FFCP PHASE1:Hg19::chr13:89815478..89815491,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3389|description=CAGE_peak_at_chr13:89815478..89815491,-|id=chr13:89815478..89815491,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000054;2.74e-12;2!CL:0000137;2.74e-12;2!CL:0000092;2.74e-12;2|ontology_enrichment_celltype_v019_2=CL:0000054,2.59e-12,2;CL:0000137,2.59e-12,2;CL:0000092,2.59e-12,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:5409!1.74e-07!4;DOID:4468!1.88e-07!2|ontology_enrichment_disease_v019=DOID:0060085;3.67e-23;1!DOID:3165;3.67e-23;1!DOID:0060121;3.67e-23;1!DOID:2438;3.67e-23;1!DOID:4418;3.67e-23;1!DOID:200;2.74e-12;2!DOID:4305;2.74e-12;2!DOID:0060072;8.85e-07;4|ontology_enrichment_disease_v019_2=DOID:0060085,3.28e-23,1;DOID:3165,3.28e-23,1;DOID:0060121,3.28e-23,1;DOID:2438,3.28e-23,1;DOID:4418,3.28e-23,1;DOID:200,2.59e-12,2;DOID:4305,2.59e-12,2;DOID:0060072,8.61e-07,4|ontology_enrichment_uberon=UBERON:0002619!3.23e-20!22;UBERON:0001893!1.08e-18!34;UBERON:0001049!7.14e-18!57;UBERON:0005068!7.14e-18!57;UBERON:0006241!7.14e-18!57;UBERON:0007135!7.14e-18!57;UBERON:0001869!1.18e-17!32;UBERON:0000956!1.62e-17!25;UBERON:0000203!1.62e-17!25;UBERON:0002791!8.16e-17!33;UBERON:0001950!6.21e-16!20;UBERON:0000073!7.15e-16!94;UBERON:0001016!7.15e-16!94;UBERON:0002616!2.46e-15!59;UBERON:0000955!3.70e-15!69;UBERON:0006238!3.70e-15!69;UBERON:0002780!6.59e-15!41;UBERON:0001890!6.59e-15!41;UBERON:0006240!6.59e-15!41;UBERON:0001017!1.38e-14!82;UBERON:0003080!1.81e-14!42;UBERON:0002346!1.93e-14!90;UBERON:0002020!3.86e-14!34;UBERON:0003528!3.86e-14!34;UBERON:0003075!5.27e-14!86;UBERON:0007284!5.27e-14!86;UBERON:0005743!1.20e-13!86;UBERON:0001872!1.41e-10!5;UBERON:0007023!7.80e-10!115;UBERON:0000200!4.39e-09!6;UBERON:0003056!7.29e-09!61;UBERON:0000924!8.33e-09!173;UBERON:0006601!8.33e-09!173;UBERON:0004121!2.14e-08!169;UBERON:0001870!9.28e-08!2;UBERON:0001954!3.41e-07!2;UBERON:0003022!3.41e-07!2;UBERON:0002421!3.41e-07!2;UBERON:0002600!3.41e-07!2;UBERON:0000033!3.82e-07!123|ontology_enrichment_uberon_v019=UBERON:0002702;7.82e-45;2!UBERON:0001870;2.67e-30;3!UBERON:0001282;3.67e-23;1!UBERON:0009842;3.67e-23;1!UBERON:0003704;3.67e-23;1!UBERON:0001171;3.67e-23;1!UBERON:0001172;3.67e-23;1!UBERON:0000200;1.05e-15;6!UBERON:0001950;4.11e-10;20!UBERON:0002619;2.74e-09;22!UBERON:0002369;8.31e-09;3!UBERON:0001235;8.31e-09;3!UBERON:0006858;8.31e-09;3!UBERON:0001280;1.26e-08;3!UBERON:0004647;1.26e-08;3!UBERON:0000956;2.75e-08;25!UBERON:0000203;2.75e-08;25!UBERON:0000014;8.85e-07;4!UBERON:0002394;8.85e-07;4!UBERON:0003928;8.85e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002702,1.22e-44,2;UBERON:0001870,3.59e-30,3;UBERON:0001282,2.10e-23,1;UBERON:0009842,2.10e-23,1;UBERON:0003704,2.10e-23,1;UBERON:0001171,2.10e-23,1;UBERON:0001172,2.10e-23,1;UBERON:0000200,1.22e-15,6;UBERON:0001950,4.17e-10,20;UBERON:0002619,2.78e-09,22;UBERON:0002369,8.31e-09,3;UBERON:0001235,8.31e-09,3;UBERON:0006858,8.31e-09,3;UBERON:0001280,1.04e-08,3;UBERON:0004647,1.04e-08,3;UBERON:0005171,1.04e-08,3;UBERON:0000956,2.79e-08,25;UBERON:0000203,2.79e-08,25;UBERON:0000014,8.61e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600182192168805,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54941678891006,0.82509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74804275804612,0,0,0,0,0,0,0,0,0,0,0,4.36897878298248,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886642856860642,0,0,0,0,1.70913083770502,0,0.0897576444097721,0.760531603454056,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0.652931232636591,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0.548167698587004,1.58971689362392,0.569797163602908,0,0.400794101257669,0,0.39961921916426,0,0,0.171594997861965,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0.79522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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3389 | |||
|description=CAGE_peak_at_chr13:89815478..89815491,- | |||
|id=chr13:89815478..89815491,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000054;2.74e-12;2!CL:0000137;2.74e-12;2!CL:0000092;2.74e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,2.59e-12,2;CL:0000137,2.59e-12,2;CL:0000092,2.59e-12,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5409!1.74e-07!4;DOID:4468!1.88e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:0060085;3.67e-23;1!DOID:3165;3.67e-23;1!DOID:0060121;3.67e-23;1!DOID:2438;3.67e-23;1!DOID:4418;3.67e-23;1!DOID:200;2.74e-12;2!DOID:4305;2.74e-12;2!DOID:0060072;8.85e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,3.28e-23,1;DOID:3165,3.28e-23,1;DOID:0060121,3.28e-23,1;DOID:2438,3.28e-23,1;DOID:4418,3.28e-23,1;DOID:200,2.59e-12,2;DOID:4305,2.59e-12,2;DOID:0060072,8.61e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002619!3.23e-20!22;UBERON:0001893!1.08e-18!34;UBERON:0001049!7.14e-18!57;UBERON:0005068!7.14e-18!57;UBERON:0006241!7.14e-18!57;UBERON:0007135!7.14e-18!57;UBERON:0001869!1.18e-17!32;UBERON:0000956!1.62e-17!25;UBERON:0000203!1.62e-17!25;UBERON:0002791!8.16e-17!33;UBERON:0001950!6.21e-16!20;UBERON:0000073!7.15e-16!94;UBERON:0001016!7.15e-16!94;UBERON:0002616!2.46e-15!59;UBERON:0000955!3.70e-15!69;UBERON:0006238!3.70e-15!69;UBERON:0002780!6.59e-15!41;UBERON:0001890!6.59e-15!41;UBERON:0006240!6.59e-15!41;UBERON:0001017!1.38e-14!82;UBERON:0003080!1.81e-14!42;UBERON:0002346!1.93e-14!90;UBERON:0002020!3.86e-14!34;UBERON:0003528!3.86e-14!34;UBERON:0003075!5.27e-14!86;UBERON:0007284!5.27e-14!86;UBERON:0005743!1.20e-13!86;UBERON:0001872!1.41e-10!5;UBERON:0007023!7.80e-10!115;UBERON:0000200!4.39e-09!6;UBERON:0003056!7.29e-09!61;UBERON:0000924!8.33e-09!173;UBERON:0006601!8.33e-09!173;UBERON:0004121!2.14e-08!169;UBERON:0001870!9.28e-08!2;UBERON:0001954!3.41e-07!2;UBERON:0003022!3.41e-07!2;UBERON:0002421!3.41e-07!2;UBERON:0002600!3.41e-07!2;UBERON:0000033!3.82e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002702;7.82e-45;2!UBERON:0001870;2.67e-30;3!UBERON:0001282;3.67e-23;1!UBERON:0009842;3.67e-23;1!UBERON:0003704;3.67e-23;1!UBERON:0001171;3.67e-23;1!UBERON:0001172;3.67e-23;1!UBERON:0000200;1.05e-15;6!UBERON:0001950;4.11e-10;20!UBERON:0002619;2.74e-09;22!UBERON:0002369;8.31e-09;3!UBERON:0001235;8.31e-09;3!UBERON:0006858;8.31e-09;3!UBERON:0001280;1.26e-08;3!UBERON:0004647;1.26e-08;3!UBERON:0000956;2.75e-08;25!UBERON:0000203;2.75e-08;25!UBERON:0000014;8.85e-07;4!UBERON:0002394;8.85e-07;4!UBERON:0003928;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002702,1.22e-44,2;UBERON:0001870,3.59e-30,3;UBERON:0001282,2.10e-23,1;UBERON:0009842,2.10e-23,1;UBERON:0003704,2.10e-23,1;UBERON:0001171,2.10e-23,1;UBERON:0001172,2.10e-23,1;UBERON:0000200,1.22e-15,6;UBERON:0001950,4.17e-10,20;UBERON:0002619,2.78e-09,22;UBERON:0002369,8.31e-09,3;UBERON:0001235,8.31e-09,3;UBERON:0006858,8.31e-09,3;UBERON:0001280,1.04e-08,3;UBERON:0004647,1.04e-08,3;UBERON:0005171,1.04e-08,3;UBERON:0000956,2.79e-08,25;UBERON:0000203,2.79e-08,25;UBERON:0000014,8.61e-07,4 | |||
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|short_description=p@chr13:89815478..89815491,- | |||
}} |
Revision as of 02:57, 11 September 2013
Short description: | p@chr13:89815478..89815491, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:89815478..89815491, - |
Coexpression cluster: | C3389_acute_adrenal_fibrous_cholangiocellular_liposarcoma_choriocarcinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 2.59e-12 | 2 |
osteocyte | 2.59e-12 | 2 |
osteoclast | 2.59e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 1.22e-44 | 2 |
frontal cortex | 3.59e-30 | 3 |
intralobular bile duct | 2.10e-23 | 1 |
acinus | 2.10e-23 | 1 |
intrahepatic bile duct | 2.10e-23 | 1 |
portal lobule | 2.10e-23 | 1 |
hepatic acinus | 2.10e-23 | 1 |
gyrus | 1.22e-15 | 6 |
neocortex | 4.17e-10 | 20 |
regional part of cerebral cortex | 2.78e-09 | 22 |
adrenal gland | 8.31e-09 | 3 |
adrenal cortex | 8.31e-09 | 3 |
adrenal/interrenal gland | 8.31e-09 | 3 |
liver parenchyma | 1.04e-08 | 3 |
liver lobule | 1.04e-08 | 3 |
hepatic duct | 1.04e-08 | 3 |
cerebral cortex | 2.79e-08 | 25 |
pallium | 2.79e-08 | 25 |
zone of skin | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 3.28e-23 | 1 |
skin benign neoplasm | 3.28e-23 | 1 |
integumentary system benign neoplasm | 3.28e-23 | 1 |
dermis tumor | 3.28e-23 | 1 |
cutaneous fibrous histiocytoma | 3.28e-23 | 1 |
giant cell tumor | 2.59e-12 | 2 |
bone giant cell tumor | 2.59e-12 | 2 |
benign neoplasm | 8.61e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.