FFCP PHASE1:Hg19::chr11:65122216..65122236,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=220359|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18334|TSSclassifier=S|UniProt=Q6B0B8|association_with_transcript=-1bp_to_ENST00000309880_5end|description=CAGE_peak_1_at_TIGD3_5end|id=chr11:65122216..65122236,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000094;9.52e-20;8!CL:0000775;1.26e-19;3!CL:0000081;2.62e-14;11!CL:0000771;7.53e-14;2!CL:0000784;3.37e-09;3!CL:0000037;2.49e-07;1!CL:0001024;2.49e-07;1|ontology_enrichment_celltype_v019_2=CL:0000094,9.05e-20,8;CL:0000775,1.31e-19,3;CL:0000081,2.53e-14,11;CL:0000771,6.67e-14,2;CL:0000784,4.68e-09,3;CL:0001024,3.20e-07,1|ontology_enrichment_development_v019=UBERON:0006215;1.35e-18;3|ontology_enrichment_disease=DOID:0050687!9.77e-09!143;DOID:162!8.84e-08!235;DOID:14566!1.23e-07!239;DOID:305!7.66e-07!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.97e-12!82;UBERON:0000073!7.35e-12!94;UBERON:0001016!7.35e-12!94;UBERON:0005743!2.11e-11!86;UBERON:0001049!2.15e-11!57;UBERON:0005068!2.15e-11!57;UBERON:0006241!2.15e-11!57;UBERON:0007135!2.15e-11!57;UBERON:0007023!2.21e-11!115;UBERON:0000955!1.39e-10!69;UBERON:0006238!1.39e-10!69;UBERON:0002616!4.81e-09!59;UBERON:0002346!1.71e-08!90;UBERON:0003080!2.76e-08!42;UBERON:0002780!9.96e-08!41;UBERON:0001890!9.96e-08!41;UBERON:0006240!9.96e-08!41;UBERON:0003075!3.29e-07!86;UBERON:0007284!3.29e-07!86|ontology_enrichment_uberon_v019=UBERON:0000178;2.58e-14;15!UBERON:0000179;2.58e-14;15!UBERON:0000463;2.58e-14;15!UBERON:0002390;5.71e-10;32!UBERON:0002037;1.44e-09;6!UBERON:0004733;3.53e-08;12!UBERON:0002028;3.53e-08;12!UBERON:0004732;1.48e-07;13|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.15e-14,15;UBERON:0000179,2.15e-14,15;UBERON:0000463,2.15e-14,15;UBERON:0002037,1.11e-09,6;UBERON:0006215,1.11e-09,6;UBERON:0004733,3.27e-08,12;UBERON:0002028,3.27e-08,12;UBERON:0007277,3.27e-08,12;UBERON:0004732,1.38e-07,13|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0.229240217243854,0.246301768349837,0.157421562627358,0,0,0,0,0,0,0.154934401160603,0,1.17440175733939,0,0,0.217010870715852,0,0,0,0.290796477559129,0,0.485168122375632,0,0,0.309706370895104,0.28769239232215,0,0.47296445977717,0,0,0,0,0,0,0,0,1.27867425159808,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0.336985893439485,0.300353785683013,0,0.570025487482497,0.59675003159727,0.182664153764634,0,0,0.889509253863555,0.426730222566507,0.400395987036012,0.574752439954483,0.661044872784862,0.954053754535364,0.569212969109448,0,0.382273228125229,5.28685314316103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390178042679635,0,0,0,0.593146252648242,0,1.04535523804977,0.113309342697566,0,0.34362744548263,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0.534880391567015,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.523916301990851,0,0,0,0.174129737299267,0,2.14641561874808,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0.55146986366197,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0.414656231081544,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.197030760201927,0.215627574859517,0.128343036279748,0,1.30139853857622,1.54657762555539,0.335032530668698,0,3.74503511973591,5.9832291840805,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.426910231213777,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.483437798366489,0,0,0,0,0.131124414959424,0.451199612907412,0,0,0,0,0,0,0,0,0,0.501689773854853,0,1.66215201785745,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,2.29391162142713,2.84823593587081,1.90585420366231,0.411362273086194,0.648473311192717,0.540031437238115,1.58625035258854,0,0.962479855263359,0,0.557409525377156,0,0.426851060090485,0,0,0.191505370132367,0,0,0,0.456469358066384,0,0,0.169291777801603,0,0,0.425846237690326,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0.561421621224659,0,0.121360521749513,0.222886768554957,0,0.47748896947538,0,0,0,0.140669416410513,0.222617410045812,0,0.844501632511974,0.19924798825107,0,0.503865495708552,0.409074730008619,0,0,0.179736702294654,0,0,0,2.3948309234694,0,0,0.74214478529481,0,0,0.087459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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=220359 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18334 | |||
|TSSclassifier=S | |||
|UniProt=Q6B0B8 | |||
|association_with_transcript=-1bp_to_ENST00000309880_5end | |||
|description=CAGE_peak_1_at_TIGD3_5end | |||
|id=chr11:65122216..65122236,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000094;9.52e-20;8!CL:0000775;1.26e-19;3!CL:0000081;2.62e-14;11!CL:0000771;7.53e-14;2!CL:0000784;3.37e-09;3!CL:0000037;2.49e-07;1!CL:0001024;2.49e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,9.05e-20,8;CL:0000775,1.31e-19,3;CL:0000081,2.53e-14,11;CL:0000771,6.67e-14,2;CL:0000784,4.68e-09,3;CL:0001024,3.20e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.35e-18;3 | |||
|ontology_enrichment_disease=DOID:0050687!9.77e-09!143;DOID:162!8.84e-08!235;DOID:14566!1.23e-07!239;DOID:305!7.66e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.97e-12!82;UBERON:0000073!7.35e-12!94;UBERON:0001016!7.35e-12!94;UBERON:0005743!2.11e-11!86;UBERON:0001049!2.15e-11!57;UBERON:0005068!2.15e-11!57;UBERON:0006241!2.15e-11!57;UBERON:0007135!2.15e-11!57;UBERON:0007023!2.21e-11!115;UBERON:0000955!1.39e-10!69;UBERON:0006238!1.39e-10!69;UBERON:0002616!4.81e-09!59;UBERON:0002346!1.71e-08!90;UBERON:0003080!2.76e-08!42;UBERON:0002780!9.96e-08!41;UBERON:0001890!9.96e-08!41;UBERON:0006240!9.96e-08!41;UBERON:0003075!3.29e-07!86;UBERON:0007284!3.29e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.58e-14;15!UBERON:0000179;2.58e-14;15!UBERON:0000463;2.58e-14;15!UBERON:0002390;5.71e-10;32!UBERON:0002037;1.44e-09;6!UBERON:0004733;3.53e-08;12!UBERON:0002028;3.53e-08;12!UBERON:0004732;1.48e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.15e-14,15;UBERON:0000179,2.15e-14,15;UBERON:0000463,2.15e-14,15;UBERON:0002037,1.11e-09,6;UBERON:0006215,1.11e-09,6;UBERON:0004733,3.27e-08,12;UBERON:0002028,3.27e-08,12;UBERON:0007277,3.27e-08,12;UBERON:0004732,1.38e-07,13 | |||
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| |||
|short_description=p1@TIGD3 | |||
}} |
Revision as of 18:54, 10 September 2013
Short description: | p1@TIGD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TIGD3_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_ENST00000309880_5end |
EntrezGene: | TIGD3 |
HGNC: | 18334 |
UniProt: | Q6B0B8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 9.05e-20 | 8 |
neutrophil | 1.31e-19 | 3 |
blood cell | 2.53e-14 | 11 |
eosinophil | 6.67e-14 | 2 |
plasmacytoid dendritic cell | 4.68e-09 | 3 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.20e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 2.15e-14 | 15 |
haemolymphatic fluid | 2.15e-14 | 15 |
organism substance | 2.15e-14 | 15 |
cerebellum | 1.11e-09 | 6 |
rhombic lip | 1.11e-09 | 6 |
segmental subdivision of hindbrain | 3.27e-08 | 12 |
hindbrain | 3.27e-08 | 12 |
presumptive hindbrain | 3.27e-08 | 12 |
segmental subdivision of nervous system | 1.38e-07 | 13 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.