FFCP PHASE1:Hg19::chr11:96056639..96056652,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3213|description=CAGE_peak_at_chr11:96056639..96056652,-|id=chr11:96056639..96056652,-|ontology_enrichment_celltype=CL:0002087!4.11e-19!119;CL:0002031!9.96e-18!124;CL:0000738!3.58e-17!140;CL:0002057!2.30e-15!42;CL:0000860!2.51e-13!45;CL:0002009!4.61e-13!65;CL:0000557!7.97e-13!71;CL:0000766!1.17e-12!76;CL:0002194!1.38e-12!63;CL:0000576!1.38e-12!63;CL:0000040!1.38e-12!63;CL:0000559!1.38e-12!63;CL:0000839!7.92e-12!70;CL:0002032!4.62e-10!165;CL:0000837!4.62e-10!165;CL:0000037!9.01e-10!172;CL:0000566!9.01e-10!172;CL:0000988!1.80e-08!182|ontology_enrichment_celltype_v019=CL:0000860;9.69e-21;33!CL:0002057;9.69e-21;33!CL:0000473;1.10e-18;39!CL:0000234;1.10e-18;39!CL:0000576;1.54e-12;48!CL:0000766;2.66e-09;69!CL:0002087;7.26e-08;104|ontology_enrichment_celltype_v019_2=CL:0000473,3.76e-24,48;CL:0000234,3.76e-24,48;CL:0000860,1.24e-21,42;CL:0002057,1.24e-21,42;CL:0002087,1.65e-21,115;CL:0002009,6.07e-20,61;CL:0002194,1.20e-19,59;CL:0000576,1.20e-19,59;CL:0000040,1.20e-19,59;CL:0000559,1.20e-19,59;CL:0000738,3.32e-19,136;CL:0002031,8.00e-19,120;CL:0000766,1.59e-17,72;CL:0000557,3.61e-17,67;CL:0000839,1.99e-16,66;CL:0000037,2.29e-12,168;CL:0002032,3.84e-12,161;CL:0000837,3.84e-12,161;CL:0000988,6.05e-11,177;CL:0000763,8.78e-09,108;CL:0000049,8.78e-09,108|ontology_enrichment_development_v019=CL:0002057;5.56e-16;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.15e-11!102;UBERON:0003061!2.15e-11!102;UBERON:0002193!1.05e-10!112;UBERON:0002371!1.55e-10!80;UBERON:0001474!8.92e-09!86;UBERON:0004765!3.19e-08!101;UBERON:0001434!3.19e-08!101;UBERON:0002405!1.70e-07!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.92e-15,76;UBERON:0002390,1.64e-13,98;UBERON:0003061,1.64e-13,98;UBERON:0001474,4.52e-13,82;UBERON:0002193,8.73e-13,108;UBERON:0002405,5.90e-12,93;UBERON:0004765,5.53e-11,90;UBERON:0001434,6.80e-09,100|phase1_expression=0,0.428201047781966,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0.873765488520689,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0,1.14494394852423,1.64249310087461,1.63205431473244,0.382067028739756,0.246301768349837,0.393553906568396,0,0.383829398097213,0.464448369948228,0,0,0,0.232401601740905,1.84820002233648,0,2.21598163412751,2.60707781711184,2.82114131930607,1.11957737119962,1.94336199611388,0.77272670290256,1.89017710413434,1.51150377475524,0.485168122375632,7.43772918098191,4.93401465626191,5.57471467611186,1.7261543539329,2.81776777182011,2.60130452877444,6.55016793399575,1.93645405075148,1.35426486594342,3.20011977222428,2.18324920046277,2.69668181334102,5.81559395504715,1.28371610830437,5.75403413219137,0.329851300186716,0.398927315243264,0.852449501065388,13.930043454172,5.6738522469114,12.4564449799115,2.26123798731069,1.5644487552606,0.65156653411535,7.26479403160043,6.2607198117886,8.86094684834476,0.211255286311942,0.637812899895131,0.419317291016752,0.336985893439485,0.300353785683013,0.64290234678832,0,0.19891667719909,0,3.51992488922645,0,1.77901850772711,0.426730222566507,0.800791974072025,0.574752439954483,1.32208974556972,0,1.1384259382189,1.17447437874188,0.764546456250458,0,1.12101712596307,0,3.73748563216283,9.82526906872912,1.43921049299656,0.167186495390678,0,2.36723902867367,0,0.222820913770347,0,0.443067789167242,0.541607727530031,0.25618263945135,0.390178042679635,5.91976456573234,2.76350017785848,0.869409257205157,2.07601188426885,4.0131124213457,3.1360657141493,0.453237370790265,0.383220493601921,2.40539211837841,0.759059076058509,0.637130828648193,0.651083453856419,1.90090408889675,0,0.127986611154418,0,0.473554504088034,1.64225599384209,1.20964045934839,2.67440195783507,5.06885413589796,0,0,0,0.722878304769133,0.50133791063589,0,0,0,1.60709189178915,4.43458794925128,1.14185221401064,0.523916301990851,0,0,0.324547393654683,0.348259474598534,0.797747763113191,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0,0.516833518338658,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0,0,0.535798369704479,0.22452937262617,0.337834441449967,0,0,0,1.31780417436063,0,0,0,0.25326102332916,0.794455084879313,0.286836620748814,0,0,0,0,0,0.269421344139376,0.980771418680752,0,1.15235184896,0,0,0,0,0.469737994575059,0.485618833104395,0.98315564691574,0.408308342509787,1.22834317311768,0.309977343527296,0,0,0,0,0.841680569770331,0.500474079487857,0.277064115484183,0,0.612975591598039,0.300476117813194,0.113432183160021,0.538168907066586,0.213557388818567,0.423863802319124,0.900273288253207,0,0,0.18611685633159,0.675105328965065,0,1.26216887122057,0.552299391853796,0,1.42003837006646,0,0,0,0.272746120590835,0,0.243947412259191,0.132529768321485,0.116193942869518,0.310983165046111,0.252320850875628,0.72995471815166,0,0.6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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3213 | |||
|description=CAGE_peak_at_chr11:96056639..96056652,- | |||
|id=chr11:96056639..96056652,- | |||
|ontology_enrichment_celltype=CL:0002087!4.11e-19!119;CL:0002031!9.96e-18!124;CL:0000738!3.58e-17!140;CL:0002057!2.30e-15!42;CL:0000860!2.51e-13!45;CL:0002009!4.61e-13!65;CL:0000557!7.97e-13!71;CL:0000766!1.17e-12!76;CL:0002194!1.38e-12!63;CL:0000576!1.38e-12!63;CL:0000040!1.38e-12!63;CL:0000559!1.38e-12!63;CL:0000839!7.92e-12!70;CL:0002032!4.62e-10!165;CL:0000837!4.62e-10!165;CL:0000037!9.01e-10!172;CL:0000566!9.01e-10!172;CL:0000988!1.80e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.69e-21;33!CL:0002057;9.69e-21;33!CL:0000473;1.10e-18;39!CL:0000234;1.10e-18;39!CL:0000576;1.54e-12;48!CL:0000766;2.66e-09;69!CL:0002087;7.26e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.76e-24,48;CL:0000234,3.76e-24,48;CL:0000860,1.24e-21,42;CL:0002057,1.24e-21,42;CL:0002087,1.65e-21,115;CL:0002009,6.07e-20,61;CL:0002194,1.20e-19,59;CL:0000576,1.20e-19,59;CL:0000040,1.20e-19,59;CL:0000559,1.20e-19,59;CL:0000738,3.32e-19,136;CL:0002031,8.00e-19,120;CL:0000766,1.59e-17,72;CL:0000557,3.61e-17,67;CL:0000839,1.99e-16,66;CL:0000037,2.29e-12,168;CL:0002032,3.84e-12,161;CL:0000837,3.84e-12,161;CL:0000988,6.05e-11,177;CL:0000763,8.78e-09,108;CL:0000049,8.78e-09,108 | |||
|ontology_enrichment_development_v019=CL:0002057;5.56e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.15e-11!102;UBERON:0003061!2.15e-11!102;UBERON:0002193!1.05e-10!112;UBERON:0002371!1.55e-10!80;UBERON:0001474!8.92e-09!86;UBERON:0004765!3.19e-08!101;UBERON:0001434!3.19e-08!101;UBERON:0002405!1.70e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.92e-15,76;UBERON:0002390,1.64e-13,98;UBERON:0003061,1.64e-13,98;UBERON:0001474,4.52e-13,82;UBERON:0002193,8.73e-13,108;UBERON:0002405,5.90e-12,93;UBERON:0004765,5.53e-11,90;UBERON:0001434,6.80e-09,100 | |||
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| |||
|short_description=p@chr11:96056639..96056652,- | |||
}} |
Revision as of 20:18, 10 September 2013
Short description: | p@chr11:96056639..96056652, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:96056639..96056652, - |
Coexpression cluster: | C3213_CD14_Mast_CD4_lung_Neutrophils_transitionalcell_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.76e-24 | 48 |
phagocyte | 3.76e-24 | 48 |
classical monocyte | 1.24e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.24e-21 | 42 |
nongranular leukocyte | 1.65e-21 | 115 |
macrophage dendritic cell progenitor | 6.07e-20 | 61 |
monopoietic cell | 1.20e-19 | 59 |
monocyte | 1.20e-19 | 59 |
monoblast | 1.20e-19 | 59 |
promonocyte | 1.20e-19 | 59 |
leukocyte | 3.32e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 8.00e-19 | 120 |
myeloid leukocyte | 1.59e-17 | 72 |
granulocyte monocyte progenitor cell | 3.61e-17 | 67 |
myeloid lineage restricted progenitor cell | 1.99e-16 | 66 |
hematopoietic stem cell | 2.29e-12 | 168 |
hematopoietic oligopotent progenitor cell | 3.84e-12 | 161 |
hematopoietic multipotent progenitor cell | 3.84e-12 | 161 |
hematopoietic cell | 6.05e-11 | 177 |
myeloid cell | 8.78e-09 | 108 |
common myeloid progenitor | 8.78e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.92e-15 | 76 |
hematopoietic system | 1.64e-13 | 98 |
blood island | 1.64e-13 | 98 |
bone element | 4.52e-13 | 82 |
hemolymphoid system | 8.73e-13 | 108 |
immune system | 5.90e-12 | 93 |
skeletal element | 5.53e-11 | 90 |
skeletal system | 6.80e-09 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.