FFCP PHASE1:Hg19::chr15:50411908..50411922,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79895|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13536|TSSclassifier=N|UniProt=|association_with_transcript=-254bp_to_ENST00000560437_5end|coexpression_cluster_id=C80|description=CAGE_peak_6_at_ATP8B4_5end|id=chr15:50411908..50411922,-|ontology_enrichment_celltype=CL:0000763!2.34e-53!112;CL:0000049!2.34e-53!112;CL:0000557!7.92e-50!71;CL:0000766!4.91e-48!76;CL:0000839!3.22e-44!70;CL:0002009!4.79e-44!65;CL:0000037!8.58e-42!172;CL:0000566!8.58e-42!172;CL:0002194!1.06e-41!63;CL:0000576!1.06e-41!63;CL:0000040!1.06e-41!63;CL:0000559!1.06e-41!63;CL:0000988!1.82e-41!182;CL:0002032!6.68e-40!165;CL:0000837!6.68e-40!165;CL:0000738!7.86e-33!140;CL:0002031!2.16e-30!124;CL:0000860!4.33e-30!45;CL:0002057!3.64e-28!42;CL:0002087!1.92e-27!119;CL:0000235!4.74e-09!10;CL:0000840!3.95e-08!5;CL:0001029!3.95e-08!5;CL:0000134!2.42e-07!358;CL:0002320!8.75e-07!365|ontology_enrichment_celltype_v019=CL:0000473;1.38e-34;39!CL:0000234;1.38e-34;39!CL:0000860;3.26e-31;33!CL:0002057;3.26e-31;33!CL:0000576;1.05e-16;48!CL:0000763;2.03e-14;100!CL:0000235;3.73e-14;6!CL:0000766;5.60e-14;69!CL:0000840;4.39e-09;5|ontology_enrichment_celltype_v019_2=CL:0000763,3.66e-48,108;CL:0000049,3.66e-48,108;CL:0000557,2.94e-41,67;CL:0002009,1.28e-39,61;CL:0000473,4.27e-39,48;CL:0000234,4.27e-39,48;CL:0002194,5.09e-38,59;CL:0000576,5.09e-38,59;CL:0000040,5.09e-38,59;CL:0000559,5.09e-38,59;CL:0000766,2.18e-37,72;CL:0000839,5.24e-36,66;CL:0002032,3.37e-32,161;CL:0000837,3.37e-32,161;CL:0000037,3.55e-32,168;CL:0000988,1.61e-31,177;CL:0000860,1.75e-28,42;CL:0002057,1.75e-28,42;CL:0002031,6.25e-21,120;CL:0000738,3.02e-20,136;CL:0002087,7.07e-19,115;CL:0000235,5.26e-14,6;CL:0000134,1.81e-09,354;CL:0000840,4.36e-09,5;CL:0001029,4.36e-09,5;CL:0002320,4.45e-09,361;CL:0000219,1.04e-07,386;CL:0000034,3.75e-07,441|ontology_enrichment_development_v019=CL:0002057;2.37e-21;42!CL:0000049;3.03e-13;108|ontology_enrichment_disease=DOID:8692!2.28e-09!31;DOID:1240!3.96e-07!39|ontology_enrichment_disease_v019=DOID:8692;2.17e-08;31|ontology_enrichment_disease_v019_2=DOID:8692,6.85e-09,31|ontology_enrichment_uberon=UBERON:0002390!3.91e-49!102;UBERON:0003061!3.91e-49!102;UBERON:0002371!6.79e-44!80;UBERON:0002193!9.28e-44!112;UBERON:0001474!2.37e-39!86;UBERON:0004765!1.23e-31!101;UBERON:0001434!1.23e-31!101;UBERON:0002405!4.63e-31!115;UBERON:0003081!1.29e-16!216;UBERON:0002204!9.32e-13!167;UBERON:0007023!6.58e-09!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.91e-38,76;UBERON:0002390,6.09e-36,98;UBERON:0003061,6.09e-36,98;UBERON:0001474,9.61e-35,82;UBERON:0002405,6.01e-34,93;UBERON:0002193,9.12e-32,108;UBERON:0004765,6.36e-31,90;UBERON:0001434,5.29e-27,100;UBERON:0003081,1.34e-13,203;UBERON:0002204,6.83e-13,167;UBERON:0002384,1.52e-08,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,1.15148819429164,0.154816123316076,0,0,0,0,0,8.22081230137572,0,0.401088894940283,1.08505435357926,0.223915474239924,0,0.257575567634187,1.74477886535478,0.377875943688809,0.727752183563449,4.41615170120801,1.23350366406548,13.9367866902797,1.43846196161075,0.512321413058201,1.6553756092201,2.75796544589295,1.29096936716765,2.70852973188684,3.38836211176688,2.72906150057846,5.61808711112712,2.14258724659632,0.962787081228281,1.91801137739712,0.659702600373432,0.398927315243264,0.426224750532694,0.870627715885752,0,1.24564449799115,9.2962006144995,2.08593167368081,7.8187984093842,1.81619850790011,1.10483290796269,0.316462387440884,0,0,0,0.336985893439485,0.450530678524519,0.48217676009124,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,2.64342657158052,1.12101712596307,3.423993102076,0,0,0,0,0,0,0,2.00538822393312,0,0,0,0.25618263945135,0.130059347559878,2.63100647365882,0.829050053357545,2.02862160014537,0,0,0,2.26618685395132,0,0,0,0,0.651083453856419,0.950452044448374,0,0,0,0,0,0.604820229674197,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,2.59637914923747,1.56716763569341,2.12732736830184,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,5.41677413392274,17.7843241505821,5.7966153292604,0,0,0,0,0,0,6.89728533054321,0.528290604079356,0.207328115540772,0.288239906833923,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0.112085143993527,2.56139988262505,0.431255149719035,2.05348858047597,0,0,0,0,0,0,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79895 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13536 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-254bp_to_ENST00000560437_5end | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_6_at_ATP8B4_5end | |||
|id=chr15:50411908..50411922,- | |||
|ontology_enrichment_celltype=CL:0000763!2.34e-53!112;CL:0000049!2.34e-53!112;CL:0000557!7.92e-50!71;CL:0000766!4.91e-48!76;CL:0000839!3.22e-44!70;CL:0002009!4.79e-44!65;CL:0000037!8.58e-42!172;CL:0000566!8.58e-42!172;CL:0002194!1.06e-41!63;CL:0000576!1.06e-41!63;CL:0000040!1.06e-41!63;CL:0000559!1.06e-41!63;CL:0000988!1.82e-41!182;CL:0002032!6.68e-40!165;CL:0000837!6.68e-40!165;CL:0000738!7.86e-33!140;CL:0002031!2.16e-30!124;CL:0000860!4.33e-30!45;CL:0002057!3.64e-28!42;CL:0002087!1.92e-27!119;CL:0000235!4.74e-09!10;CL:0000840!3.95e-08!5;CL:0001029!3.95e-08!5;CL:0000134!2.42e-07!358;CL:0002320!8.75e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.38e-34;39!CL:0000234;1.38e-34;39!CL:0000860;3.26e-31;33!CL:0002057;3.26e-31;33!CL:0000576;1.05e-16;48!CL:0000763;2.03e-14;100!CL:0000235;3.73e-14;6!CL:0000766;5.60e-14;69!CL:0000840;4.39e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.66e-48,108;CL:0000049,3.66e-48,108;CL:0000557,2.94e-41,67;CL:0002009,1.28e-39,61;CL:0000473,4.27e-39,48;CL:0000234,4.27e-39,48;CL:0002194,5.09e-38,59;CL:0000576,5.09e-38,59;CL:0000040,5.09e-38,59;CL:0000559,5.09e-38,59;CL:0000766,2.18e-37,72;CL:0000839,5.24e-36,66;CL:0002032,3.37e-32,161;CL:0000837,3.37e-32,161;CL:0000037,3.55e-32,168;CL:0000988,1.61e-31,177;CL:0000860,1.75e-28,42;CL:0002057,1.75e-28,42;CL:0002031,6.25e-21,120;CL:0000738,3.02e-20,136;CL:0002087,7.07e-19,115;CL:0000235,5.26e-14,6;CL:0000134,1.81e-09,354;CL:0000840,4.36e-09,5;CL:0001029,4.36e-09,5;CL:0002320,4.45e-09,361;CL:0000219,1.04e-07,386;CL:0000034,3.75e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.37e-21;42!CL:0000049;3.03e-13;108 | |||
|ontology_enrichment_disease=DOID:8692!2.28e-09!31;DOID:1240!3.96e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.17e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.85e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.91e-49!102;UBERON:0003061!3.91e-49!102;UBERON:0002371!6.79e-44!80;UBERON:0002193!9.28e-44!112;UBERON:0001474!2.37e-39!86;UBERON:0004765!1.23e-31!101;UBERON:0001434!1.23e-31!101;UBERON:0002405!4.63e-31!115;UBERON:0003081!1.29e-16!216;UBERON:0002204!9.32e-13!167;UBERON:0007023!6.58e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.91e-38,76;UBERON:0002390,6.09e-36,98;UBERON:0003061,6.09e-36,98;UBERON:0001474,9.61e-35,82;UBERON:0002405,6.01e-34,93;UBERON:0002193,9.12e-32,108;UBERON:0004765,6.36e-31,90;UBERON:0001434,5.29e-27,100;UBERON:0003081,1.34e-13,203;UBERON:0002204,6.83e-13,167;UBERON:0002384,1.52e-08,371 | |||
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|short_description=p6@ATP8B4 | |||
}} |
Revision as of 07:19, 11 September 2013
Short description: | p6@ATP8B4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_ATP8B4_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | -254bp_to_ENST00000560437_5end |
EntrezGene: | ATP8B4 |
HGNC: | 13536 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.66e-48 | 108 |
common myeloid progenitor | 3.66e-48 | 108 |
granulocyte monocyte progenitor cell | 2.94e-41 | 67 |
macrophage dendritic cell progenitor | 1.28e-39 | 61 |
defensive cell | 4.27e-39 | 48 |
phagocyte | 4.27e-39 | 48 |
monopoietic cell | 5.09e-38 | 59 |
monocyte | 5.09e-38 | 59 |
monoblast | 5.09e-38 | 59 |
promonocyte | 5.09e-38 | 59 |
myeloid leukocyte | 2.18e-37 | 72 |
myeloid lineage restricted progenitor cell | 5.24e-36 | 66 |
hematopoietic oligopotent progenitor cell | 3.37e-32 | 161 |
hematopoietic multipotent progenitor cell | 3.37e-32 | 161 |
hematopoietic stem cell | 3.55e-32 | 168 |
hematopoietic cell | 1.61e-31 | 177 |
classical monocyte | 1.75e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.75e-28 | 42 |
hematopoietic lineage restricted progenitor cell | 6.25e-21 | 120 |
leukocyte | 3.02e-20 | 136 |
nongranular leukocyte | 7.07e-19 | 115 |
macrophage | 5.26e-14 | 6 |
mesenchymal cell | 1.81e-09 | 354 |
immature conventional dendritic cell | 4.36e-09 | 5 |
common dendritic progenitor | 4.36e-09 | 5 |
connective tissue cell | 4.45e-09 | 361 |
motile cell | 1.04e-07 | 386 |
stem cell | 3.75e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.91e-38 | 76 |
hematopoietic system | 6.09e-36 | 98 |
blood island | 6.09e-36 | 98 |
bone element | 9.61e-35 | 82 |
immune system | 6.01e-34 | 93 |
hemolymphoid system | 9.12e-32 | 108 |
skeletal element | 6.36e-31 | 90 |
skeletal system | 5.29e-27 | 100 |
lateral plate mesoderm | 1.34e-13 | 203 |
musculoskeletal system | 6.83e-13 | 167 |
connective tissue | 1.52e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.85e-09 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.