FFCP PHASE1:Hg19::chr12:106697974..106697990,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10970|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16991|TSSclassifier=W|UniProt=|association_with_transcript=38bp_to_ENST00000552828_5end|coexpression_cluster_id=C2|description=CAGE_peak_31_at_CKAP4_5end|id=chr12:106697974..106697990,-|ontology_enrichment_celltype=CL:0000771!4.14e-11!2|ontology_enrichment_celltype_v019=CL:0000771;1.21e-98;2!CL:0000094;1.04e-25;8!CL:0000081;4.91e-19;11|ontology_enrichment_celltype_v019_2=CL:0000771,9.38e-99,2;CL:0000094,9.81e-26,8;CL:0000081,4.69e-19,11|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.56e-27!57;UBERON:0005068!2.56e-27!57;UBERON:0006241!2.56e-27!57;UBERON:0007135!2.56e-27!57;UBERON:0000955!7.31e-24!69;UBERON:0006238!7.31e-24!69;UBERON:0002616!1.79e-23!59;UBERON:0001017!1.50e-21!82;UBERON:0005743!2.46e-20!86;UBERON:0001950!7.34e-20!20;UBERON:0001893!1.72e-19!34;UBERON:0002020!1.89e-19!34;UBERON:0003528!1.89e-19!34;UBERON:0007023!4.28e-19!115;UBERON:0002780!1.99e-18!41;UBERON:0001890!1.99e-18!41;UBERON:0006240!1.99e-18!41;UBERON:0000073!5.69e-18!94;UBERON:0001016!5.69e-18!94;UBERON:0002619!5.72e-18!22;UBERON:0003080!6.31e-18!42;UBERON:0001869!1.63e-17!32;UBERON:0002791!5.53e-17!33;UBERON:0003075!1.21e-16!86;UBERON:0007284!1.21e-16!86;UBERON:0000033!9.82e-16!123;UBERON:0002346!1.04e-15!90;UBERON:0000956!1.12e-15!25;UBERON:0000203!1.12e-15!25;UBERON:0000988!3.42e-15!3;UBERON:0000153!9.24e-15!129;UBERON:0007811!9.24e-15!129;UBERON:0002298!1.01e-14!8;UBERON:0004121!3.55e-12!169;UBERON:0000924!9.12e-12!173;UBERON:0006601!9.12e-12!173;UBERON:0003056!1.69e-11!61;UBERON:0003076!7.82e-11!15;UBERON:0003057!7.82e-11!15;UBERON:0002148!8.55e-11!2;UBERON:0009662!8.55e-11!2;UBERON:0004733!1.02e-09!12;UBERON:0002028!1.02e-09!12;UBERON:0007277!1.02e-09!12;UBERON:0001871!2.46e-09!7;UBERON:0004732!6.02e-09!13;UBERON:0000200!1.16e-07!6;UBERON:0006331!1.84e-07!3;UBERON:0001896!4.13e-07!3;UBERON:0005290!4.13e-07!3;UBERON:0010096!4.13e-07!3|ontology_enrichment_uberon_v019=UBERON:0002336;2.42e-50;1!UBERON:0011215;2.42e-50;1!UBERON:0001018;2.42e-50;1!UBERON:0002473;2.42e-50;1!UBERON:0005340;2.42e-50;1!UBERON:0003544;2.42e-50;1!UBERON:0005970;2.42e-50;1!UBERON:0002316;2.42e-50;1!UBERON:0001020;2.42e-50;1!UBERON:0002437;2.42e-50;1!UBERON:0005162;5.56e-26;2!UBERON:0000122;5.56e-26;2!UBERON:0001871;2.26e-08;6|ontology_enrichment_uberon_v019_2=UBERON:0002336,2.42e-50,1;UBERON:0011215,2.42e-50,1;UBERON:0001018,2.42e-50,1;UBERON:0002473,2.42e-50,1;UBERON:0005340,2.42e-50,1;UBERON:0003544,2.42e-50,1;UBERON:0005970,2.42e-50,1;UBERON:0002316,2.42e-50,1;UBERON:0001020,2.42e-50,1;UBERON:0002437,2.42e-50,1;UBERON:0005162,5.56e-26,2;UBERON:0000122,5.56e-26,2;UBERON:0001871,2.35e-08,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0,0,0,0,0,0,0.613612095012929,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0.104421949505455,2.15683625538167,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.558867626472451,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0.205116364240755,0,0.276629009856872,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0,0,0.19024743058172,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0.339848664884159,0.328863867814245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0|short_description=p31@CKAP4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10970 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16991 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=38bp_to_ENST00000552828_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_31_at_CKAP4_5end | |||
|id=chr12:106697974..106697990,- | |||
|ontology_enrichment_celltype=CL:0000771!4.14e-11!2 | |||
|ontology_enrichment_celltype_v019=CL:0000771;1.21e-98;2!CL:0000094;1.04e-25;8!CL:0000081;4.91e-19;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,9.38e-99,2;CL:0000094,9.81e-26,8;CL:0000081,4.69e-19,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.56e-27!57;UBERON:0005068!2.56e-27!57;UBERON:0006241!2.56e-27!57;UBERON:0007135!2.56e-27!57;UBERON:0000955!7.31e-24!69;UBERON:0006238!7.31e-24!69;UBERON:0002616!1.79e-23!59;UBERON:0001017!1.50e-21!82;UBERON:0005743!2.46e-20!86;UBERON:0001950!7.34e-20!20;UBERON:0001893!1.72e-19!34;UBERON:0002020!1.89e-19!34;UBERON:0003528!1.89e-19!34;UBERON:0007023!4.28e-19!115;UBERON:0002780!1.99e-18!41;UBERON:0001890!1.99e-18!41;UBERON:0006240!1.99e-18!41;UBERON:0000073!5.69e-18!94;UBERON:0001016!5.69e-18!94;UBERON:0002619!5.72e-18!22;UBERON:0003080!6.31e-18!42;UBERON:0001869!1.63e-17!32;UBERON:0002791!5.53e-17!33;UBERON:0003075!1.21e-16!86;UBERON:0007284!1.21e-16!86;UBERON:0000033!9.82e-16!123;UBERON:0002346!1.04e-15!90;UBERON:0000956!1.12e-15!25;UBERON:0000203!1.12e-15!25;UBERON:0000988!3.42e-15!3;UBERON:0000153!9.24e-15!129;UBERON:0007811!9.24e-15!129;UBERON:0002298!1.01e-14!8;UBERON:0004121!3.55e-12!169;UBERON:0000924!9.12e-12!173;UBERON:0006601!9.12e-12!173;UBERON:0003056!1.69e-11!61;UBERON:0003076!7.82e-11!15;UBERON:0003057!7.82e-11!15;UBERON:0002148!8.55e-11!2;UBERON:0009662!8.55e-11!2;UBERON:0004733!1.02e-09!12;UBERON:0002028!1.02e-09!12;UBERON:0007277!1.02e-09!12;UBERON:0001871!2.46e-09!7;UBERON:0004732!6.02e-09!13;UBERON:0000200!1.16e-07!6;UBERON:0006331!1.84e-07!3;UBERON:0001896!4.13e-07!3;UBERON:0005290!4.13e-07!3;UBERON:0010096!4.13e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002336;2.42e-50;1!UBERON:0011215;2.42e-50;1!UBERON:0001018;2.42e-50;1!UBERON:0002473;2.42e-50;1!UBERON:0005340;2.42e-50;1!UBERON:0003544;2.42e-50;1!UBERON:0005970;2.42e-50;1!UBERON:0002316;2.42e-50;1!UBERON:0001020;2.42e-50;1!UBERON:0002437;2.42e-50;1!UBERON:0005162;5.56e-26;2!UBERON:0000122;5.56e-26;2!UBERON:0001871;2.26e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,2.42e-50,1;UBERON:0011215,2.42e-50,1;UBERON:0001018,2.42e-50,1;UBERON:0002473,2.42e-50,1;UBERON:0005340,2.42e-50,1;UBERON:0003544,2.42e-50,1;UBERON:0005970,2.42e-50,1;UBERON:0002316,2.42e-50,1;UBERON:0001020,2.42e-50,1;UBERON:0002437,2.42e-50,1;UBERON:0005162,5.56e-26,2;UBERON:0000122,5.56e-26,2;UBERON:0001871,2.35e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0,0,0,0,0,0,0.613612095012929,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0.104421949505455,2.15683625538167,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.558867626472451,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0.205116364240755,0,0.276629009856872,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0,0,0.19024743058172,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0.339848664884159,0.328863867814245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p31@CKAP4 | |||
}} |
Revision as of 20:38, 10 September 2013
Short description: | p31@CKAP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_31_at_CKAP4_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 38bp_to_ENST00000552828_5end |
EntrezGene: | CKAP4 |
HGNC: | 16991 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 9.38e-99 | 2 |
granulocyte | 9.81e-26 | 8 |
blood cell | 4.69e-19 | 11 |
Ontology term | p-value | n |
---|---|---|
corpus callosum | 2.42e-50 | 1 |
central nervous system cell part cluster | 2.42e-50 | 1 |
axon tract | 2.42e-50 | 1 |
intercerebral commissure | 2.42e-50 | 1 |
dorsal telencephalic commissure | 2.42e-50 | 1 |
brain white matter | 2.42e-50 | 1 |
brain commissure | 2.42e-50 | 1 |
white matter | 2.42e-50 | 1 |
nervous system commissure | 2.42e-50 | 1 |
cerebral hemisphere white matter | 2.42e-50 | 1 |
multi cell component structure | 5.56e-26 | 2 |
neuron projection bundle | 5.56e-26 | 2 |
temporal lobe | 2.35e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.