FFCP PHASE1:Hg19::chr12:3068668..3068689,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7004|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11717|TSSclassifier=S|UniProt=Q15561,Q6MZR9|association_with_transcript=-58bp_to_NM_201443_5end|description=CAGE_peak_7_at_TEAD4_5end|id=chr12:3068668..3068689,+|ontology_enrichment_celltype=CL:0000066!1.38e-18!254;CL:0000039!5.50e-07!7;CL:0000586!5.50e-07!7|ontology_enrichment_celltype_v019=CL:0000039;6.19e-13;7!CL:0000586;6.19e-13;7!CL:0000082;9.47e-07;19|ontology_enrichment_celltype_v019_2=CL:0000039,4.43e-13,7;CL:0000586,4.43e-13,7;CL:0000066,1.59e-09,253;CL:0000082,5.20e-07,19|ontology_enrichment_development_v019=UBERON:0008947;2.93e-19;29!UBERON:0001041;5.28e-13;30!UBERON:0003104;5.42e-11;31|ontology_enrichment_disease=DOID:0050687!1.05e-26!143;DOID:305!2.55e-24!106;DOID:14566!6.72e-18!239;DOID:162!8.09e-18!235;DOID:7!1.37e-07!39|ontology_enrichment_disease_v019=DOID:1324;6.35e-09;15!DOID:0050615;2.82e-08;16!DOID:3908;5.10e-08;5|ontology_enrichment_disease_v019_2=DOID:305,6.72e-19,106;DOID:0050687,8.01e-18,143;DOID:162,4.25e-12,235;DOID:14566,1.36e-11,239;DOID:1324,2.87e-09,15;DOID:0050615,1.35e-08,16;DOID:3908,3.68e-08,5|ontology_enrichment_uberon=UBERON:0003104!2.37e-08!238;UBERON:0009142!2.37e-08!238;UBERON:0004119!2.46e-08!169;UBERON:0000925!2.46e-08!169;UBERON:0006595!2.46e-08!169;UBERON:0000077!4.68e-08!130;UBERON:0000065!6.77e-08!53;UBERON:0008947!7.17e-08!38;UBERON:0003258!7.17e-08!38;UBERON:0001007!1.66e-07!155;UBERON:0001555!1.66e-07!155;UBERON:0007026!1.66e-07!155;UBERON:0001737!2.35e-07!9;UBERON:0004921!7.44e-07!129;UBERON:0004185!7.44e-07!129|ontology_enrichment_uberon_v019=UBERON:0001737;9.32e-12;9!UBERON:0001557;9.32e-12;9!UBERON:0000065;3.36e-09;44!UBERON:0002048;5.95e-09;22!UBERON:0000117;5.95e-09;22!UBERON:0000171;5.95e-09;22!UBERON:0000170;5.95e-09;22!UBERON:0001134;7.36e-09;16!UBERON:0002036;7.36e-09;16!UBERON:0000072;3.58e-08;37!UBERON:0004802;9.47e-07;19!UBERON:0000115;9.47e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0008947,4.94e-14,38;UBERON:0003258,4.94e-14,38;UBERON:0001737,4.74e-12,9;UBERON:0005177,1.37e-10,101;UBERON:0001041,7.33e-10,87;UBERON:0000065,8.15e-10,54;UBERON:0002048,3.47e-09,22;UBERON:0000117,3.47e-09,22;UBERON:0000171,3.47e-09,22;UBERON:0000170,3.47e-09,22;UBERON:0005597,3.47e-09,22;UBERON:0000118,3.47e-09,22;UBERON:0000072,4.00e-09,47;UBERON:0001048,1.34e-08,160;UBERON:0009569,6.07e-08,112;UBERON:0004921,8.24e-08,118;UBERON:0001007,8.28e-08,145;UBERON:0001555,8.28e-08,145;UBERON:0007026,8.28e-08,145;UBERON:0005911,8.59e-08,82;UBERON:0004802,5.20e-07,19;UBERON:0000115,5.20e-07,19;UBERON:0001004,6.27e-07,74|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0,2.79120467188971,0,0.791300934685361,0.123766352960047,0,0,0,0,0,0.492484232307152,1.63200552995402,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0.189069634328136,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0.760272105718513,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.25326102332916,0,0.573673241497627,0,0.560677600142307,0,0,0,0,0.326923806226917,0.151357427644931,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0,0.226864366320042,0.358779271377724,0,0,0.900273288253207,0.103052529238439,0.257640540045629,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0.355009592516614,0.201504196455281,0.508681776931463,0,0,0,0.609868530647977,1.06023814657188,0.69716365721711,0.518305275076852,1.00928340350251,0.36497735907583,0,0,0,0,0,1.18306800039844,1.85443159085912,1.44606617930089,2.42646740011267,1.74303555273925,1.42362371466658,0.808987848960987,0.196221465125346,1.53898862778556,0.738155454624648,1.40241773803446,0.4115740113314,0,0,0,0,0,0.491953754172454,0.171567810298526,0,0,0.301586917234893,0,0,0,0,0,0.352226082707465,0.288732895522148,0,0,0.790204397959275,0,0,0,0,0,0.335964256397719,0,0.268675568108545,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.2933531432838,0,0,0,0.26593811658487,1.04007436911366,0,0,0.799266537048298,0.285955987316295,0,0.823240336780769,0,0,0,0,0,0.399891964728228,0,0,0,0.479249710983165,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.623912584592421,0.713715955188647,1.10391690523754,0,0,0,0,0,0.184369168541703,0,0,4.46086450954113,0,0,0,0.606255142892519,0,0.907170879989041,0,0,0.280660094433074,0,1.02341449813341,0.482561763430822,0,0,0.177561725313127,0,0,0.116210378459959,0.846016147141356,0.200506470303285,0,0,0.728364672026868,0.131124414959424,0,0.15403067420883,0,0,0,1.13733384070897,0.170093705276516,0.215915916102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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7004 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11717 | |||
|TSSclassifier=S | |||
|UniProt=Q15561,Q6MZR9 | |||
|association_with_transcript=-58bp_to_NM_201443_5end | |||
|description=CAGE_peak_7_at_TEAD4_5end | |||
|id=chr12:3068668..3068689,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.38e-18!254;CL:0000039!5.50e-07!7;CL:0000586!5.50e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;6.19e-13;7!CL:0000586;6.19e-13;7!CL:0000082;9.47e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.43e-13,7;CL:0000586,4.43e-13,7;CL:0000066,1.59e-09,253;CL:0000082,5.20e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.93e-19;29!UBERON:0001041;5.28e-13;30!UBERON:0003104;5.42e-11;31 | |||
|ontology_enrichment_disease=DOID:0050687!1.05e-26!143;DOID:305!2.55e-24!106;DOID:14566!6.72e-18!239;DOID:162!8.09e-18!235;DOID:7!1.37e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1324;6.35e-09;15!DOID:0050615;2.82e-08;16!DOID:3908;5.10e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.72e-19,106;DOID:0050687,8.01e-18,143;DOID:162,4.25e-12,235;DOID:14566,1.36e-11,239;DOID:1324,2.87e-09,15;DOID:0050615,1.35e-08,16;DOID:3908,3.68e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0003104!2.37e-08!238;UBERON:0009142!2.37e-08!238;UBERON:0004119!2.46e-08!169;UBERON:0000925!2.46e-08!169;UBERON:0006595!2.46e-08!169;UBERON:0000077!4.68e-08!130;UBERON:0000065!6.77e-08!53;UBERON:0008947!7.17e-08!38;UBERON:0003258!7.17e-08!38;UBERON:0001007!1.66e-07!155;UBERON:0001555!1.66e-07!155;UBERON:0007026!1.66e-07!155;UBERON:0001737!2.35e-07!9;UBERON:0004921!7.44e-07!129;UBERON:0004185!7.44e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.32e-12;9!UBERON:0001557;9.32e-12;9!UBERON:0000065;3.36e-09;44!UBERON:0002048;5.95e-09;22!UBERON:0000117;5.95e-09;22!UBERON:0000171;5.95e-09;22!UBERON:0000170;5.95e-09;22!UBERON:0001134;7.36e-09;16!UBERON:0002036;7.36e-09;16!UBERON:0000072;3.58e-08;37!UBERON:0004802;9.47e-07;19!UBERON:0000115;9.47e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008947,4.94e-14,38;UBERON:0003258,4.94e-14,38;UBERON:0001737,4.74e-12,9;UBERON:0005177,1.37e-10,101;UBERON:0001041,7.33e-10,87;UBERON:0000065,8.15e-10,54;UBERON:0002048,3.47e-09,22;UBERON:0000117,3.47e-09,22;UBERON:0000171,3.47e-09,22;UBERON:0000170,3.47e-09,22;UBERON:0005597,3.47e-09,22;UBERON:0000118,3.47e-09,22;UBERON:0000072,4.00e-09,47;UBERON:0001048,1.34e-08,160;UBERON:0009569,6.07e-08,112;UBERON:0004921,8.24e-08,118;UBERON:0001007,8.28e-08,145;UBERON:0001555,8.28e-08,145;UBERON:0007026,8.28e-08,145;UBERON:0005911,8.59e-08,82;UBERON:0004802,5.20e-07,19;UBERON:0000115,5.20e-07,19;UBERON:0001004,6.27e-07,74 | |||
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| |||
|short_description=p7@TEAD4 | |||
}} |
Revision as of 22:24, 10 September 2013
Short description: | p7@TEAD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_TEAD4_5end |
Coexpression cluster: | NA |
Association with transcript: | -58bp_to_NM_201443_5end |
EntrezGene: | TEAD4 |
HGNC: | 11717 |
UniProt: | Q15561Q6MZR9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.43e-13 | 7 |
germ cell | 4.43e-13 | 7 |
epithelial cell | 1.59e-09 | 253 |
epithelial cell of lung | 5.20e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory primordium | 4.94e-14 | 38 |
endoderm of foregut | 4.94e-14 | 38 |
larynx | 4.74e-12 | 9 |
trunk region element | 1.37e-10 | 101 |
foregut | 7.33e-10 | 87 |
respiratory tract | 8.15e-10 | 54 |
lung | 3.47e-09 | 22 |
respiratory tube | 3.47e-09 | 22 |
respiration organ | 3.47e-09 | 22 |
pair of lungs | 3.47e-09 | 22 |
lung primordium | 3.47e-09 | 22 |
lung bud | 3.47e-09 | 22 |
segment of respiratory tract | 4.00e-09 | 47 |
primordium | 1.34e-08 | 160 |
subdivision of trunk | 6.07e-08 | 112 |
subdivision of digestive tract | 8.24e-08 | 118 |
digestive system | 8.28e-08 | 145 |
digestive tract | 8.28e-08 | 145 |
primitive gut | 8.28e-08 | 145 |
endo-epithelium | 8.59e-08 | 82 |
respiratory tract epithelium | 5.20e-07 | 19 |
lung epithelium | 5.20e-07 | 19 |
respiratory system | 6.27e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.72e-19 | 106 |
cell type cancer | 8.01e-18 | 143 |
cancer | 4.25e-12 | 235 |
disease of cellular proliferation | 1.36e-11 | 239 |
lung cancer | 2.87e-09 | 15 |
respiratory system cancer | 1.35e-08 | 16 |
non-small cell lung carcinoma | 3.68e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.