FFCP PHASE1:Hg19::chr14:75230699..75230706,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56252|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=17798|TSSclassifier=W|UniProt=Q86YA8|association_with_transcript=-1bp_to_BC044636_5end|description=CAGE_peak_6_at_YLPM1_5end|id=chr14:75230699..75230706,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002600;2.19e-09;2|ontology_enrichment_celltype_v019_2=CL:0002600,1.02e-09,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002780!2.93e-10!41;UBERON:0001890!2.93e-10!41;UBERON:0006240!2.93e-10!41;UBERON:0003080!1.19e-09!42;UBERON:0002791!2.68e-09!33;UBERON:0001049!3.25e-09!57;UBERON:0005068!3.25e-09!57;UBERON:0006241!3.25e-09!57;UBERON:0007135!3.25e-09!57;UBERON:0001893!4.39e-09!34;UBERON:0002020!7.64e-09!34;UBERON:0003528!7.64e-09!34;UBERON:0005743!2.88e-08!86;UBERON:0001869!3.76e-08!32;UBERON:0002616!4.40e-08!59;UBERON:0001017!7.13e-08!82;UBERON:0000073!1.29e-07!94;UBERON:0001016!1.29e-07!94;UBERON:0000956!3.97e-07!25;UBERON:0000203!3.97e-07!25;UBERON:0002346!4.08e-07!90;UBERON:0000955!6.65e-07!69;UBERON:0006238!6.65e-07!69|ontology_enrichment_uberon_v019=UBERON:0001950;7.77e-12;20!UBERON:0002619;1.08e-10;22!UBERON:0002780;3.14e-10;41!UBERON:0001890;3.14e-10;41!UBERON:0002791;5.33e-10;32!UBERON:0001893;1.34e-09;34!UBERON:0001869;1.47e-09;32!UBERON:0002771;2.19e-09;2!UBERON:0000007;2.19e-09;2!UBERON:0000956;2.61e-09;25!UBERON:0000203;2.61e-09;25!UBERON:0001017;3.48e-09;75!UBERON:0000073;2.17e-08;53!UBERON:0002616;2.17e-08;53!UBERON:0003528;2.46e-08;34!UBERON:0002020;2.46e-08;34!UBERON:0002021;4.06e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0002780,2.19e-14,41;UBERON:0001890,2.19e-14,41;UBERON:0003080,2.19e-14,41;UBERON:0006240,2.19e-14,41;UBERON:0001049,2.02e-13,56;UBERON:0005068,2.02e-13,56;UBERON:0006241,2.02e-13,56;UBERON:0007135,2.02e-13,56;UBERON:0000073,2.49e-12,53;UBERON:0002616,2.49e-12,53;UBERON:0001950,6.10e-12,20;UBERON:0002791,4.80e-11,32;UBERON:0001869,4.80e-11,32;UBERON:0002619,8.68e-11,22;UBERON:0001017,9.15e-11,81;UBERON:0003528,2.64e-10,34;UBERON:0002020,2.64e-10,34;UBERON:0001893,2.64e-10,34;UBERON:0000955,3.07e-10,68;UBERON:0006238,3.07e-10,68;UBERON:0002771,1.45e-09,2;UBERON:0000007,1.45e-09,2;UBERON:0000956,2.16e-09,25;UBERON:0000203,2.16e-09,25;UBERON:0001016,2.42e-09,89;UBERON:0002346,6.96e-09,86;UBERON:0003056,7.59e-09,61;UBERON:0003075,3.47e-08,82;UBERON:0007284,3.47e-08,82;UBERON:0002021,3.54e-08,5;UBERON:0007023,9.20e-07,114|phase1_expression=0.54503513781167,0.214100523890983,0.422863212287913,0,0,0.872338524100369,0,0,0.522371256399677,0.245733936501509,0.697801167972428,0.655324116390517,0,0.495065411840187,0,0,0,1.46062018077475,0,0,0.408001382488506,0,0.572471974262113,0.958120975510189,0.627713197974014,0.61130724598361,1.14940825229924,0.865818594450472,0,0,0,0,0,0,0.46480320348181,0.142169232487422,0,0,0.401088894940283,0.217010870715852,0.223915474239924,0,0.515151135268373,0.290796477559129,0.377875943688809,0,0.232429036905685,1.23350366406548,0.309706370895104,0.863077176966451,0,0.236482229888585,0,0.645484683583826,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0.598390972864896,0,0.290209238628584,0.56738522469114,0,0.502497330513487,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0.112328631146495,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0,0.382273228125229,0,0.560508562981536,0,0.196709770113833,1.57204305099666,0.616804496998528,0,0,0,0,0.557052284425868,0,0.221533894583621,0.270803863765016,1.0247305578054,0.390178042679635,0,0,0.869409257205157,0.593146252648242,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,1.00803371612366,0,0.289648807765598,2.43806866313962,0,0,0.722878304769133,0,0,0,0.973269740605272,0.189069634328136,0.443458794925128,0.527008714158756,0.327447688744282,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0.626984899610432,0,0,0,0.805658634218294,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,0,3.87780264148325,0.436094052142534,0,0.25326102332916,0.264818361626438,0.573673241497627,0,0,0,0,0,0,0.817309515567294,0.454072282934794,0.576175924479999,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.421352420106746,0.204154171254893,0.368502951935304,0.206651562351531,0,0,0.910161361938026,0.718618141816238,0,0.500474079487857,0,0,0,0.150238058906597,0.113432183160021,0.717558542755448,0.427114777637135,0,0.300091096084402,0.412210116953756,0,0,0,0,0.504867548488229,0.0920498986422993,0.161646056818812,0.355009592516614,0.201504196455281,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.414644220061482,0.504641701751257,2.18986415445498,0,0.643240938192885,0,0,0,0.236613600079688,0.337169380156203,0.482022059766964,0.330881918197182,0,0.474541238222193,0.269662616320329,0.196221465125346,0.769494313892781,0,0,0,1.47008711385542,0,0,0,0.441463099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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56252 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=17798 | |||
|TSSclassifier=W | |||
|UniProt=Q86YA8 | |||
|association_with_transcript=-1bp_to_BC044636_5end | |||
|description=CAGE_peak_6_at_YLPM1_5end | |||
|id=chr14:75230699..75230706,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002600;2.19e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002600,1.02e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!2.93e-10!41;UBERON:0001890!2.93e-10!41;UBERON:0006240!2.93e-10!41;UBERON:0003080!1.19e-09!42;UBERON:0002791!2.68e-09!33;UBERON:0001049!3.25e-09!57;UBERON:0005068!3.25e-09!57;UBERON:0006241!3.25e-09!57;UBERON:0007135!3.25e-09!57;UBERON:0001893!4.39e-09!34;UBERON:0002020!7.64e-09!34;UBERON:0003528!7.64e-09!34;UBERON:0005743!2.88e-08!86;UBERON:0001869!3.76e-08!32;UBERON:0002616!4.40e-08!59;UBERON:0001017!7.13e-08!82;UBERON:0000073!1.29e-07!94;UBERON:0001016!1.29e-07!94;UBERON:0000956!3.97e-07!25;UBERON:0000203!3.97e-07!25;UBERON:0002346!4.08e-07!90;UBERON:0000955!6.65e-07!69;UBERON:0006238!6.65e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;7.77e-12;20!UBERON:0002619;1.08e-10;22!UBERON:0002780;3.14e-10;41!UBERON:0001890;3.14e-10;41!UBERON:0002791;5.33e-10;32!UBERON:0001893;1.34e-09;34!UBERON:0001869;1.47e-09;32!UBERON:0002771;2.19e-09;2!UBERON:0000007;2.19e-09;2!UBERON:0000956;2.61e-09;25!UBERON:0000203;2.61e-09;25!UBERON:0001017;3.48e-09;75!UBERON:0000073;2.17e-08;53!UBERON:0002616;2.17e-08;53!UBERON:0003528;2.46e-08;34!UBERON:0002020;2.46e-08;34!UBERON:0002021;4.06e-08;5 | |||
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| |||
|short_description=p6@YLPM1 | |||
}} |
Revision as of 05:32, 11 September 2013
Short description: | p6@YLPM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_YLPM1_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_BC044636_5end |
EntrezGene: | YLPM1 |
HGNC: | 17798 |
UniProt: | Q86YA8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of trachea | 1.02e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 2.19e-14 | 41 |
forebrain | 2.19e-14 | 41 |
anterior neural tube | 2.19e-14 | 41 |
future forebrain | 2.19e-14 | 41 |
neural tube | 2.02e-13 | 56 |
neural rod | 2.02e-13 | 56 |
future spinal cord | 2.02e-13 | 56 |
neural keel | 2.02e-13 | 56 |
regional part of nervous system | 2.49e-12 | 53 |
regional part of brain | 2.49e-12 | 53 |
neocortex | 6.10e-12 | 20 |
regional part of telencephalon | 4.80e-11 | 32 |
cerebral hemisphere | 4.80e-11 | 32 |
regional part of cerebral cortex | 8.68e-11 | 22 |
central nervous system | 9.15e-11 | 81 |
brain grey matter | 2.64e-10 | 34 |
gray matter | 2.64e-10 | 34 |
telencephalon | 2.64e-10 | 34 |
brain | 3.07e-10 | 68 |
future brain | 3.07e-10 | 68 |
middle temporal gyrus | 1.45e-09 | 2 |
pituitary gland | 1.45e-09 | 2 |
cerebral cortex | 2.16e-09 | 25 |
pallium | 2.16e-09 | 25 |
nervous system | 2.42e-09 | 89 |
neurectoderm | 6.96e-09 | 86 |
pre-chordal neural plate | 7.59e-09 | 61 |
neural plate | 3.47e-08 | 82 |
presumptive neural plate | 3.47e-08 | 82 |
occipital lobe | 3.54e-08 | 5 |
adult organism | 9.20e-07 | 114 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.