FFCP PHASE1:Hg19::chr12:106642323..106642356,-: Difference between revisions
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{{FFCP | 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6|short_description=p8@CKAP4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10970 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16991 | |||
|TSSclassifier=W | |||
|UniProt=Q8TB01 | |||
|association_with_transcript=-414bp_to_BC025341_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_8_at_CKAP4_5end | |||
|id=chr12:106642323..106642356,- | |||
|ontology_enrichment_celltype=CL:0000222!5.23e-20!119;CL:0002057!2.96e-17!42;CL:0000144!3.26e-17!625;CL:0002371!1.05e-15!591;CL:0000860!1.83e-14!45;CL:0000548!1.09e-13!679;CL:0000004!1.09e-13!679;CL:0000255!1.09e-13!679;CL:0000055!2.11e-13!180;CL:0000012!2.78e-13!682;CL:0000048!6.19e-13!430;CL:0000723!4.69e-12!436;CL:0000680!1.73e-11!57;CL:0000056!1.73e-11!57;CL:0000355!1.73e-11!57;CL:0000183!3.26e-11!59;CL:0000034!7.73e-11!444;CL:0000187!9.43e-11!54;CL:0000220!4.94e-10!246;CL:0002321!1.12e-09!248;CL:0000192!1.14e-09!42;CL:0000514!1.14e-09!42;CL:0000359!5.91e-09!32;CL:0000213!1.01e-08!57;CL:0000215!1.01e-08!57;CL:0000766!1.22e-08!76;CL:0000393!3.10e-08!60;CL:0000211!3.10e-08!60;CL:0002194!3.40e-07!63;CL:0000576!3.40e-07!63;CL:0000040!3.40e-07!63;CL:0000559!3.40e-07!63;CL:0000057!8.43e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.99e-23;33!CL:0002057;9.99e-23;33!CL:0000473;2.12e-15;39!CL:0000234;2.12e-15;39!CL:0000576;4.97e-11;48!CL:0000359;6.89e-09;32!CL:0000766;1.50e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.23e-22,42;CL:0002057,7.23e-22,42;CL:0000473,2.86e-18,48;CL:0000234,2.86e-18,48;CL:0000048,8.80e-16,427;CL:0000766,3.71e-15,72;CL:0000723,7.21e-15,433;CL:0000034,1.05e-13,441;CL:0000222,3.04e-13,121;CL:0002194,3.79e-13,59;CL:0000576,3.79e-13,59;CL:0000040,3.79e-13,59;CL:0000559,3.79e-13,59;CL:0002009,2.80e-12,61;CL:0000839,1.84e-11,66;CL:0000557,4.30e-11,67;CL:0000359,9.07e-10,32;CL:0000134,1.44e-08,354;CL:0002320,5.08e-08,361;CL:0000192,6.69e-08,43;CL:0000514,6.69e-08,43;CL:0000680,8.37e-08,58;CL:0000056,8.37e-08,58;CL:0000355,8.37e-08,58;CL:0000187,2.23e-07,55;CL:0000219,6.01e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.57e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;4.35e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.50e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000926!5.38e-16!448;UBERON:0004120!5.38e-16!448;UBERON:0006603!5.38e-16!448;UBERON:0000055!9.55e-15!69;UBERON:0003081!3.11e-14!216;UBERON:0002204!9.91e-14!167;UBERON:0004872!1.86e-13!84;UBERON:0002049!1.18e-12!79;UBERON:0007798!1.18e-12!79;UBERON:0004535!1.43e-12!110;UBERON:0001981!1.74e-12!60;UBERON:0007500!1.74e-12!60;UBERON:0004537!1.74e-12!60;UBERON:0006965!1.74e-12!60;UBERON:0001009!8.10e-12!113;UBERON:0003914!1.52e-11!118;UBERON:0001637!2.11e-11!42;UBERON:0003509!2.11e-11!42;UBERON:0004572!2.11e-11!42;UBERON:0000486!4.06e-11!82;UBERON:0005256!3.51e-10!143;UBERON:0004573!3.98e-10!33;UBERON:0004571!3.98e-10!33;UBERON:0004290!4.68e-10!70;UBERON:0000914!6.85e-10!83;UBERON:0002329!6.85e-10!83;UBERON:0003077!6.85e-10!83;UBERON:0003059!6.85e-10!83;UBERON:0007282!6.85e-10!83;UBERON:0009618!6.85e-10!83;UBERON:0007285!6.85e-10!83;UBERON:0001134!1.05e-09!61;UBERON:0002036!1.05e-09!61;UBERON:0003082!1.05e-09!61;UBERON:0002385!1.93e-09!63;UBERON:0001015!1.93e-09!63;UBERON:0000383!1.93e-09!63;UBERON:0000490!3.84e-09!138;UBERON:0000480!5.40e-08!626;UBERON:0000467!9.79e-08!625;UBERON:0002100!4.54e-07!216;UBERON:0000468!9.55e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.40e-10;33!UBERON:0004571;1.40e-10;33!UBERON:0001637;1.17e-09;42!UBERON:0003509;1.17e-09;42!UBERON:0004572;1.17e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,5.21e-20,203;UBERON:0000926,8.68e-19,315;UBERON:0004120,8.68e-19,315;UBERON:0006603,8.68e-19,315;UBERON:0000055,2.61e-14,68;UBERON:0002204,4.83e-14,167;UBERON:0001637,8.88e-13,42;UBERON:0003509,8.88e-13,42;UBERON:0004572,8.88e-13,42;UBERON:0004872,3.69e-12,83;UBERON:0007500,5.74e-12,59;UBERON:0001981,5.74e-12,59;UBERON:0004537,5.74e-12,59;UBERON:0006965,5.74e-12,59;UBERON:0004573,8.35e-12,33;UBERON:0004571,8.35e-12,33;UBERON:0004535,1.16e-10,109;UBERON:0002049,2.35e-10,78;UBERON:0007798,2.35e-10,78;UBERON:0001009,6.44e-10,112;UBERON:0002371,6.80e-10,76;UBERON:0001474,1.34e-09,82;UBERON:0003914,2.04e-09,117;UBERON:0002405,4.90e-09,93;UBERON:0001434,5.01e-09,100;UBERON:0004765,1.43e-08,90;UBERON:0002384,2.16e-08,371;UBERON:0002193,1.32e-07,108;UBERON:0000486,1.55e-07,83;UBERON:0007503,2.60e-07,78 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.986680828671798,1.0007329835313,0.893922188854576,2.61701557230111,0,1.26343974685366,0.522371256399677,0.491467873003018,2.09340350391728,1.09220686065086,0.527533956456907,0.123766352960047,0.331397375727916,3.36162573225888,3.01347264011988,3.65155045193687,3.90346239032406,0.246242116153576,0.408001382488506,0.940364164434263,0,0.136874425072884,0.251085279189606,0,0.164201178899891,0,1.57345710739562,0,0.619264493264304,0,0.6024118375565,0.369754010166788,0,0.142169232487422,0,5.53995408531877,4.61252229181326,4.99125002646459,0,0,0,2.90796477559129,1.88937971844405,4.36651310138069,7.90258725479328,4.93401465626191,5.26500830521676,8.63077176966451,8.19714260893122,5.67557351732605,6.89491361473237,3.22742341791913,1.35426486594342,7.34145124216158,2.72906150057846,3.59557575112135,11.6311879100943,7.06043859567406,3.83602275479425,4.28806690242731,4.18873681005427,3.83602275479425,23.7971575675439,18.7237124148076,14.3249117268982,3.51748131359441,4.69334626578181,4.56096573880745,15.1349875658342,10.3117738076518,7.59509729858123,0.211255286311942,0.425208599930087,0.419317291016752,0.786300418025466,1.50176892841506,1.44653028027372,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0,2.43806866313962,1.34140171940727,0.511450247374121,1.0843174571537,3.50936537445123,0.869079113764942,0,1.45990461090791,0.189069634328136,0.221729397462564,0.527008714158756,0.196468613246569,0.728590576585084,0.370784442784429,0,0,0,0,0.571994910780128,0.371457501329565,0.198762407366705,0.860234595106124,2.08284300964557,0.56530794192401,2.51699661725944,0.825354125820202,0.835979866147242,0.258416759169329,0.71153252537342,2.34304428935269,1.61131726843659,3.04108842287405,2.4406205754817,1.83831540172934,2.43042584364528,0.535798369704479,1.34717623575702,0.788280363383256,1.53316637465883,0.949265659568129,1.46561395144326,14.495845917967,19.3890132074163,0.436094052142534,2.48485975847659,2.15271869829786,2.91300197789081,5.44989579422746,2.83734705758686,0.560677600142307,4.2699598291882,5.42668606517752,0.311211035399766,2.69421344139376,0.653847612453835,0.605429710579726,0.576175924479999,0.937285727335186,0.624320153660641,0,0.747243402759005,0.822041490506354,0.647491777472526,0.702254033511242,0.204154171254893,0.245668634623536,0.309977343527296,1.18800285728205,3.21447008062124,1.82032272387605,2.15585442544872,0.336672227908132,0.250237039743928,0.277064115484183,1.31693286264251,1.22595118319608,3.15499923703853,1.24775401476023,2.87023417102179,0.640672166455702,0.635795703478686,1.80054657650641,1.23663035086127,1.28820270022815,0.744467425326359,1.68776332241266,0.974370051611986,0.757301322732344,1.19664868234989,0.646584227275248,3.55009592516614,1.10827308050404,0.67824236924195,1.15956511897978,2.18196896472668,1.43402297694502,0,0.132529768321485,0,0.207322110030741,0,0,1.56449532329816,2.57296375277154,1.38134921352481,1.85747171212792,0.721879481669586,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0,0.134831308160164,0,0,0.738155454624648,4.20725321410337,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0.329250856225877,0,0.201057944823262,0.0925884451585296,0.651616610620649,0,0,0.115930404975077,2.11335649624479,3.3204282985047,1.85194205030644,2.47330397904978,0,0,0.246217006087397,1.40402559083543,0.148631162288728,0,1.84780341018745,1.41775097242386,0.0895585227028483,0,0,0,0,1.03664057770386,0.864719720501769,1.00993946741104,0,0,0,0,0,0.300343057843917,0.285826432630578,0.784917590417525,0.87192013766656,0.2933531432838,3.49033632546,3.57656445851882,0.845302752556,1.32969058292435,1.04007436911366,0.257207374262142,0,0.532844358032199,0.714889968290738,0,0.823240336780769,0.325736184293735,0.355391948742546,0,1.50719688529793,3.48613383440118,2.29937879718731,0,0,0,3.35474797688216,1.14861935834114,4.27910715122155,2.31650090668127,2.05476322550383,0.895304816199478,0,0,0,0,0.254094624222463,0,0,0,0,11.2351053592077,5.9832291840805,11.603634376209,0.49076596687656,0.500170521059677,0.271265023699736,1.87173775377726,1.07057393278297,0.946214490203608,2.22568688486155,2.10662269809403,2.27407504055985,1.03473071292505,1.99267679560631,0.737476674166813,0.955719759148911,0.783204629850962,1.02943027143257,0.413536052245775,3.01999881146064,2.24127871387233,0.303127571446259,0,0,1.24053903909388,1.99500565274481,0.280660094433074,1.15325234330131,0,2.2519548960105,0,1.69630663182921,0.710246901252508,1.72467027628999,1.55776328755086,1.39452454151951,0.241718899183244,2.20557117333613,0.184161977871793,0.918515585316854,2.1850940160806,2.36023946926963,1.80479845162965,0.385076685522074,0,0,0.73886140225013,1.13733384070897,2.89159298970077,1.29549549661284,1.54227252690289,0.270946437543853,1.00337954770971,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0,0.32801464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| |||
|short_description=p8@CKAP4 | |||
}} |
Revision as of 20:38, 10 September 2013
Short description: | p8@CKAP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_CKAP4_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -414bp_to_BC025341_5end |
EntrezGene: | CKAP4 |
HGNC: | 16991 |
UniProt: | Q8TB01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.23e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.23e-22 | 42 |
defensive cell | 2.86e-18 | 48 |
phagocyte | 2.86e-18 | 48 |
multi fate stem cell | 8.80e-16 | 427 |
myeloid leukocyte | 3.71e-15 | 72 |
somatic stem cell | 7.21e-15 | 433 |
stem cell | 1.05e-13 | 441 |
mesodermal cell | 3.04e-13 | 121 |
monopoietic cell | 3.79e-13 | 59 |
monocyte | 3.79e-13 | 59 |
monoblast | 3.79e-13 | 59 |
promonocyte | 3.79e-13 | 59 |
macrophage dendritic cell progenitor | 2.80e-12 | 61 |
myeloid lineage restricted progenitor cell | 1.84e-11 | 66 |
granulocyte monocyte progenitor cell | 4.30e-11 | 67 |
vascular associated smooth muscle cell | 9.07e-10 | 32 |
mesenchymal cell | 1.44e-08 | 354 |
connective tissue cell | 5.08e-08 | 361 |
smooth muscle cell | 6.69e-08 | 43 |
smooth muscle myoblast | 6.69e-08 | 43 |
muscle precursor cell | 8.37e-08 | 58 |
myoblast | 8.37e-08 | 58 |
multi-potent skeletal muscle stem cell | 8.37e-08 | 58 |
muscle cell | 2.23e-07 | 55 |
motile cell | 6.01e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 5.21e-20 | 203 |
mesoderm | 8.68e-19 | 315 |
mesoderm-derived structure | 8.68e-19 | 315 |
presumptive mesoderm | 8.68e-19 | 315 |
vessel | 2.61e-14 | 68 |
musculoskeletal system | 4.83e-14 | 167 |
artery | 8.88e-13 | 42 |
arterial blood vessel | 8.88e-13 | 42 |
arterial system | 8.88e-13 | 42 |
splanchnic layer of lateral plate mesoderm | 3.69e-12 | 83 |
epithelial tube open at both ends | 5.74e-12 | 59 |
blood vessel | 5.74e-12 | 59 |
blood vasculature | 5.74e-12 | 59 |
vascular cord | 5.74e-12 | 59 |
systemic artery | 8.35e-12 | 33 |
systemic arterial system | 8.35e-12 | 33 |
cardiovascular system | 1.16e-10 | 109 |
vasculature | 2.35e-10 | 78 |
vascular system | 2.35e-10 | 78 |
circulatory system | 6.44e-10 | 112 |
bone marrow | 6.80e-10 | 76 |
bone element | 1.34e-09 | 82 |
epithelial tube | 2.04e-09 | 117 |
immune system | 4.90e-09 | 93 |
skeletal system | 5.01e-09 | 100 |
skeletal element | 1.43e-08 | 90 |
connective tissue | 2.16e-08 | 371 |
hemolymphoid system | 1.32e-07 | 108 |
multilaminar epithelium | 1.55e-07 | 83 |
epithelial vesicle | 2.60e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.50e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.