FFCP PHASE1:Hg19::chr13:111989759..111989819,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C69|description=CAGE_peak_at_chr13:111989759..111989819,+|id=chr13:111989759..111989819,+|ontology_enrichment_celltype=CL:0000057!5.48e-23!75;CL:0000055!2.42e-22!180;CL:0000048!1.75e-15!430;CL:0000723!9.37e-15!436;CL:0000034!8.01e-14!444;CL:0002320!6.55e-13!365;CL:0002371!4.05e-12!591;CL:0000144!1.46e-11!625;CL:0002620!1.25e-10!23;CL:0000134!4.97e-10!358;CL:0000219!4.21e-09!390;CL:0000548!6.56e-09!679;CL:0000004!6.56e-09!679;CL:0000255!6.56e-09!679;CL:0000012!1.14e-08!682;CL:0002551!9.42e-08!6;CL:0000183!2.93e-07!59;CL:0000187!3.59e-07!54;CL:0002570!9.41e-07!8|ontology_enrichment_celltype_v019=CL:0002620;2.03e-11;23!CL:0002551;1.61e-09;6!CL:0000057;2.86e-08;73!CL:0002582;5.67e-08;3!CL:0002564;9.24e-08;3|ontology_enrichment_celltype_v019_2=CL:0000057,1.47e-17,76;CL:0002620,2.59e-11,23;CL:0002551,1.39e-09,6;CL:0002320,7.46e-09,361;CL:0000048,2.03e-08,427;CL:0000723,4.39e-08,433;CL:0002582,5.32e-08,3;CL:0002564,6.27e-08,3;CL:0000034,1.18e-07,441|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.71e-13!375;UBERON:0000914!2.86e-12!83;UBERON:0002329!2.86e-12!83;UBERON:0003077!2.86e-12!83;UBERON:0003059!2.86e-12!83;UBERON:0007282!2.86e-12!83;UBERON:0009618!2.86e-12!83;UBERON:0007285!2.86e-12!83;UBERON:0003102!1.45e-11!95;UBERON:0004290!8.14e-09!70;UBERON:0002199!1.24e-08!45;UBERON:0002416!1.24e-08!45;UBERON:0000486!2.44e-07!82;UBERON:0005256!7.80e-07!143|ontology_enrichment_uberon_v019=UBERON:0011135;2.17e-12;5!UBERON:0002216;2.17e-12;5!UBERON:0011134;2.17e-12;5!UBERON:0002209;2.17e-12;5!UBERON:0002213;2.17e-12;5!UBERON:0007844;2.17e-12;5!UBERON:0011138;2.17e-12;5!UBERON:0001130;2.17e-12;5!UBERON:0001066;2.17e-12;5!UBERON:0001468;2.17e-12;5!UBERON:0000075;6.34e-11;16!UBERON:0003102;9.19e-09;50!UBERON:0002067;1.45e-08;9!UBERON:0002199;6.80e-08;46!UBERON:0002416;6.80e-08;46!UBERON:0002242;9.24e-08;3!UBERON:0004905;1.48e-07;8!UBERON:0000982;1.48e-07;8!UBERON:0004770;1.48e-07;8!UBERON:0002072;1.69e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0003102,7.13e-15,99;UBERON:0002199,1.22e-12,46;UBERON:0002416,1.22e-12,46;UBERON:0011135,1.50e-12,5;UBERON:0002216,1.50e-12,5;UBERON:0011134,1.50e-12,5;UBERON:0002209,1.50e-12,5;UBERON:0002213,1.50e-12,5;UBERON:0005856,1.50e-12,5;UBERON:0005866,1.50e-12,5;UBERON:0005863,1.50e-12,5;UBERON:0007844,1.50e-12,5;UBERON:0011138,1.50e-12,5;UBERON:0001130,1.50e-12,5;UBERON:0001066,1.50e-12,5;UBERON:0001468,1.50e-12,5;UBERON:0000075,4.91e-11,16;UBERON:0002384,2.22e-09,371;UBERON:0002097,1.22e-08,41;UBERON:0002067,1.32e-08,9;UBERON:0004016,1.32e-08,9;UBERON:0010083,1.32e-08,9;UBERON:0002242,6.27e-08,3;UBERON:0003068,6.27e-08,3;UBERON:0002328,6.27e-08,3;UBERON:0004880,6.27e-08,3;UBERON:0011137,1.11e-07,14;UBERON:0004905,1.19e-07,8;UBERON:0000982,1.19e-07,8;UBERON:0004770,1.19e-07,8;UBERON:0002072,1.61e-07,5|phase1_expression=0,0.214100523890983,0,0,0,0,0,1.89515962028049,3.3954131665979,0,0,0,0,8.78741106016331,5.30235801164665,0,0,0,0,0.492484232307152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.863077176966451,0.256160706529101,2.12834006899727,0,0,0,0,0,0,0,0,0,0.329851300186716,0,1.27867425159808,0,0,0,1.00499466102697,1.0429658368404,1.95469960234605,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72046919021225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0.354668382198357,1.68203280042692,0,0,0.933633106199299,0.134710672069688,0,0.151357427644931,1.72852777344,6.32667865951251,3.74592092196385,1.1409436430889,0.896692083310806,1.87895197830024,3.72307772046703,3.51127016755621,3.26646674007829,3.93069815397658,4.44300859055791,0,0.494533858557114,0,0,9.09015015351958,6.38104451347017,1.6623846929051,0,0,0,0.113432183160021,0,1.06778694409284,1.27159140695737,0.300091096084402,5.66788910811414,0,0,0,0.0974370051611986,0,3.40584624976508,1.61646056818812,0,0.10075209822764,0.169560592310488,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,0,0,1.38134921352481,1.85747171212792,5.77503585335668,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,3.58389135841357,4.15973914111831,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.22001485746285,1.16344544182,0,1.690605505112,0,0,0,0,0.266422179016099,0.428933980974443,2.71310802695722,0.823240336780769,0.65147236858747,0.355391948742546,15.0470855857352,2.41151501647669,1.74306691720059,1.89948683245908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C69 | |||
|description=CAGE_peak_at_chr13:111989759..111989819,+ | |||
|id=chr13:111989759..111989819,+ | |||
|ontology_enrichment_celltype=CL:0000057!5.48e-23!75;CL:0000055!2.42e-22!180;CL:0000048!1.75e-15!430;CL:0000723!9.37e-15!436;CL:0000034!8.01e-14!444;CL:0002320!6.55e-13!365;CL:0002371!4.05e-12!591;CL:0000144!1.46e-11!625;CL:0002620!1.25e-10!23;CL:0000134!4.97e-10!358;CL:0000219!4.21e-09!390;CL:0000548!6.56e-09!679;CL:0000004!6.56e-09!679;CL:0000255!6.56e-09!679;CL:0000012!1.14e-08!682;CL:0002551!9.42e-08!6;CL:0000183!2.93e-07!59;CL:0000187!3.59e-07!54;CL:0002570!9.41e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.03e-11;23!CL:0002551;1.61e-09;6!CL:0000057;2.86e-08;73!CL:0002582;5.67e-08;3!CL:0002564;9.24e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.47e-17,76;CL:0002620,2.59e-11,23;CL:0002551,1.39e-09,6;CL:0002320,7.46e-09,361;CL:0000048,2.03e-08,427;CL:0000723,4.39e-08,433;CL:0002582,5.32e-08,3;CL:0002564,6.27e-08,3;CL:0000034,1.18e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.71e-13!375;UBERON:0000914!2.86e-12!83;UBERON:0002329!2.86e-12!83;UBERON:0003077!2.86e-12!83;UBERON:0003059!2.86e-12!83;UBERON:0007282!2.86e-12!83;UBERON:0009618!2.86e-12!83;UBERON:0007285!2.86e-12!83;UBERON:0003102!1.45e-11!95;UBERON:0004290!8.14e-09!70;UBERON:0002199!1.24e-08!45;UBERON:0002416!1.24e-08!45;UBERON:0000486!2.44e-07!82;UBERON:0005256!7.80e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;2.17e-12;5!UBERON:0002216;2.17e-12;5!UBERON:0011134;2.17e-12;5!UBERON:0002209;2.17e-12;5!UBERON:0002213;2.17e-12;5!UBERON:0007844;2.17e-12;5!UBERON:0011138;2.17e-12;5!UBERON:0001130;2.17e-12;5!UBERON:0001066;2.17e-12;5!UBERON:0001468;2.17e-12;5!UBERON:0000075;6.34e-11;16!UBERON:0003102;9.19e-09;50!UBERON:0002067;1.45e-08;9!UBERON:0002199;6.80e-08;46!UBERON:0002416;6.80e-08;46!UBERON:0002242;9.24e-08;3!UBERON:0004905;1.48e-07;8!UBERON:0000982;1.48e-07;8!UBERON:0004770;1.48e-07;8!UBERON:0002072;1.69e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,7.13e-15,99;UBERON:0002199,1.22e-12,46;UBERON:0002416,1.22e-12,46;UBERON:0011135,1.50e-12,5;UBERON:0002216,1.50e-12,5;UBERON:0011134,1.50e-12,5;UBERON:0002209,1.50e-12,5;UBERON:0002213,1.50e-12,5;UBERON:0005856,1.50e-12,5;UBERON:0005866,1.50e-12,5;UBERON:0005863,1.50e-12,5;UBERON:0007844,1.50e-12,5;UBERON:0011138,1.50e-12,5;UBERON:0001130,1.50e-12,5;UBERON:0001066,1.50e-12,5;UBERON:0001468,1.50e-12,5;UBERON:0000075,4.91e-11,16;UBERON:0002384,2.22e-09,371;UBERON:0002097,1.22e-08,41;UBERON:0002067,1.32e-08,9;UBERON:0004016,1.32e-08,9;UBERON:0010083,1.32e-08,9;UBERON:0002242,6.27e-08,3;UBERON:0003068,6.27e-08,3;UBERON:0002328,6.27e-08,3;UBERON:0004880,6.27e-08,3;UBERON:0011137,1.11e-07,14;UBERON:0004905,1.19e-07,8;UBERON:0000982,1.19e-07,8;UBERON:0004770,1.19e-07,8;UBERON:0002072,1.61e-07,5 | |||
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|short_description=p@chr13:111989759..111989819,+ | |||
}} |
Revision as of 01:32, 11 September 2013
Short description: | p@chr13:111989759..111989819, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:111989759..111989819, + |
Coexpression cluster: | C69_anaplastic_CD14_cord_hairy_mycosis_adult_NK |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.47e-17 | 76 |
skin fibroblast | 2.59e-11 | 23 |
fibroblast of dermis | 1.39e-09 | 6 |
connective tissue cell | 7.46e-09 | 361 |
multi fate stem cell | 2.03e-08 | 427 |
somatic stem cell | 4.39e-08 | 433 |
visceral preadipocyte | 5.32e-08 | 3 |
nucleus pulposus cell of intervertebral disc | 6.27e-08 | 3 |
stem cell | 1.18e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
surface structure | 7.13e-15 | 99 |
integument | 1.22e-12 | 46 |
integumental system | 1.22e-12 | 46 |
intervertebral cartilage | 1.50e-12 | 5 |
symphysis | 1.50e-12 | 5 |
nonsynovial joint | 1.50e-12 | 5 |
fibrous joint | 1.50e-12 | 5 |
cartilaginous joint | 1.50e-12 | 5 |
developing mesenchymal condensation | 1.50e-12 | 5 |
pre-cartilage condensation | 1.50e-12 | 5 |
cartilaginous condensation | 1.50e-12 | 5 |
cartilage element | 1.50e-12 | 5 |
post-cranial axial skeletal system | 1.50e-12 | 5 |
vertebral column | 1.50e-12 | 5 |
intervertebral disk | 1.50e-12 | 5 |
intervertebral joint | 1.50e-12 | 5 |
subdivision of skeletal system | 4.91e-11 | 16 |
connective tissue | 2.22e-09 | 371 |
skin of body | 1.22e-08 | 41 |
dermis | 1.32e-08 | 9 |
dermatome | 1.32e-08 | 9 |
future dermis | 1.32e-08 | 9 |
nucleus pulposus | 6.27e-08 | 3 |
axial mesoderm | 6.27e-08 | 3 |
notochord | 6.27e-08 | 3 |
chordamesoderm | 6.27e-08 | 3 |
axial skeletal system | 1.11e-07 | 14 |
articulation | 1.19e-07 | 8 |
skeletal joint | 1.19e-07 | 8 |
articular system | 1.19e-07 | 8 |
hypodermis | 1.61e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.