FFCP PHASE1:Hg19::chr11:122051315..122051326,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=-207bp_to_ENST00000533109_5end|coexpression_cluster_id=C1617|description=CAGE_peak_6_at_ENST00000533109_5end|id=chr11:122051315..122051326,-|ontology_enrichment_celltype=CL:0000055!1.71e-25!180;CL:0000057!5.74e-19!75;CL:0000222!6.33e-16!119;CL:0000144!3.40e-15!625;CL:0000548!3.41e-15!679;CL:0000004!3.41e-15!679;CL:0000255!3.41e-15!679;CL:0000012!8.91e-15!682;CL:0000680!5.69e-14!57;CL:0000056!5.69e-14!57;CL:0000355!5.69e-14!57;CL:0000220!2.79e-13!246;CL:0002371!3.42e-13!591;CL:0002321!6.63e-13!248;CL:0000183!2.96e-12!59;CL:0000187!3.38e-12!54;CL:0002620!2.92e-11!23;CL:0000192!5.59e-11!42;CL:0000514!5.59e-11!42;CL:0000359!7.63e-11!32;CL:0000003!2.56e-10!722;CL:0000393!1.05e-09!60;CL:0000211!1.05e-09!60|ontology_enrichment_celltype_v019=CL:0002556;2.69e-09;6!CL:1000306;6.60e-09;4!CL:0002547;6.60e-09;4!CL:0000057;1.40e-07;73|ontology_enrichment_celltype_v019_2=CL:0000057,3.75e-17,76;CL:0002556,2.27e-09,6;CL:1000306,7.41e-09,4;CL:0002547,7.41e-09,4;CL:0000680,3.66e-07,58;CL:0000056,3.66e-07,58;CL:0000355,3.66e-07,58|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!1.51e-20!83;UBERON:0002329!1.51e-20!83;UBERON:0003077!1.51e-20!83;UBERON:0003059!1.51e-20!83;UBERON:0007282!1.51e-20!83;UBERON:0009618!1.51e-20!83;UBERON:0007285!1.51e-20!83;UBERON:0002049!1.01e-17!79;UBERON:0007798!1.01e-17!79;UBERON:0000486!3.43e-17!82;UBERON:0004290!1.08e-15!70;UBERON:0001637!3.98e-15!42;UBERON:0003509!3.98e-15!42;UBERON:0004572!3.98e-15!42;UBERON:0000055!4.12e-13!69;UBERON:0001981!5.47e-13!60;UBERON:0007500!5.47e-13!60;UBERON:0004537!5.47e-13!60;UBERON:0006965!5.47e-13!60;UBERON:0004535!1.03e-12!110;UBERON:0001134!4.13e-12!61;UBERON:0002036!4.13e-12!61;UBERON:0003082!4.13e-12!61;UBERON:0004573!5.82e-12!33;UBERON:0004571!5.82e-12!33;UBERON:0001009!7.68e-12!113;UBERON:0004872!2.65e-11!84;UBERON:0002385!2.77e-11!63;UBERON:0001015!2.77e-11!63;UBERON:0000383!2.77e-11!63;UBERON:0000490!5.29e-11!138;UBERON:0000947!5.46e-11!21;UBERON:0010191!5.46e-11!21;UBERON:0003102!1.37e-10!95;UBERON:0005256!1.69e-10!143;UBERON:0002097!1.05e-09!40;UBERON:0000475!2.13e-09!365;UBERON:0000119!3.96e-09!312;UBERON:0002199!3.99e-09!45;UBERON:0002416!3.99e-09!45;UBERON:0000483!2.38e-08!309;UBERON:0002100!7.17e-08!216;UBERON:0001801!2.89e-07!14;UBERON:0003914!3.60e-07!118|ontology_enrichment_uberon_v019=UBERON:0000947;2.49e-09;21!UBERON:0010191;2.49e-09;21!UBERON:0001758;2.69e-09;6!UBERON:0003672;2.69e-09;6!UBERON:0004797;6.60e-09;4!UBERON:0000415;6.60e-09;4!UBERON:0007240;6.60e-09;4!UBERON:0005742;6.60e-09;4!UBERON:0005734;6.60e-09;4!UBERON:0004664;6.60e-09;4!UBERON:0004663;6.60e-09;4!UBERON:0003129;6.94e-08;7!UBERON:0000075;3.00e-07;16!UBERON:0004573;4.68e-07;33!UBERON:0004571;4.68e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0000486,9.63e-10,83;UBERON:0000947,1.27e-09,21;UBERON:0010191,1.27e-09,21;UBERON:0001758,2.27e-09,6;UBERON:0003672,2.27e-09,6;UBERON:0002329,2.47e-09,71;UBERON:0003059,2.47e-09,71;UBERON:0007282,2.47e-09,71;UBERON:0004290,2.47e-09,71;UBERON:0009618,2.47e-09,71;UBERON:0001637,2.80e-09,42;UBERON:0003509,2.80e-09,42;UBERON:0004572,2.80e-09,42;UBERON:0003077,4.03e-09,72;UBERON:0007285,4.03e-09,72;UBERON:0007524,6.48e-09,73;UBERON:0000415,7.41e-09,4;UBERON:0007240,7.41e-09,4;UBERON:0005742,7.41e-09,4;UBERON:0005734,7.41e-09,4;UBERON:0004664,7.41e-09,4;UBERON:0004663,7.41e-09,4;UBERON:0007503,5.73e-08,78;UBERON:0003129,6.01e-08,7;UBERON:0004573,1.35e-07,33;UBERON:0004571,1.35e-07,33;UBERON:0003102,1.49e-07,99;UBERON:0002049,1.69e-07,78;UBERON:0007798,1.69e-07,78;UBERON:0000075,2.66e-07,16;UBERON:0002097,2.83e-07,41;UBERON:0002199,4.76e-07,46;UBERON:0002416,4.76e-07,46|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,1.74467704820074,0,0,0,0.245733936501509,0,0,0,2.10402800032079,0.994192127183747,1.34465029290355,0.602694528023977,0.730310090387373,1.46379839637152,0.369363174230364,0,0,0.286235987131057,0.410623275218653,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51255707462509,1.55210578223795,0.702678285545008,0,0.728590576585084,0,0,0,0,0,0,0,0.79504962946682,0,0.347140501607594,1.69592382577203,0.419499436209906,0.275118041940067,0.835979866147242,0.516833518338658,0.35576626268671,0.33472061276467,0,0,0,0.367663080345869,1.62028389576352,0.267899184852239,0.22452937262617,0.225222960966644,1.53316637465883,0,0.183201743930407,0,0,0,0,1.2663051166458,11.3871895499368,6.02356903572509,1.41867352879343,1.12135520028461,0,0,1.8672662123986,0.404132016209064,0.653847612453835,0,0.576175924479999,0.468642863667593,0.936480230490962,0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715692,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0.672791175483681,0,0,0,0,0,0,0,0,1.06727345877715,1.9307228228694,0.808426818959282,0,0,0,0,0,0|short_description=p6@ENST00000533109}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-207bp_to_ENST00000533109_5end | |||
|coexpression_cluster_id=C1617 | |||
|description=CAGE_peak_6_at_ENST00000533109_5end | |||
|id=chr11:122051315..122051326,- | |||
|ontology_enrichment_celltype=CL:0000055!1.71e-25!180;CL:0000057!5.74e-19!75;CL:0000222!6.33e-16!119;CL:0000144!3.40e-15!625;CL:0000548!3.41e-15!679;CL:0000004!3.41e-15!679;CL:0000255!3.41e-15!679;CL:0000012!8.91e-15!682;CL:0000680!5.69e-14!57;CL:0000056!5.69e-14!57;CL:0000355!5.69e-14!57;CL:0000220!2.79e-13!246;CL:0002371!3.42e-13!591;CL:0002321!6.63e-13!248;CL:0000183!2.96e-12!59;CL:0000187!3.38e-12!54;CL:0002620!2.92e-11!23;CL:0000192!5.59e-11!42;CL:0000514!5.59e-11!42;CL:0000359!7.63e-11!32;CL:0000003!2.56e-10!722;CL:0000393!1.05e-09!60;CL:0000211!1.05e-09!60 | |||
|ontology_enrichment_celltype_v019=CL:0002556;2.69e-09;6!CL:1000306;6.60e-09;4!CL:0002547;6.60e-09;4!CL:0000057;1.40e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.75e-17,76;CL:0002556,2.27e-09,6;CL:1000306,7.41e-09,4;CL:0002547,7.41e-09,4;CL:0000680,3.66e-07,58;CL:0000056,3.66e-07,58;CL:0000355,3.66e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.51e-20!83;UBERON:0002329!1.51e-20!83;UBERON:0003077!1.51e-20!83;UBERON:0003059!1.51e-20!83;UBERON:0007282!1.51e-20!83;UBERON:0009618!1.51e-20!83;UBERON:0007285!1.51e-20!83;UBERON:0002049!1.01e-17!79;UBERON:0007798!1.01e-17!79;UBERON:0000486!3.43e-17!82;UBERON:0004290!1.08e-15!70;UBERON:0001637!3.98e-15!42;UBERON:0003509!3.98e-15!42;UBERON:0004572!3.98e-15!42;UBERON:0000055!4.12e-13!69;UBERON:0001981!5.47e-13!60;UBERON:0007500!5.47e-13!60;UBERON:0004537!5.47e-13!60;UBERON:0006965!5.47e-13!60;UBERON:0004535!1.03e-12!110;UBERON:0001134!4.13e-12!61;UBERON:0002036!4.13e-12!61;UBERON:0003082!4.13e-12!61;UBERON:0004573!5.82e-12!33;UBERON:0004571!5.82e-12!33;UBERON:0001009!7.68e-12!113;UBERON:0004872!2.65e-11!84;UBERON:0002385!2.77e-11!63;UBERON:0001015!2.77e-11!63;UBERON:0000383!2.77e-11!63;UBERON:0000490!5.29e-11!138;UBERON:0000947!5.46e-11!21;UBERON:0010191!5.46e-11!21;UBERON:0003102!1.37e-10!95;UBERON:0005256!1.69e-10!143;UBERON:0002097!1.05e-09!40;UBERON:0000475!2.13e-09!365;UBERON:0000119!3.96e-09!312;UBERON:0002199!3.99e-09!45;UBERON:0002416!3.99e-09!45;UBERON:0000483!2.38e-08!309;UBERON:0002100!7.17e-08!216;UBERON:0001801!2.89e-07!14;UBERON:0003914!3.60e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0000947;2.49e-09;21!UBERON:0010191;2.49e-09;21!UBERON:0001758;2.69e-09;6!UBERON:0003672;2.69e-09;6!UBERON:0004797;6.60e-09;4!UBERON:0000415;6.60e-09;4!UBERON:0007240;6.60e-09;4!UBERON:0005742;6.60e-09;4!UBERON:0005734;6.60e-09;4!UBERON:0004664;6.60e-09;4!UBERON:0004663;6.60e-09;4!UBERON:0003129;6.94e-08;7!UBERON:0000075;3.00e-07;16!UBERON:0004573;4.68e-07;33!UBERON:0004571;4.68e-07;33 | |||
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| |||
|short_description=p6@ENST00000533109 | |||
}} |
Revision as of 16:17, 10 September 2013
Short description: | p6@ENST00000533109 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_ENST00000533109_5end |
Coexpression cluster: | C1617_Fibroblast_meningioma_giant_Smooth_mesenchymal_hepatic_Olfactory |
Association with transcript: | -207bp_to_ENST00000533109_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.75e-17 | 76 |
fibroblast of periodontium | 2.27e-09 | 6 |
fibroblast of tunica adventitia of artery | 7.41e-09 | 4 |
fibroblast of the aortic adventitia | 7.41e-09 | 4 |
muscle precursor cell | 3.66e-07 | 58 |
myoblast | 3.66e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.66e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 9.63e-10 | 83 |
aorta | 1.27e-09 | 21 |
aortic system | 1.27e-09 | 21 |
periodontium | 2.27e-09 | 6 |
dentition | 2.27e-09 | 6 |
somite | 2.47e-09 | 71 |
presomitic mesoderm | 2.47e-09 | 71 |
presumptive segmental plate | 2.47e-09 | 71 |
dermomyotome | 2.47e-09 | 71 |
trunk paraxial mesoderm | 2.47e-09 | 71 |
artery | 2.80e-09 | 42 |
arterial blood vessel | 2.80e-09 | 42 |
arterial system | 2.80e-09 | 42 |
paraxial mesoderm | 4.03e-09 | 72 |
presumptive paraxial mesoderm | 4.03e-09 | 72 |
dense mesenchyme tissue | 6.48e-09 | 73 |
artery wall | 7.41e-09 | 4 |
tunica adventitia of artery | 7.41e-09 | 4 |
adventitia | 7.41e-09 | 4 |
tunica adventitia of blood vessel | 7.41e-09 | 4 |
aorta tunica adventitia | 7.41e-09 | 4 |
aorta wall | 7.41e-09 | 4 |
epithelial vesicle | 5.73e-08 | 78 |
skull | 6.01e-08 | 7 |
systemic artery | 1.35e-07 | 33 |
systemic arterial system | 1.35e-07 | 33 |
surface structure | 1.49e-07 | 99 |
vasculature | 1.69e-07 | 78 |
vascular system | 1.69e-07 | 78 |
subdivision of skeletal system | 2.66e-07 | 16 |
skin of body | 2.83e-07 | 41 |
integument | 4.76e-07 | 46 |
integumental system | 4.76e-07 | 46 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.