, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.98e-14 | 48 |
phagocyte | 1.98e-14 | 48 |
fibroblast | 1.11e-13 | 76 |
macrophage dendritic cell progenitor | 1.42e-13 | 61 |
classical monocyte | 1.35e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.35e-12 | 42 |
multi fate stem cell | 1.41e-12 | 427 |
monopoietic cell | 2.01e-12 | 59 |
monocyte | 2.01e-12 | 59 |
monoblast | 2.01e-12 | 59 |
promonocyte | 2.01e-12 | 59 |
granulocyte monocyte progenitor cell | 2.41e-12 | 67 |
somatic stem cell | 5.69e-12 | 433 |
stem cell | 3.39e-11 | 441 |
connective tissue cell | 6.07e-11 | 361 |
mesenchymal cell | 3.63e-10 | 354 |
myeloid lineage restricted progenitor cell | 3.64e-10 | 66 |
motile cell | 2.95e-09 | 386 |
myeloid leukocyte | 1.30e-08 | 72 |
skin fibroblast | 4.03e-08 | 23 |
fibroblast of dermis | 2.21e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skeletal system | 9.30e-13 | 100 |
musculoskeletal system | 1.32e-12 | 167 |
mesoderm | 1.85e-11 | 315 |
mesoderm-derived structure | 1.85e-11 | 315 |
presumptive mesoderm | 1.85e-11 | 315 |
connective tissue | 2.57e-11 | 371 |
bone marrow | 1.97e-10 | 76 |
dermis | 2.16e-10 | 9 |
dermatome | 2.16e-10 | 9 |
future dermis | 2.16e-10 | 9 |
skeletal element | 2.29e-10 | 90 |
bone element | 7.27e-10 | 82 |
lateral plate mesoderm | 2.10e-09 | 203 |
immune system | 2.25e-09 | 93 |
integument | 6.97e-09 | 46 |
integumental system | 6.97e-09 | 46 |
hemolymphoid system | 2.31e-07 | 108 |
skin of body | 9.12e-07 | 41 |
hematopoietic system | 9.91e-07 | 98 |
blood island | 9.91e-07 | 98 |
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