FFCP PHASE1:Hg19::chr10:30818607..30818619,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:30818607..30818619,+|id=chr10:30818607..30818619,+|ontology_enrichment_celltype=CL:0000838!1.39e-46!52;CL:0000542!1.79e-45!53;CL:0000051!1.79e-45!53;CL:0000738!7.50e-37!140;CL:0002087!7.09e-33!119;CL:0002031!2.83e-29!124;CL:0000037!3.38e-29!172;CL:0000566!3.38e-29!172;CL:0000988!1.24e-26!182;CL:0002032!6.96e-25!165;CL:0000837!6.96e-25!165;CL:0000084!1.03e-24!25;CL:0000827!1.03e-24!25;CL:0000791!1.48e-22!18;CL:0000789!1.48e-22!18;CL:0002420!1.48e-22!18;CL:0002419!1.48e-22!18;CL:0000790!1.48e-22!18;CL:0000945!9.02e-18!24;CL:0000826!9.02e-18!24;CL:0000625!2.14e-17!11;CL:0000236!9.42e-09!14;CL:0000623!3.60e-07!3;CL:0000825!3.60e-07!3;CL:0000767!7.16e-07!3|ontology_enrichment_celltype_v019=CL:0002127;5.55e-16;1!CL:0000911;5.55e-16;1!CL:0000814;5.55e-16;1!CL:0000791;5.77e-13;18!CL:0000789;5.77e-13;18!CL:0002419;5.77e-13;18!CL:0000625;3.51e-12;11!CL:0000542;1.17e-10;53!CL:0000236;2.13e-10;13!CL:0000084;2.07e-09;25|ontology_enrichment_celltype_v019_2=CL:0000838,8.08e-17,52;CL:0000542,1.73e-16,53;CL:0000051,1.73e-16,53;CL:0002127,5.56e-16,1;CL:0000914,5.56e-16,1;CL:0000911,5.56e-16,1;CL:0000814,5.56e-16,1;CL:0002042,5.56e-16,1;CL:0002039,5.56e-16,1;CL:0002040,5.56e-16,1;CL:0002041,5.56e-16,1;CL:0000791,6.15e-13,18;CL:0000789,6.15e-13,18;CL:0002420,6.15e-13,18;CL:0002419,6.15e-13,18;CL:0000790,6.15e-13,18;CL:0000625,3.79e-12,11;CL:0000236,7.95e-10,14;CL:0000084,2.16e-09,25;CL:0000827,2.16e-09,25;CL:0000893,1.20e-08,2;CL:0002489,1.20e-08,2;CL:0000809,1.20e-08,2;CL:0000808,1.20e-08,2;CL:0000894,1.20e-08,2;CL:0000806,1.20e-08,2;CL:0000807,1.20e-08,2;CL:0000805,1.20e-08,2;CL:0002425,1.20e-08,2;CL:0002087,3.90e-07,115;CL:0002031,8.29e-07,120|ontology_enrichment_development_v019=CL:0000790;5.77e-13;18!CL:0000051;1.17e-10;53!CL:0002425;1.20e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.17e-12!7;UBERON:0002390!1.02e-10!102;UBERON:0003061!1.02e-10!102;UBERON:0000178!5.29e-10!15;UBERON:0000179!5.29e-10!15;UBERON:0000463!5.29e-10!15;UBERON:0002193!8.70e-10!112;UBERON:0002370!4.81e-08!4;UBERON:0005058!4.81e-08!4;UBERON:0009113!4.81e-08!4;UBERON:0003295!4.81e-08!4;UBERON:0005562!4.81e-08!4|ontology_enrichment_uberon_v019=UBERON:0000178;3.59e-09;15!UBERON:0000179;3.59e-09;15!UBERON:0000463;3.59e-09;15|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.90e-09,15;UBERON:0000179,3.90e-09,15;UBERON:0000463,3.90e-09,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.164201178899891,0.236132343941038,0.786728553697808,0.383829398097213,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0,0.485168122375632,0,0.411167888021826,0,0.28769239232215,0,0,0.344745680736619,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0.426730222566507,1.60158394814405,0,1.98313461835459,0,1.70763890732835,0.587237189370939,0,0,0,0.263384084775077,0.196709770113833,0,0.411202997999018,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0.130059347559878,1.31550323682941,1.10540007114339,0.579606171470105,0.296573126324121,0.267540828089713,2.09071047609954,0.453237370790265,0.383220493601921,0.34362744548263,0.253019692019503,1.27426165729639,0.651083453856419,0.950452044448374,0.150575119077773,1.15187950038977,0,1.65744076430812,0.821127996921047,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.26800176769578,0.985153801009636,1.50939302401662,0.256686072559497,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0,0.714695326373367,0.411362273086194,0,1.62009431171434,0,0,0,0,0,0,0.142283686696828,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,4.789661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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:30818607..30818619,+ | |||
|id=chr10:30818607..30818619,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.39e-46!52;CL:0000542!1.79e-45!53;CL:0000051!1.79e-45!53;CL:0000738!7.50e-37!140;CL:0002087!7.09e-33!119;CL:0002031!2.83e-29!124;CL:0000037!3.38e-29!172;CL:0000566!3.38e-29!172;CL:0000988!1.24e-26!182;CL:0002032!6.96e-25!165;CL:0000837!6.96e-25!165;CL:0000084!1.03e-24!25;CL:0000827!1.03e-24!25;CL:0000791!1.48e-22!18;CL:0000789!1.48e-22!18;CL:0002420!1.48e-22!18;CL:0002419!1.48e-22!18;CL:0000790!1.48e-22!18;CL:0000945!9.02e-18!24;CL:0000826!9.02e-18!24;CL:0000625!2.14e-17!11;CL:0000236!9.42e-09!14;CL:0000623!3.60e-07!3;CL:0000825!3.60e-07!3;CL:0000767!7.16e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002127;5.55e-16;1!CL:0000911;5.55e-16;1!CL:0000814;5.55e-16;1!CL:0000791;5.77e-13;18!CL:0000789;5.77e-13;18!CL:0002419;5.77e-13;18!CL:0000625;3.51e-12;11!CL:0000542;1.17e-10;53!CL:0000236;2.13e-10;13!CL:0000084;2.07e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.08e-17,52;CL:0000542,1.73e-16,53;CL:0000051,1.73e-16,53;CL:0002127,5.56e-16,1;CL:0000914,5.56e-16,1;CL:0000911,5.56e-16,1;CL:0000814,5.56e-16,1;CL:0002042,5.56e-16,1;CL:0002039,5.56e-16,1;CL:0002040,5.56e-16,1;CL:0002041,5.56e-16,1;CL:0000791,6.15e-13,18;CL:0000789,6.15e-13,18;CL:0002420,6.15e-13,18;CL:0002419,6.15e-13,18;CL:0000790,6.15e-13,18;CL:0000625,3.79e-12,11;CL:0000236,7.95e-10,14;CL:0000084,2.16e-09,25;CL:0000827,2.16e-09,25;CL:0000893,1.20e-08,2;CL:0002489,1.20e-08,2;CL:0000809,1.20e-08,2;CL:0000808,1.20e-08,2;CL:0000894,1.20e-08,2;CL:0000806,1.20e-08,2;CL:0000807,1.20e-08,2;CL:0000805,1.20e-08,2;CL:0002425,1.20e-08,2;CL:0002087,3.90e-07,115;CL:0002031,8.29e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;5.77e-13;18!CL:0000051;1.17e-10;53!CL:0002425;1.20e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.17e-12!7;UBERON:0002390!1.02e-10!102;UBERON:0003061!1.02e-10!102;UBERON:0000178!5.29e-10!15;UBERON:0000179!5.29e-10!15;UBERON:0000463!5.29e-10!15;UBERON:0002193!8.70e-10!112;UBERON:0002370!4.81e-08!4;UBERON:0005058!4.81e-08!4;UBERON:0009113!4.81e-08!4;UBERON:0003295!4.81e-08!4;UBERON:0005562!4.81e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.59e-09;15!UBERON:0000179;3.59e-09;15!UBERON:0000463;3.59e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.90e-09,15;UBERON:0000179,3.90e-09,15;UBERON:0000463,3.90e-09,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.164201178899891,0.236132343941038,0.786728553697808,0.383829398097213,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0,0.485168122375632,0,0.411167888021826,0,0.28769239232215,0,0,0.344745680736619,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0.426730222566507,1.60158394814405,0,1.98313461835459,0,1.70763890732835,0.587237189370939,0,0,0,0.263384084775077,0.196709770113833,0,0.411202997999018,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0.130059347559878,1.31550323682941,1.10540007114339,0.579606171470105,0.296573126324121,0.267540828089713,2.09071047609954,0.453237370790265,0.383220493601921,0.34362744548263,0.253019692019503,1.27426165729639,0.651083453856419,0.950452044448374,0.150575119077773,1.15187950038977,0,1.65744076430812,0.821127996921047,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.26800176769578,0.985153801009636,1.50939302401662,0.256686072559497,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0,0.714695326373367,0.411362273086194,0,1.62009431171434,0,0,0,0,0,0,0.142283686696828,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.931406652723629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.327130788511688,0,0,0,0.59996218756479,0.320075189082423,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375935671919414,0.0644578879735772,0.399764623699716,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |||
|short_description=p@chr10:30818607..30818619,+ | |||
}} |
Revision as of 13:07, 10 September 2013
Short description: | p@chr10:30818607..30818619, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:30818607..30818619, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.08e-17 | 52 |
lymphocyte | 1.73e-16 | 53 |
common lymphoid progenitor | 1.73e-16 | 53 |
innate effector T cell | 5.56e-16 | 1 |
immature NK T cell | 5.56e-16 | 1 |
effector T cell | 5.56e-16 | 1 |
mature NK T cell | 5.56e-16 | 1 |
immature NK T cell stage IV | 5.56e-16 | 1 |
immature NK T cell stage I | 5.56e-16 | 1 |
immature NK T cell stage II | 5.56e-16 | 1 |
immature NK T cell stage III | 5.56e-16 | 1 |
mature alpha-beta T cell | 6.15e-13 | 18 |
alpha-beta T cell | 6.15e-13 | 18 |
immature T cell | 6.15e-13 | 18 |
mature T cell | 6.15e-13 | 18 |
immature alpha-beta T cell | 6.15e-13 | 18 |
CD8-positive, alpha-beta T cell | 3.79e-12 | 11 |
B cell | 7.95e-10 | 14 |
T cell | 2.16e-09 | 25 |
pro-T cell | 2.16e-09 | 25 |
thymocyte | 1.20e-08 | 2 |
double negative thymocyte | 1.20e-08 | 2 |
double-positive, alpha-beta thymocyte | 1.20e-08 | 2 |
DN4 thymocyte | 1.20e-08 | 2 |
DN1 thymic pro-T cell | 1.20e-08 | 2 |
DN2 thymocyte | 1.20e-08 | 2 |
DN3 thymocyte | 1.20e-08 | 2 |
immature single positive thymocyte | 1.20e-08 | 2 |
early T lineage precursor | 1.20e-08 | 2 |
nongranular leukocyte | 3.90e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 8.29e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 3.90e-09 | 15 |
haemolymphatic fluid | 3.90e-09 | 15 |
organism substance | 3.90e-09 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.