FFCP PHASE1:Hg19::chr11:128562372..128562397,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2313|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3749|TSSclassifier=S|UniProt=Q01543|association_with_transcript=0bp_to_ENST00000344954_5end|description=CAGE_peak_4_at_FLI1_5end|id=chr11:128562372..128562397,+|ontology_enrichment_celltype=CL:0002139!4.92e-20!24;CL:0000071!4.92e-16!18;CL:0002546!4.92e-16!18;CL:0000115!3.06e-15!35;CL:0002078!2.57e-10!44;CL:0000213!5.41e-09!57;CL:0000215!5.41e-09!57;CL:1000413!8.09e-09!9;CL:0002544!4.84e-08!6;CL:0000222!2.13e-07!119|ontology_enrichment_celltype_v019=CL:0002139;1.28e-48;24!CL:0000071;4.47e-37;18!CL:0000115;3.90e-29;36!CL:1000413;1.40e-25;9!CL:0002544;4.56e-20;6!CL:0002078;1.04e-16;45!CL:0002618;3.11e-16;3!CL:0000213;1.19e-14;58!CL:0000215;1.19e-14;58!CL:0002543;9.92e-14;6!CL:0002138;5.40e-13;6!CL:0002548;9.80e-13;6!CL:0002494;5.02e-10;16!CL:0000746;3.41e-07;3|ontology_enrichment_celltype_v019_2=CL:0002139,6.77e-49,24;CL:0000071,2.76e-37,18;CL:0002546,2.76e-37,18;CL:0000115,9.94e-36,36;CL:0002078,8.62e-28,45;CL:1000413,1.06e-25,9;CL:0000213,1.12e-20,58;CL:0000215,1.12e-20,58;CL:0002544,3.48e-20,6;CL:0002618,2.31e-16,3;CL:0000222,1.67e-14,121;CL:0002543,7.45e-14,6;CL:0005020,4.64e-13,6;CL:0002138,4.64e-13,6;CL:0005022,4.64e-13,6;CL:0002548,1.08e-12,6;CL:0002494,6.47e-10,16;CL:0000076,7.34e-09,63;CL:0000746,4.99e-07,3;CL:0000513,4.99e-07,3|ontology_enrichment_development_v019=CL:0002546;4.47e-37;18!CL:0005022;5.40e-13;6!CL:0000513;3.41e-07;3!CL:0000222;4.02e-07;121|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000055!3.73e-26!69;UBERON:0004872!3.25e-25!84;UBERON:0001981!3.64e-24!60;UBERON:0007500!3.64e-24!60;UBERON:0004537!3.64e-24!60;UBERON:0006965!3.64e-24!60;UBERON:0002049!2.25e-23!79;UBERON:0007798!2.25e-23!79;UBERON:0001009!1.06e-19!113;UBERON:0004111!2.74e-19!241;UBERON:0004535!5.38e-19!110;UBERON:0000025!2.69e-17!194;UBERON:0000477!3.14e-17!286;UBERON:0001986!4.92e-16!18;UBERON:0004638!4.92e-16!18;UBERON:0004852!4.92e-16!18;UBERON:0007023!6.34e-16!115;UBERON:0001637!5.80e-14!42;UBERON:0003509!5.80e-14!42;UBERON:0004572!5.80e-14!42;UBERON:0003914!8.55e-13!118;UBERON:0000487!5.41e-12!22;UBERON:0004573!3.76e-11!33;UBERON:0004571!3.76e-11!33;UBERON:0000119!4.75e-10!312;UBERON:0006914!7.51e-10!25;UBERON:0000483!1.33e-09!309;UBERON:0000947!4.73e-09!21;UBERON:0010191!4.73e-09!21;UBERON:0003915!8.09e-09!9;UBERON:0004700!8.09e-09!9;UBERON:0001917!8.09e-09!9;UBERON:0001049!1.32e-07!57;UBERON:0005068!1.32e-07!57;UBERON:0006241!1.32e-07!57;UBERON:0007135!1.32e-07!57;UBERON:0003075!1.65e-07!86;UBERON:0007284!1.65e-07!86;UBERON:0002346!3.12e-07!90;UBERON:0003513!4.84e-07!8;UBERON:0000468!5.53e-07!659|ontology_enrichment_uberon_v019=UBERON:0004638;4.47e-37;18!UBERON:0001986;4.47e-37;18!UBERON:0004852;4.47e-37;18!UBERON:0000487;7.14e-30;22!UBERON:0006914;5.55e-26;25!UBERON:0003915;1.40e-25;9!UBERON:0004700;1.40e-25;9!UBERON:0001917;1.40e-25;9!UBERON:0000490;8.05e-17;33!UBERON:0000055;2.17e-14;65!UBERON:0007500;3.90e-12;56!UBERON:0001981;3.90e-12;56!UBERON:0004537;3.90e-12;56!UBERON:0002049;1.08e-10;75!UBERON:0007798;1.08e-10;75!UBERON:0002066;6.39e-10;5!UBERON:0001473;9.00e-10;8!UBERON:0004536;9.00e-10;8!UBERON:0006558;9.00e-10;8!UBERON:0001637;2.75e-09;42!UBERON:0003509;2.75e-09;42!UBERON:0004572;2.75e-09;42!UBERON:0001638;3.57e-09;9!UBERON:0003920;3.57e-09;9!UBERON:0004582;3.57e-09;9!UBERON:0004573;3.11e-08;33!UBERON:0004571;3.11e-08;33!UBERON:0001009;5.84e-08;112!UBERON:0002465;7.84e-08;10!UBERON:0000947;1.05e-07;21!UBERON:0010191;1.05e-07;21!UBERON:0003914;1.19e-07;74!UBERON:0004535;1.34e-07;109!UBERON:0002106;3.41e-07;3!UBERON:0000948;3.92e-07;22!UBERON:0003513;6.81e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.76e-37,18;UBERON:0001986,2.76e-37,18;UBERON:0004852,2.76e-37,18;UBERON:0000487,4.84e-30,22;UBERON:0004872,2.86e-28,83;UBERON:0006914,3.95e-26,25;UBERON:0003915,1.06e-25,9;UBERON:0004700,1.06e-25,9;UBERON:0001917,1.06e-25,9;UBERON:0000055,2.24e-24,68;UBERON:0004535,2.99e-24,109;UBERON:0001009,1.92e-23,112;UBERON:0002049,1.19e-20,78;UBERON:0007798,1.19e-20,78;UBERON:0007500,6.35e-18,59;UBERON:0001981,6.35e-18,59;UBERON:0004537,6.35e-18,59;UBERON:0006965,6.35e-18,59;UBERON:0003914,4.50e-15,117;UBERON:0002066,5.37e-10,5;UBERON:0001473,8.04e-10,8;UBERON:0004536,8.04e-10,8;UBERON:0006558,8.04e-10,8;UBERON:0001637,8.92e-10,42;UBERON:0003509,8.92e-10,42;UBERON:0004572,8.92e-10,42;UBERON:0004111,1.46e-09,240;UBERON:0003081,2.92e-09,203;UBERON:0001638,2.96e-09,9;UBERON:0003920,2.96e-09,9;UBERON:0004582,2.96e-09,9;UBERON:0004573,2.87e-08,33;UBERON:0004571,2.87e-08,33;UBERON:0000025,3.87e-08,192;UBERON:0002465,7.17e-08,10;UBERON:0000947,8.47e-08,21;UBERON:0010191,8.47e-08,21;UBERON:0000490,1.22e-07,148;UBERON:0002106,2.26e-07,3;UBERON:0004854,2.26e-07,3;UBERON:0009034,2.26e-07,3;UBERON:0002095,2.26e-07,3;UBERON:0004782,2.26e-07,3;UBERON:0003281,2.26e-07,3;UBERON:0009664,2.26e-07,3;UBERON:0002296,2.26e-07,3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2313 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3749 | |||
|TSSclassifier=S | |||
|UniProt=Q01543 | |||
|association_with_transcript=0bp_to_ENST00000344954_5end | |||
|description=CAGE_peak_4_at_FLI1_5end | |||
|id=chr11:128562372..128562397,+ | |||
|ontology_enrichment_celltype=CL:0002139!4.92e-20!24;CL:0000071!4.92e-16!18;CL:0002546!4.92e-16!18;CL:0000115!3.06e-15!35;CL:0002078!2.57e-10!44;CL:0000213!5.41e-09!57;CL:0000215!5.41e-09!57;CL:1000413!8.09e-09!9;CL:0002544!4.84e-08!6;CL:0000222!2.13e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.28e-48;24!CL:0000071;4.47e-37;18!CL:0000115;3.90e-29;36!CL:1000413;1.40e-25;9!CL:0002544;4.56e-20;6!CL:0002078;1.04e-16;45!CL:0002618;3.11e-16;3!CL:0000213;1.19e-14;58!CL:0000215;1.19e-14;58!CL:0002543;9.92e-14;6!CL:0002138;5.40e-13;6!CL:0002548;9.80e-13;6!CL:0002494;5.02e-10;16!CL:0000746;3.41e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.77e-49,24;CL:0000071,2.76e-37,18;CL:0002546,2.76e-37,18;CL:0000115,9.94e-36,36;CL:0002078,8.62e-28,45;CL:1000413,1.06e-25,9;CL:0000213,1.12e-20,58;CL:0000215,1.12e-20,58;CL:0002544,3.48e-20,6;CL:0002618,2.31e-16,3;CL:0000222,1.67e-14,121;CL:0002543,7.45e-14,6;CL:0005020,4.64e-13,6;CL:0002138,4.64e-13,6;CL:0005022,4.64e-13,6;CL:0002548,1.08e-12,6;CL:0002494,6.47e-10,16;CL:0000076,7.34e-09,63;CL:0000746,4.99e-07,3;CL:0000513,4.99e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;4.47e-37;18!CL:0005022;5.40e-13;6!CL:0000513;3.41e-07;3!CL:0000222;4.02e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!3.73e-26!69;UBERON:0004872!3.25e-25!84;UBERON:0001981!3.64e-24!60;UBERON:0007500!3.64e-24!60;UBERON:0004537!3.64e-24!60;UBERON:0006965!3.64e-24!60;UBERON:0002049!2.25e-23!79;UBERON:0007798!2.25e-23!79;UBERON:0001009!1.06e-19!113;UBERON:0004111!2.74e-19!241;UBERON:0004535!5.38e-19!110;UBERON:0000025!2.69e-17!194;UBERON:0000477!3.14e-17!286;UBERON:0001986!4.92e-16!18;UBERON:0004638!4.92e-16!18;UBERON:0004852!4.92e-16!18;UBERON:0007023!6.34e-16!115;UBERON:0001637!5.80e-14!42;UBERON:0003509!5.80e-14!42;UBERON:0004572!5.80e-14!42;UBERON:0003914!8.55e-13!118;UBERON:0000487!5.41e-12!22;UBERON:0004573!3.76e-11!33;UBERON:0004571!3.76e-11!33;UBERON:0000119!4.75e-10!312;UBERON:0006914!7.51e-10!25;UBERON:0000483!1.33e-09!309;UBERON:0000947!4.73e-09!21;UBERON:0010191!4.73e-09!21;UBERON:0003915!8.09e-09!9;UBERON:0004700!8.09e-09!9;UBERON:0001917!8.09e-09!9;UBERON:0001049!1.32e-07!57;UBERON:0005068!1.32e-07!57;UBERON:0006241!1.32e-07!57;UBERON:0007135!1.32e-07!57;UBERON:0003075!1.65e-07!86;UBERON:0007284!1.65e-07!86;UBERON:0002346!3.12e-07!90;UBERON:0003513!4.84e-07!8;UBERON:0000468!5.53e-07!659 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.76e-37,18;UBERON:0001986,2.76e-37,18;UBERON:0004852,2.76e-37,18;UBERON:0000487,4.84e-30,22;UBERON:0004872,2.86e-28,83;UBERON:0006914,3.95e-26,25;UBERON:0003915,1.06e-25,9;UBERON:0004700,1.06e-25,9;UBERON:0001917,1.06e-25,9;UBERON:0000055,2.24e-24,68;UBERON:0004535,2.99e-24,109;UBERON:0001009,1.92e-23,112;UBERON:0002049,1.19e-20,78;UBERON:0007798,1.19e-20,78;UBERON:0007500,6.35e-18,59;UBERON:0001981,6.35e-18,59;UBERON:0004537,6.35e-18,59;UBERON:0006965,6.35e-18,59;UBERON:0003914,4.50e-15,117;UBERON:0002066,5.37e-10,5;UBERON:0001473,8.04e-10,8;UBERON:0004536,8.04e-10,8;UBERON:0006558,8.04e-10,8;UBERON:0001637,8.92e-10,42;UBERON:0003509,8.92e-10,42;UBERON:0004572,8.92e-10,42;UBERON:0004111,1.46e-09,240;UBERON:0003081,2.92e-09,203;UBERON:0001638,2.96e-09,9;UBERON:0003920,2.96e-09,9;UBERON:0004582,2.96e-09,9;UBERON:0004573,2.87e-08,33;UBERON:0004571,2.87e-08,33;UBERON:0000025,3.87e-08,192;UBERON:0002465,7.17e-08,10;UBERON:0000947,8.47e-08,21;UBERON:0010191,8.47e-08,21;UBERON:0000490,1.22e-07,148;UBERON:0002106,2.26e-07,3;UBERON:0004854,2.26e-07,3;UBERON:0009034,2.26e-07,3;UBERON:0002095,2.26e-07,3;UBERON:0004782,2.26e-07,3;UBERON:0003281,2.26e-07,3;UBERON:0009664,2.26e-07,3;UBERON:0002296,2.26e-07,3;UBERON:0005602,2.26e-07,3;UBERON:0001179,2.26e-07,3;UBERON:0006293,2.26e-07,3;UBERON:0003513,4.93e-07,7 | |||
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| |||
|short_description=p4@FLI1 | |||
}} |
Revision as of 16:36, 10 September 2013
Short description: | p4@FLI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_FLI1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000344954_5end |
EntrezGene: | FLI1 |
HGNC: | 3749 |
UniProt: | Q01543 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.77e-49 | 24 |
blood vessel endothelial cell | 2.76e-37 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.76e-37 | 18 |
endothelial cell | 9.94e-36 | 36 |
meso-epithelial cell | 8.62e-28 | 45 |
endothelial cell of artery | 1.06e-25 | 9 |
lining cell | 1.12e-20 | 58 |
barrier cell | 1.12e-20 | 58 |
aortic endothelial cell | 3.48e-20 | 6 |
endothelial cell of umbilical vein | 2.31e-16 | 3 |
mesodermal cell | 1.67e-14 | 121 |
vein endothelial cell | 7.45e-14 | 6 |
lymphangioblast | 4.64e-13 | 6 |
endothelial cell of lymphatic vessel | 4.64e-13 | 6 |
vascular lymphangioblast | 4.64e-13 | 6 |
cardiac fibroblast | 1.08e-12 | 6 |
cardiocyte | 6.47e-10 | 16 |
squamous epithelial cell | 7.34e-09 | 63 |
cardiac muscle cell | 4.99e-07 | 3 |
cardiac muscle myoblast | 4.99e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.