FFCP PHASE1:Hg19::chr10:31607702..31607755,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6935|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11642|TSSclassifier=S|UniProt=G3V1R3|association_with_transcript=0bp_to_ENST00000542879,ENST00000560196,uc010qee.1,uc010qef.1_5end|description=CAGE_peak_3_at_ZEB1_5end|id=chr10:31607702..31607755,+|ontology_enrichment_celltype=CL:0000057!1.39e-12!75;CL:0000055!2.29e-11!180;CL:0002139!2.97e-08!24;CL:0002620!3.16e-08!23;CL:0000136!5.45e-08!15;CL:0000071!6.74e-08!18;CL:0002546!6.74e-08!18;CL:0000048!9.62e-08!430;CL:0000723!7.37e-07!436|ontology_enrichment_celltype_v019=CL:0002620;8.48e-11;23!CL:0000136;2.82e-10;13!CL:0002139;1.59e-08;24!CL:0000071;4.56e-08;18!CL:1000413;5.30e-07;9!CL:0000115;5.90e-07;36|ontology_enrichment_celltype_v019_2=CL:0000057,4.81e-17,76;CL:0000136,6.26e-12,15;CL:0002620,4.78e-11,23;CL:0002139,1.89e-08,24;CL:0000048,2.56e-08,427;CL:0000071,5.37e-08,18;CL:0002546,5.37e-08,18;CL:0000723,8.14e-08,433;CL:0000115,9.03e-08,36;CL:0000034,3.54e-07,441;CL:0002078,6.32e-07,45;CL:1000413,6.90e-07,9|ontology_enrichment_development_v019=CL:0002546;4.56e-08;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001981!1.86e-10!60;UBERON:0007500!1.86e-10!60;UBERON:0004537!1.86e-10!60;UBERON:0006965!1.86e-10!60;UBERON:0000055!2.21e-10!69;UBERON:0002049!4.67e-10!79;UBERON:0007798!4.67e-10!79;UBERON:0000914!5.28e-10!83;UBERON:0002329!5.28e-10!83;UBERON:0003077!5.28e-10!83;UBERON:0003059!5.28e-10!83;UBERON:0007282!5.28e-10!83;UBERON:0009618!5.28e-10!83;UBERON:0007285!5.28e-10!83;UBERON:0004872!1.65e-09!84;UBERON:0004290!9.67e-09!70;UBERON:0001009!3.85e-08!113;UBERON:0001986!6.74e-08!18;UBERON:0004638!6.74e-08!18;UBERON:0004852!6.74e-08!18;UBERON:0004535!9.49e-08!110;UBERON:0000468!1.47e-07!659;UBERON:0004573!2.77e-07!33;UBERON:0004571!2.77e-07!33;UBERON:0000475!4.54e-07!365;UBERON:0000467!4.68e-07!625;UBERON:0000947!6.54e-07!21;UBERON:0010191!6.54e-07!21;UBERON:0000480!6.54e-07!626|ontology_enrichment_uberon_v019=UBERON:0006914;3.30e-08;25!UBERON:0004638;4.56e-08;18!UBERON:0001986;4.56e-08;18!UBERON:0004852;4.56e-08;18!UBERON:0002199;9.53e-08;46!UBERON:0002416;9.53e-08;46!UBERON:0000947;1.58e-07;21!UBERON:0010191;1.58e-07;21!UBERON:0002097;1.88e-07;41!UBERON:0003915;5.30e-07;9!UBERON:0004700;5.30e-07;9!UBERON:0001917;5.30e-07;9!UBERON:0000487;5.85e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.16e-11,46;UBERON:0002416,1.16e-11,46;UBERON:0003102,1.63e-10,99;UBERON:0002097,1.83e-09,41;UBERON:0007500,1.26e-08,59;UBERON:0001981,1.26e-08,59;UBERON:0004537,1.26e-08,59;UBERON:0006965,1.26e-08,59;UBERON:0000055,1.34e-08,68;UBERON:0006914,3.29e-08,25;UBERON:0004638,5.37e-08,18;UBERON:0001986,5.37e-08,18;UBERON:0004852,5.37e-08,18;UBERON:0002049,1.54e-07,78;UBERON:0007798,1.54e-07,78;UBERON:0000947,1.70e-07,21;UBERON:0010191,1.70e-07,21;UBERON:0000487,5.74e-07,22;UBERON:0004872,6.11e-07,83;UBERON:0003915,6.90e-07,9;UBERON:0004700,6.90e-07,9;UBERON:0001917,6.90e-07,9|phase1_expression=1.99846217197612,3.21150785836475,2.25527046553554,3.00219895059391,1.78784437770915,2.61701557230111,5.06599756336621,1.89515962028049,3.3954131665979,0,0,0,0,0.495065411840187,0,2.01697543935533,0,1.46062018077475,0.487932798790507,0,0,0,0,0,0.753255837568817,0.0764134057479513,0,0.157421562627358,0,0,0.154816123316076,0.919421224478927,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0.290796477559129,0.377875943688809,0,0.464858073811369,0.411167888021826,1.23882548358041,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0.564727018627814,2.18324920046277,0,0,1.92557416245656,0.639337125799041,0.329851300186716,0.398927315243264,0,0.290209238628584,2.26954089876456,0.622822248995575,0.502497330513487,1.0429658368404,0.65156653411535,1.21079900526674,2.20966581592539,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.764546456250458,0,0,0.526768169550154,0.393419540227666,2.35806457649499,0.822405995998037,0,0,0,0,0,0,0.443067789167242,0,0,0,0,0.552700035571697,0,0.14828656316206,0,1.04535523804977,0.113309342697566,0.383220493601921,0.34362744548263,0,0,0,0,0,0,0,0,0,0.403213486449465,1.06976078313403,0.579297615531196,4.87613732627923,0,0.12786256184353,5.06014813338393,2.00535164254356,1.44846518960824,0,0.486634870302636,0,0,0.087834785693126,0.654895377488563,0,0,0,0,0,0,0,0,1.98762407366705,3.4409383804245,1.04142150482278,6.21838736116411,1.25849830862972,1.10047216776027,2.08994966536811,3.10100111003195,1.42306505074684,2.34304428935269,0.402829317109147,0.760272105718513,0.24406205754817,2.94130464276695,0.81014194788176,1.3394959242612,2.91888184414021,2.59006405111641,4.5994991239765,0.949265659568129,2.01521918323448,0,3.87780264148325,0,0.496971951695318,1.01304409331664,2.38336525463794,2.0078563452417,1.77334191099179,0.560677600142307,0,0,0,0.67355336034844,1.47115712802113,0.908144565869588,1.15235184896,0,2.80944069147288,0,1.79338416662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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6935 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11642 | |||
|TSSclassifier=S | |||
|UniProt=G3V1R3 | |||
|association_with_transcript=0bp_to_ENST00000542879,ENST00000560196,uc010qee.1,uc010qef.1_5end | |||
|description=CAGE_peak_3_at_ZEB1_5end | |||
|id=chr10:31607702..31607755,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.39e-12!75;CL:0000055!2.29e-11!180;CL:0002139!2.97e-08!24;CL:0002620!3.16e-08!23;CL:0000136!5.45e-08!15;CL:0000071!6.74e-08!18;CL:0002546!6.74e-08!18;CL:0000048!9.62e-08!430;CL:0000723!7.37e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.48e-11;23!CL:0000136;2.82e-10;13!CL:0002139;1.59e-08;24!CL:0000071;4.56e-08;18!CL:1000413;5.30e-07;9!CL:0000115;5.90e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.81e-17,76;CL:0000136,6.26e-12,15;CL:0002620,4.78e-11,23;CL:0002139,1.89e-08,24;CL:0000048,2.56e-08,427;CL:0000071,5.37e-08,18;CL:0002546,5.37e-08,18;CL:0000723,8.14e-08,433;CL:0000115,9.03e-08,36;CL:0000034,3.54e-07,441;CL:0002078,6.32e-07,45;CL:1000413,6.90e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;4.56e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001981!1.86e-10!60;UBERON:0007500!1.86e-10!60;UBERON:0004537!1.86e-10!60;UBERON:0006965!1.86e-10!60;UBERON:0000055!2.21e-10!69;UBERON:0002049!4.67e-10!79;UBERON:0007798!4.67e-10!79;UBERON:0000914!5.28e-10!83;UBERON:0002329!5.28e-10!83;UBERON:0003077!5.28e-10!83;UBERON:0003059!5.28e-10!83;UBERON:0007282!5.28e-10!83;UBERON:0009618!5.28e-10!83;UBERON:0007285!5.28e-10!83;UBERON:0004872!1.65e-09!84;UBERON:0004290!9.67e-09!70;UBERON:0001009!3.85e-08!113;UBERON:0001986!6.74e-08!18;UBERON:0004638!6.74e-08!18;UBERON:0004852!6.74e-08!18;UBERON:0004535!9.49e-08!110;UBERON:0000468!1.47e-07!659;UBERON:0004573!2.77e-07!33;UBERON:0004571!2.77e-07!33;UBERON:0000475!4.54e-07!365;UBERON:0000467!4.68e-07!625;UBERON:0000947!6.54e-07!21;UBERON:0010191!6.54e-07!21;UBERON:0000480!6.54e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0006914;3.30e-08;25!UBERON:0004638;4.56e-08;18!UBERON:0001986;4.56e-08;18!UBERON:0004852;4.56e-08;18!UBERON:0002199;9.53e-08;46!UBERON:0002416;9.53e-08;46!UBERON:0000947;1.58e-07;21!UBERON:0010191;1.58e-07;21!UBERON:0002097;1.88e-07;41!UBERON:0003915;5.30e-07;9!UBERON:0004700;5.30e-07;9!UBERON:0001917;5.30e-07;9!UBERON:0000487;5.85e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.16e-11,46;UBERON:0002416,1.16e-11,46;UBERON:0003102,1.63e-10,99;UBERON:0002097,1.83e-09,41;UBERON:0007500,1.26e-08,59;UBERON:0001981,1.26e-08,59;UBERON:0004537,1.26e-08,59;UBERON:0006965,1.26e-08,59;UBERON:0000055,1.34e-08,68;UBERON:0006914,3.29e-08,25;UBERON:0004638,5.37e-08,18;UBERON:0001986,5.37e-08,18;UBERON:0004852,5.37e-08,18;UBERON:0002049,1.54e-07,78;UBERON:0007798,1.54e-07,78;UBERON:0000947,1.70e-07,21;UBERON:0010191,1.70e-07,21;UBERON:0000487,5.74e-07,22;UBERON:0004872,6.11e-07,83;UBERON:0003915,6.90e-07,9;UBERON:0004700,6.90e-07,9;UBERON:0001917,6.90e-07,9 | |||
|phase1_expression=1.99846217197612,3.21150785836475,2.25527046553554,3.00219895059391,1.78784437770915,2.61701557230111,5.06599756336621,1.89515962028049,3.3954131665979,0,0,0,0,0.495065411840187,0,2.01697543935533,0,1.46062018077475,0.487932798790507,0,0,0,0,0,0.753255837568817,0.0764134057479513,0,0.157421562627358,0,0,0.154816123316076,0.919421224478927,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0.290796477559129,0.377875943688809,0,0.464858073811369,0.411167888021826,1.23882548358041,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0.564727018627814,2.18324920046277,0,0,1.92557416245656,0.639337125799041,0.329851300186716,0.398927315243264,0,0.290209238628584,2.26954089876456,0.622822248995575,0.502497330513487,1.0429658368404,0.65156653411535,1.21079900526674,2.20966581592539,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.764546456250458,0,0,0.526768169550154,0.393419540227666,2.35806457649499,0.822405995998037,0,0,0,0,0,0,0.443067789167242,0,0,0,0,0.552700035571697,0,0.14828656316206,0,1.04535523804977,0.113309342697566,0.383220493601921,0.34362744548263,0,0,0,0,0,0,0,0,0,0.403213486449465,1.06976078313403,0.579297615531196,4.87613732627923,0,0.12786256184353,5.06014813338393,2.00535164254356,1.44846518960824,0,0.486634870302636,0,0,0.087834785693126,0.654895377488563,0,0,0,0,0,0,0,0,1.98762407366705,3.4409383804245,1.04142150482278,6.21838736116411,1.25849830862972,1.10047216776027,2.08994966536811,3.10100111003195,1.42306505074684,2.34304428935269,0.402829317109147,0.760272105718513,0.24406205754817,2.94130464276695,0.81014194788176,1.3394959242612,2.91888184414021,2.59006405111641,4.5994991239765,0.949265659568129,2.01521918323448,0,3.87780264148325,0,0.496971951695318,1.01304409331664,2.38336525463794,2.0078563452417,1.77334191099179,0.560677600142307,0,0,0,0.67355336034844,1.47115712802113,0.908144565869588,1.15235184896,0,2.80944069147288,0,1.79338416662161,0.704606991862589,2.10434827678571,1.54495887372473,4.28723759635276,0.859840221182376,8.78269139994006,15.4440371446667,10.3852110296994,0,0.718618141816238,1.17835279767846,0.625592599359821,5.26421819419948,2.63386572528503,2.45190236639216,3.60571341375832,0.226864366320042,1.4351170855109,4.48470516518992,5.51022943014861,1.50045548042201,4.01904864029912,2.06112432036503,2.04728541964749,2.53164498361899,1.75386609290158,0.504867548488229,4.51044503347267,6.30419621593366,0.355009592516614,1.30977727695932,0.339121184620975,0.193260853163297,0,0,0,0,0,0,0,0,1.56449532329816,5.78916844373597,1.38134921352481,8.35862270457562,5.77503585335668,0,0,0,0,0,0,0,0.196221465125346,0,2.95262181849859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0.117408694235822,0.144366447761074,0,0.570762456703795,0,0,0.246217006087397,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.190493682876507,0,0,0,0,0,0,0.112131084345361,0,0.8800594298514,0.646358578788889,3.57656445851882,0,0.797814349754612,2.08014873822732,0,2.83698264046557,0,0.857867961948885,2.17048642156577,0,0.325736184293735,0.710783897485092,0.791951872933429,0,0,0.099972991182057,0,0,0,0.479249710983165,0,7.13184525203592,8.68687840005475,4.31500277355805,4.47652408099739,0.224170287987055,0.197030760201927,1.50939302401662,0.128343036279748,3.30323011489202,1.30139853857622,0,0.167516265334349,0.637938751653163,0.749007023947182,0,0,0.49076596687656,0,0,1.24782516918484,2.14114786556594,2.05013139544115,3.74852527976682,1.80567659836631,2.27407504055985,2.0694614258501,0,1.10621501125022,3.38846096425523,0.195801157462741,1.37257369524342,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,2.23297027036899,0.767309866440312,1.40330047216537,2.05022638809122,1.53512174720011,0.804269605718038,0,0.616838775210622,1.06537035187876,1.8067974323038,0,1.51073491997947,0,0,0,0.803701137152247,1.0925470080403,2.49136388422906,0,0,0,0,0,2.27466768141793,2.04112446331819,0,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0.366277859273374,0.247528499761764,0,0,0,0.96670718292122,0.770243085573222,0.767518373630648,1.92971201478343,0.537101224341368,0.290033387828457,0.852266274161009,0.801288320820636,0,0,0,0,0.464845549297286,2.51849877464512,0.6970372701606,0.924100740528266,0,2.60979897622522,0.74129687641568,1.5743737541619,0.372158369359667,1.58189712359363,0.953150969619124,0.511795582622668,3.42351190427136,1.59101623962968,0.78494864019923,0.899362287916574,1.37268514868027,0.706874414074119,0.808729926293264,0,0,0,0.974853958525138,1.05650146756755,1.36499911407986,1.97967604735198,0,0.551365343546124,0,1.75380354101505,0,0.655894752046633,0,0,0,0.286822704408103,0.88424136911809,0.35667105148125,0.354761064070598,4.01104507065562,6.58589785919804,0,0.349934720244983,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0.187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| |||
|short_description=p3@ZEB1 | |||
}} |
Revision as of 13:10, 10 September 2013
Short description: | p3@ZEB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ZEB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000542879, ENST00000560196, uc010qee.1, uc010qef.1_5end |
EntrezGene: | ZEB1 |
HGNC: | 11642 |
UniProt: | G3V1R3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.81e-17 | 76 |
fat cell | 6.26e-12 | 15 |
skin fibroblast | 4.78e-11 | 23 |
endothelial cell of vascular tree | 1.89e-08 | 24 |
multi fate stem cell | 2.56e-08 | 427 |
blood vessel endothelial cell | 5.37e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.37e-08 | 18 |
somatic stem cell | 8.14e-08 | 433 |
endothelial cell | 9.03e-08 | 36 |
stem cell | 3.54e-07 | 441 |
meso-epithelial cell | 6.32e-07 | 45 |
endothelial cell of artery | 6.90e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
integument | 1.16e-11 | 46 |
integumental system | 1.16e-11 | 46 |
surface structure | 1.63e-10 | 99 |
skin of body | 1.83e-09 | 41 |
epithelial tube open at both ends | 1.26e-08 | 59 |
blood vessel | 1.26e-08 | 59 |
blood vasculature | 1.26e-08 | 59 |
vascular cord | 1.26e-08 | 59 |
vessel | 1.34e-08 | 68 |
squamous epithelium | 3.29e-08 | 25 |
blood vessel endothelium | 5.37e-08 | 18 |
endothelium | 5.37e-08 | 18 |
cardiovascular system endothelium | 5.37e-08 | 18 |
vasculature | 1.54e-07 | 78 |
vascular system | 1.54e-07 | 78 |
aorta | 1.70e-07 | 21 |
aortic system | 1.70e-07 | 21 |
simple squamous epithelium | 5.74e-07 | 22 |
splanchnic layer of lateral plate mesoderm | 6.11e-07 | 83 |
endothelial tube | 6.90e-07 | 9 |
arterial system endothelium | 6.90e-07 | 9 |
endothelium of artery | 6.90e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.