FFCP PHASE1:Hg19::chr15:34502197..34502207,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79768|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26199|TSSclassifier=S|UniProt=|association_with_transcript=4bp_to_ENST00000557877_5end|description=CAGE_peak_4_at_C15orf29_5end|id=chr15:34502197..34502207,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;1.15e-11;3!UBERON:0004140;2.24e-09;1!UBERON:0005425;2.24e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:9119;2.24e-09;1|ontology_enrichment_disease_v019_2=DOID:9119,1.56e-09,1|ontology_enrichment_uberon=UBERON:0001049!4.13e-15!57;UBERON:0005068!4.13e-15!57;UBERON:0006241!4.13e-15!57;UBERON:0007135!4.13e-15!57;UBERON:0007023!4.55e-15!115;UBERON:0000073!2.12e-13!94;UBERON:0001016!2.12e-13!94;UBERON:0001017!1.26e-12!82;UBERON:0005743!3.70e-12!86;UBERON:0002616!3.74e-12!59;UBERON:0002020!7.15e-12!34;UBERON:0003528!7.15e-12!34;UBERON:0001893!1.64e-11!34;UBERON:0002791!2.73e-11!33;UBERON:0002346!3.26e-11!90;UBERON:0000955!5.13e-11!69;UBERON:0006238!5.13e-11!69;UBERON:0003075!9.66e-11!86;UBERON:0007284!9.66e-11!86;UBERON:0001869!1.42e-10!32;UBERON:0003080!4.65e-10!42;UBERON:0002780!1.81e-09!41;UBERON:0001890!1.81e-09!41;UBERON:0006240!1.81e-09!41;UBERON:0000924!3.99e-09!173;UBERON:0006601!3.99e-09!173;UBERON:0004121!1.09e-08!169;UBERON:0000956!1.27e-07!25;UBERON:0000203!1.27e-07!25;UBERON:0000153!2.92e-07!129;UBERON:0007811!2.92e-07!129;UBERON:0000033!3.04e-07!123;UBERON:0002619!7.13e-07!22|ontology_enrichment_uberon_v019=UBERON:0000941;2.24e-09;1!UBERON:0001785;2.24e-09;1!UBERON:0002464;2.24e-09;1!UBERON:0004904;2.24e-09;1!UBERON:0001021;2.24e-09;1!UBERON:0001872;2.43e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.21e-09,1;UBERON:0001785,1.21e-09,1;UBERON:0002464,1.21e-09,1;UBERON:0004904,1.21e-09,1;UBERON:0001021,1.21e-09,1;UBERON:0003902,1.21e-09,1;UBERON:0005425,1.21e-09,1;UBERON:0001872,2.21e-07,5;UBERON:0001016,3.50e-07,89|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0.572471974262113,0.136874425072884,0.627713197974014,0.152826811495903,0.0821005894499457,0,0.393364276848904,0,0,0,0,0.369754010166788,0.0774672005803016,0.426507697462265,0.587200878669695,0,0.401088894940283,0.217010870715852,0,0.647787332037959,0.77272670290256,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,1.32171328579026,0,1.31692042387539,0,0,0,0.167186495390678,0.651844533267181,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0,0.318565414324097,0.651083453856419,0.950452044448374,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0.973269740605272,0.0945348171640679,0,0.175669571386252,0.458426764241994,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0.476981248610684,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.267899184852239,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0,0.25326102332916,0,0,0,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0.23486899728753,0,0,0,0.122834317311768,0.309977343527296,0,0,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0,0.150238058906597,0.226864366320042,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0,0.337552664482532,0.194874010322397,0,0.184099797284599,0.161646056818812,0.710019185033229,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0.731842236777572,0.795178609928912,0.813357600086629,0.414644220061482,0.252320850875628,0.72995471815166,0,0,0,0.464367928031979,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0.491953754172454,0.171567810298526,0.219500570817251,0,0.603173834469785,0.462942225792648,0,0,0,0.34779121492523,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0.93733833986777,0.16798212819886,0.567100388969546,0.358234090811393,0,0,0.492663237895943,0.088048434013226,0,0.576479813667846,0.12624243342638,0.253991577168676,0.381988425558278,0,0,0.102827492703324,0,0.571652865261156,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0.514414748524284,0,0.266422179016099,0.285955987316295,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.410952645100767,0.358121926479791,0.224170287987055,0.197030760201927,0.215627574859517,0,0.254094624222463,0,0,0.167516265334349,1.27587750330633,0.749007023947182,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0.61384789315225,0.280660094433074,0.256278298511402,0.511707249066704,0,0,0,0,0.0821271560138091,0,0.232420756919918,0.362578348774867,0,0,0.114814448164607,0,0,0.902399225814824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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79768 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26199 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=4bp_to_ENST00000557877_5end | |||
|description=CAGE_peak_4_at_C15orf29_5end | |||
|id=chr15:34502197..34502207,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.15e-11;3!UBERON:0004140;2.24e-09;1!UBERON:0005425;2.24e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:9119;2.24e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,1.56e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.13e-15!57;UBERON:0005068!4.13e-15!57;UBERON:0006241!4.13e-15!57;UBERON:0007135!4.13e-15!57;UBERON:0007023!4.55e-15!115;UBERON:0000073!2.12e-13!94;UBERON:0001016!2.12e-13!94;UBERON:0001017!1.26e-12!82;UBERON:0005743!3.70e-12!86;UBERON:0002616!3.74e-12!59;UBERON:0002020!7.15e-12!34;UBERON:0003528!7.15e-12!34;UBERON:0001893!1.64e-11!34;UBERON:0002791!2.73e-11!33;UBERON:0002346!3.26e-11!90;UBERON:0000955!5.13e-11!69;UBERON:0006238!5.13e-11!69;UBERON:0003075!9.66e-11!86;UBERON:0007284!9.66e-11!86;UBERON:0001869!1.42e-10!32;UBERON:0003080!4.65e-10!42;UBERON:0002780!1.81e-09!41;UBERON:0001890!1.81e-09!41;UBERON:0006240!1.81e-09!41;UBERON:0000924!3.99e-09!173;UBERON:0006601!3.99e-09!173;UBERON:0004121!1.09e-08!169;UBERON:0000956!1.27e-07!25;UBERON:0000203!1.27e-07!25;UBERON:0000153!2.92e-07!129;UBERON:0007811!2.92e-07!129;UBERON:0000033!3.04e-07!123;UBERON:0002619!7.13e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.24e-09;1!UBERON:0001785;2.24e-09;1!UBERON:0002464;2.24e-09;1!UBERON:0004904;2.24e-09;1!UBERON:0001021;2.24e-09;1!UBERON:0001872;2.43e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.21e-09,1;UBERON:0001785,1.21e-09,1;UBERON:0002464,1.21e-09,1;UBERON:0004904,1.21e-09,1;UBERON:0001021,1.21e-09,1;UBERON:0003902,1.21e-09,1;UBERON:0005425,1.21e-09,1;UBERON:0001872,2.21e-07,5;UBERON:0001016,3.50e-07,89 | |||
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| |||
|short_description=p4@C15orf29 | |||
}} |
Revision as of 06:39, 11 September 2013
Short description: | p4@C15orf29 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_C15orf29_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_ENST00000557877_5end |
EntrezGene: | C15orf29 |
HGNC: | 26199 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.21e-09 | 1 |
cranial nerve | 1.21e-09 | 1 |
nerve trunk | 1.21e-09 | 1 |
nerve connecting eye with brain | 1.21e-09 | 1 |
nerve | 1.21e-09 | 1 |
retinal neural layer | 1.21e-09 | 1 |
presumptive neural retina | 1.21e-09 | 1 |
parietal lobe | 2.21e-07 | 5 |
nervous system | 3.50e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 1.56e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.