FFCP PHASE1:Hg19::chr13:38145556..38145571,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10631|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16953|TSSclassifier=W|UniProt=|association_with_transcript=100bp_to_ENST00000497145_5end|coexpression_cluster_id=C349|description=CAGE_peak_3_at_POSTN_5end|id=chr13:38145556..38145571,-|ontology_enrichment_celltype=CL:0000055!2.82e-20!180;CL:0000057!2.08e-15!75;CL:0002334!2.29e-12!12;CL:0000680!8.72e-10!57;CL:0000056!8.72e-10!57;CL:0000355!8.72e-10!57;CL:0000048!1.62e-08!430;CL:0000723!2.23e-08!436;CL:0000187!3.18e-08!54;CL:0000034!4.57e-08!444;CL:0000183!5.93e-07!59;CL:0000393!9.96e-07!60;CL:0000211!9.96e-07!60|ontology_enrichment_celltype_v019=CL:0002334;2.69e-17;12!CL:1000306;8.61e-12;4!CL:0002547;8.61e-12;4!CL:0000135;2.13e-09;3!CL:0000388;2.13e-09;3!CL:0002580;2.86e-09;3!CL:0002570;1.78e-08;8|ontology_enrichment_celltype_v019_2=CL:0000057,4.73e-19,76;CL:0002334,2.52e-17,12;CL:1000306,7.74e-12,4;CL:0002547,7.74e-12,4;CL:0000135,2.36e-09,3;CL:0000388,2.36e-09,3;CL:0002580,4.60e-09,3;CL:0002570,1.53e-08,8|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!2.89e-10!14|ontology_enrichment_disease_v019=DOID:2394;6.50e-12;14|ontology_enrichment_disease_v019_2=DOID:2394,7.04e-12,14|ontology_enrichment_uberon=UBERON:0001134!2.03e-11!61;UBERON:0002036!2.03e-11!61;UBERON:0003082!2.03e-11!61;UBERON:0002385!9.12e-11!63;UBERON:0001015!9.12e-11!63;UBERON:0000383!9.12e-11!63;UBERON:0004290!8.27e-09!70;UBERON:0000914!5.31e-08!83;UBERON:0002329!5.31e-08!83;UBERON:0003077!5.31e-08!83;UBERON:0003059!5.31e-08!83;UBERON:0007282!5.31e-08!83;UBERON:0009618!5.31e-08!83;UBERON:0007285!5.31e-08!83;UBERON:0000486!6.28e-07!82|ontology_enrichment_uberon_v019=UBERON:0004797;8.61e-12;4!UBERON:0000415;8.61e-12;4!UBERON:0007240;8.61e-12;4!UBERON:0005742;8.61e-12;4!UBERON:0005734;8.61e-12;4!UBERON:0004664;8.61e-12;4!UBERON:0004663;8.61e-12;4!UBERON:0007846;2.13e-09;3!UBERON:0000043;2.13e-09;3!UBERON:0007845;2.13e-09;3|ontology_enrichment_uberon_v019_2=UBERON:0000415,7.74e-12,4;UBERON:0007240,7.74e-12,4;UBERON:0005742,7.74e-12,4;UBERON:0005734,7.74e-12,4;UBERON:0004664,7.74e-12,4;UBERON:0004663,7.74e-12,4;UBERON:0007846,2.36e-09,3;UBERON:0000043,2.36e-09,3;UBERON:0007845,2.36e-09,3;UBERON:0004797,9.62e-07,7|phase1_expression=0.181678379270557,0.856402095563933,0.563817616383885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.767175371061182,0.722878304769133,0.50133791063589,0.434539556882471,1.5905718941022,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,1.39293562831038,2.78059279707759,8.89193524321323,6.38403087957043,0.560677600142307,2.1349799145941,4.19334832309172,0,0.808264032418128,1.9615428373615,0,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,4.3104229600808,1.61450672119976,1.49490172172997,1.27159140695737,0.900273288253207,0.103052529238439,2.06112432036503,0.744467425326359,0.337552664482532,0,2.01947019395292,0.368199594569197,0,0.355009592516614,0.302256294682921,0.508681776931463,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,1.690605505112,0.531876233169741,0,0,0,0,0.714889968290738,0,0,0,0.355391948742546,0,7.23454504943007,2.61460037580088,40.9889263846434,0,0,0,1.91699884393266,1.14861935834114,0,0.723906533337896,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,2.70362119990049,4.28229573113188,1.26161932027148,0.117141414992713,0.300946099727719,0,0,1.99267679560631,0,0.173767228936166,0,0,0,0,0,0,0,0,4.21783273291921,1.07423381301644,8.70046292742528,2.94720043288112,0.511707249066704,12.3857519280578,0,1.54209693802656,2.84098760501003,0.492762936082855,2.07701771673448,1.85936605535935,0,0,0,0.68888668898764,2.36718518408732,0.917870904715969,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0.580024309752732,0.154048617114644,0.307007349452259,0.275673144969061,0.214840489736547,0.290033387828457,0.255679882248303,3.11612124763581,0.330569830721956,0,0,0,0,3.77774816196768,0,0,1.59691809095107,0,0,1.43124886741991,0,0,0.190630193923825,0,0,0.318203247925937,0.78494864019923,0,0.823611089208164,0.589062011728432,0.202182481573316,0,0.421258456238981,0,1.21856744815642,0,0.818999468447914,16.9686518344455,0,0,0,0.876901770507525,0,0,0,0.6196469961995,0,0,0,0.7133421029625,0,0.633322905892992,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,3.11039587661807,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10631 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16953 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=100bp_to_ENST00000497145_5end | |||
|coexpression_cluster_id=C349 | |||
|description=CAGE_peak_3_at_POSTN_5end | |||
|id=chr13:38145556..38145571,- | |||
|ontology_enrichment_celltype=CL:0000055!2.82e-20!180;CL:0000057!2.08e-15!75;CL:0002334!2.29e-12!12;CL:0000680!8.72e-10!57;CL:0000056!8.72e-10!57;CL:0000355!8.72e-10!57;CL:0000048!1.62e-08!430;CL:0000723!2.23e-08!436;CL:0000187!3.18e-08!54;CL:0000034!4.57e-08!444;CL:0000183!5.93e-07!59;CL:0000393!9.96e-07!60;CL:0000211!9.96e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.69e-17;12!CL:1000306;8.61e-12;4!CL:0002547;8.61e-12;4!CL:0000135;2.13e-09;3!CL:0000388;2.13e-09;3!CL:0002580;2.86e-09;3!CL:0002570;1.78e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.73e-19,76;CL:0002334,2.52e-17,12;CL:1000306,7.74e-12,4;CL:0002547,7.74e-12,4;CL:0000135,2.36e-09,3;CL:0000388,2.36e-09,3;CL:0002580,4.60e-09,3;CL:0002570,1.53e-08,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.89e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.50e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.04e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!2.03e-11!61;UBERON:0002036!2.03e-11!61;UBERON:0003082!2.03e-11!61;UBERON:0002385!9.12e-11!63;UBERON:0001015!9.12e-11!63;UBERON:0000383!9.12e-11!63;UBERON:0004290!8.27e-09!70;UBERON:0000914!5.31e-08!83;UBERON:0002329!5.31e-08!83;UBERON:0003077!5.31e-08!83;UBERON:0003059!5.31e-08!83;UBERON:0007282!5.31e-08!83;UBERON:0009618!5.31e-08!83;UBERON:0007285!5.31e-08!83;UBERON:0000486!6.28e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;8.61e-12;4!UBERON:0000415;8.61e-12;4!UBERON:0007240;8.61e-12;4!UBERON:0005742;8.61e-12;4!UBERON:0005734;8.61e-12;4!UBERON:0004664;8.61e-12;4!UBERON:0004663;8.61e-12;4!UBERON:0007846;2.13e-09;3!UBERON:0000043;2.13e-09;3!UBERON:0007845;2.13e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,7.74e-12,4;UBERON:0007240,7.74e-12,4;UBERON:0005742,7.74e-12,4;UBERON:0005734,7.74e-12,4;UBERON:0004664,7.74e-12,4;UBERON:0004663,7.74e-12,4;UBERON:0007846,2.36e-09,3;UBERON:0000043,2.36e-09,3;UBERON:0007845,2.36e-09,3;UBERON:0004797,9.62e-07,7 | |||
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|short_description=p3@POSTN | |||
}} |
Revision as of 02:09, 11 September 2013
Short description: | p3@POSTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_POSTN_5end |
Coexpression cluster: | C349_Mesothelial_Fibroblast_Preadipocyte_Ewing_mesenchymal_Skeletal_Smooth |
Association with transcript: | 100bp_to_ENST00000497145_5end |
EntrezGene: | POSTN |
HGNC: | 16953 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.73e-19 | 76 |
preadipocyte | 2.52e-17 | 12 |
fibroblast of tunica adventitia of artery | 7.74e-12 | 4 |
fibroblast of the aortic adventitia | 7.74e-12 | 4 |
fibrocyte | 2.36e-09 | 3 |
tendon cell | 2.36e-09 | 3 |
preadipocyte of the breast | 4.60e-09 | 3 |
mesenchymal stem cell of adipose | 1.53e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
artery wall | 7.74e-12 | 4 |
tunica adventitia of artery | 7.74e-12 | 4 |
adventitia | 7.74e-12 | 4 |
tunica adventitia of blood vessel | 7.74e-12 | 4 |
aorta tunica adventitia | 7.74e-12 | 4 |
aorta wall | 7.74e-12 | 4 |
dense regular connective tissue | 2.36e-09 | 3 |
tendon | 2.36e-09 | 3 |
regular connective tissue | 2.36e-09 | 3 |
blood vessel layer | 9.62e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.04e-12 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.