FFCP PHASE1:Hg19::chr12:80084768..80084821,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5074 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8614 | |||
|TSSclassifier=S | |||
|UniProt=Q96IZ0 | |||
|association_with_transcript=0bp_to_NM_002583,uc001syx.2_5end | |||
|coexpression_cluster_id=C1688 | |||
|description=CAGE_peak_2_at_PAWR_5end | |||
|id=chr12:80084768..80084821,- | |||
|ontology_enrichment_celltype=CL:0000066!5.06e-50!254;CL:0002321!2.31e-15!248;CL:0000220!1.37e-14!246;CL:0000076!2.35e-11!62;CL:0000223!4.07e-11!59;CL:0002076!5.22e-09!43;CL:0000082!2.95e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.40e-07;42!CL:0000082;2.11e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.79e-51,253;CL:0002321,6.16e-15,250;CL:0000223,5.75e-12,58;CL:0000076,8.97e-11,63;CL:0002076,6.95e-10,42;CL:0000082,2.69e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0001041;9.42e-10;30!UBERON:0008947;1.52e-08;29 | |||
|ontology_enrichment_disease=DOID:305!1.34e-35!106;DOID:0050687!4.47e-35!143;DOID:162!9.07e-20!235;DOID:14566!1.48e-19!239;DOID:299!6.02e-09!25;DOID:7!7.21e-09!39;DOID:0050615!2.26e-07!16;DOID:1324!8.99e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:305;3.92e-11;106!DOID:299;5.03e-09;25!DOID:0050687;1.19e-07;143!DOID:0050615;1.58e-07;16!DOID:7;4.68e-07;39!DOID:1324;6.32e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.74e-36,106;DOID:0050687,6.55e-35,143;DOID:162,6.21e-20,235;DOID:14566,1.02e-19,239;DOID:299,5.34e-09,25;DOID:7,6.41e-09,39;DOID:0050615,2.06e-07,16;DOID:1324,8.26e-07,15 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004807;1.23e-07;22!UBERON:0004802;2.11e-07;19!UBERON:0000115;2.11e-07;19!UBERON:0002048;2.47e-07;22!UBERON:0000117;2.47e-07;22!UBERON:0000171;2.47e-07;22!UBERON:0000170;2.47e-07;22!UBERON:0000065;6.29e-07;44 | |||
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| |||
|short_description=p2@PAWR | |||
}} |
Revision as of 00:37, 11 September 2013
Short description: | p2@PAWR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PAWR_5end |
Coexpression cluster: | C1688_pancreatic_large_testicular_oral_extraskeletal_mesothelioma_small |
Association with transcript: | 0bp_to_NM_002583, uc001syx.2_5end |
EntrezGene: | PAWR |
HGNC: | 8614 |
UniProt: | Q96IZ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.79e-51 | 253 |
embryonic cell | 6.16e-15 | 250 |
endodermal cell | 5.75e-12 | 58 |
squamous epithelial cell | 8.97e-11 | 63 |
endo-epithelial cell | 6.95e-10 | 42 |
epithelial cell of lung | 2.69e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.84e-17 | 160 |
endoderm | 2.84e-17 | 160 |
presumptive endoderm | 2.84e-17 | 160 |
digestive system | 3.31e-16 | 145 |
digestive tract | 3.31e-16 | 145 |
primitive gut | 3.31e-16 | 145 |
subdivision of trunk | 6.54e-14 | 112 |
subdivision of digestive tract | 5.48e-13 | 118 |
trunk region element | 6.40e-13 | 101 |
endo-epithelium | 1.24e-11 | 82 |
primordium | 2.65e-11 | 160 |
foregut | 1.79e-09 | 87 |
trunk | 4.88e-09 | 199 |
epithelial bud | 9.90e-09 | 37 |
respiratory primordium | 1.77e-08 | 38 |
endoderm of foregut | 1.77e-08 | 38 |
abdominal segment of trunk | 2.07e-08 | 60 |
abdomen | 2.07e-08 | 60 |
respiratory system | 2.84e-08 | 74 |
abdomen element | 1.44e-07 | 54 |
abdominal segment element | 1.44e-07 | 54 |
respiratory tract epithelium | 2.69e-07 | 19 |
lung epithelium | 2.69e-07 | 19 |
lung | 2.84e-07 | 22 |
respiratory tube | 2.84e-07 | 22 |
respiration organ | 2.84e-07 | 22 |
pair of lungs | 2.84e-07 | 22 |
lung primordium | 2.84e-07 | 22 |
lung bud | 2.84e-07 | 22 |
anatomical cavity | 3.92e-07 | 61 |
epithelial fold | 4.64e-07 | 47 |
respiratory tract | 5.22e-07 | 54 |
reproductive structure | 5.68e-07 | 59 |
reproductive system | 5.68e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.74e-36 | 106 |
cell type cancer | 6.55e-35 | 143 |
cancer | 6.21e-20 | 235 |
disease of cellular proliferation | 1.02e-19 | 239 |
adenocarcinoma | 5.34e-09 | 25 |
disease of anatomical entity | 6.41e-09 | 39 |
respiratory system cancer | 2.06e-07 | 16 |
lung cancer | 8.26e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.