FFCP PHASE1:Hg19::chr15:58571445..58571478,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8854|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15472|TSSclassifier=N|UniProt=|association_with_transcript=0bp_to_ENST00000558073,ENST00000558231,ENST00000560122,uc010ugw.1_5end|description=CAGE_peak_16_at_ALDH1A2_5end|id=chr15:58571445..58571478,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000182;1.67e-07;12|ontology_enrichment_celltype_v019_2=CL:0000182,1.57e-07,12|ontology_enrichment_development_v019=UBERON:0010227;2.30e-21;1!UBERON:0005062;7.36e-21;4!UBERON:0007284;7.36e-21;4!UBERON:0003056;6.56e-08;3!UBERON:0006215;8.02e-08;3|ontology_enrichment_disease=DOID:1909!5.66e-11!2|ontology_enrichment_disease_v019=DOID:1909;1.82e-11;2|ontology_enrichment_disease_v019_2=DOID:1909,1.82e-11,2|ontology_enrichment_uberon=UBERON:0007023!1.56e-23!115;UBERON:0002619!3.60e-22!22;UBERON:0003075!7.92e-21!86;UBERON:0007284!7.92e-21!86;UBERON:0001869!8.92e-21!32;UBERON:0002346!1.09e-19!90;UBERON:0001893!1.97e-19!34;UBERON:0000956!2.32e-19!25;UBERON:0000203!2.32e-19!25;UBERON:0001049!4.34e-19!57;UBERON:0005068!4.34e-19!57;UBERON:0006241!4.34e-19!57;UBERON:0007135!4.34e-19!57;UBERON:0002780!2.46e-18!41;UBERON:0001890!2.46e-18!41;UBERON:0006240!2.46e-18!41;UBERON:0002616!2.52e-18!59;UBERON:0003080!7.71e-18!42;UBERON:0002791!5.22e-17!33;UBERON:0000955!7.61e-17!69;UBERON:0006238!7.61e-17!69;UBERON:0002020!1.88e-16!34;UBERON:0003528!1.88e-16!34;UBERON:0005743!2.25e-16!86;UBERON:0001950!4.39e-16!20;UBERON:0003056!2.16e-15!61;UBERON:0001017!2.17e-15!82;UBERON:0000073!1.96e-14!94;UBERON:0001016!1.96e-14!94;UBERON:0000200!1.67e-12!6;UBERON:0004121!2.83e-11!169;UBERON:0002133!3.30e-11!2;UBERON:0002081!3.46e-11!2;UBERON:0000924!6.82e-11!173;UBERON:0006601!6.82e-11!173;UBERON:0001954!6.88e-11!2;UBERON:0003022!6.88e-11!2;UBERON:0002421!6.88e-11!2;UBERON:0002600!6.88e-11!2;UBERON:0000033!3.54e-10!123;UBERON:0000153!1.63e-09!129;UBERON:0007811!1.63e-09!129;UBERON:0000349!4.27e-09!5;UBERON:0001872!8.73e-09!5;UBERON:0000025!1.93e-08!194;UBERON:0003978!9.74e-08!3;UBERON:0009751!9.74e-08!3;UBERON:0000946!9.74e-08!3;UBERON:0002523!9.74e-08!3;UBERON:0005983!9.74e-08!3;UBERON:0002165!9.74e-08!3;UBERON:0002062!9.74e-08!3;UBERON:0007280!9.74e-08!3;UBERON:0004151!1.01e-07!3;UBERON:0000483!4.15e-07!309;UBERON:0002771!5.55e-07!3;UBERON:0000119!5.58e-07!312|ontology_enrichment_uberon_v019=UBERON:0002081;1.49e-40;2!UBERON:0002133;1.49e-40;2!UBERON:0003978;1.95e-27;3!UBERON:0004151;1.95e-27;3!UBERON:0000946;1.95e-27;3!UBERON:0002079;2.30e-21;1!UBERON:0002135;2.30e-21;1!UBERON:0002134;4.67e-21;1!UBERON:0005208;4.67e-21;1!UBERON:0004145;4.67e-21;1!UBERON:0005946;4.67e-21;1!UBERON:0005965;4.67e-21;1!UBERON:0002078;4.67e-21;1!UBERON:0001954;2.23e-11;2!UBERON:0003022;2.23e-11;2!UBERON:0002421;2.23e-11;2!UBERON:0002600;2.23e-11;2!UBERON:0010313;6.16e-09;10!UBERON:0000948;8.14e-09;22!UBERON:0007100;7.94e-08;25|ontology_enrichment_uberon_v019_2=UBERON:0002133,1.34e-40,2;UBERON:0002081,1.64e-40,2;UBERON:0010227,1.64e-40,2;UBERON:0003978,1.82e-27,3;UBERON:0009751,1.82e-27,3;UBERON:0000946,1.82e-27,3;UBERON:0002523,1.82e-27,3;UBERON:0005983,1.82e-27,3;UBERON:0002165,1.82e-27,3;UBERON:0002062,1.82e-27,3;UBERON:0007280,1.82e-27,3;UBERON:0004151,2.08e-27,3;UBERON:0002135,1.88e-21,1;UBERON:0002079,2.30e-21,1;UBERON:0002134,5.16e-21,1;UBERON:0005208,5.16e-21,1;UBERON:0005946,5.16e-21,1;UBERON:0005965,5.16e-21,1;UBERON:0002078,5.16e-21,1;UBERON:0004797,2.24e-12,7;UBERON:0001954,2.47e-11,2;UBERON:0003022,2.47e-11,2;UBERON:0002421,2.47e-11,2;UBERON:0002600,2.47e-11,2;UBERON:0010313,6.04e-09,10;UBERON:0002342,6.04e-09,10;UBERON:0005062,6.04e-09,10;UBERON:0000948,3.91e-08,24;UBERON:0005498,3.91e-08,24;UBERON:0004140,3.91e-08,24;UBERON:0009881,3.91e-08,24;UBERON:0004141,3.91e-08,24;UBERON:0003084,3.91e-08,24;UBERON:0007005,3.91e-08,24;UBERON:0004139,3.91e-08,24;UBERON:0004291,3.91e-08,24;UBERON:0004145,6.78e-08,3;UBERON:0007100,2.71e-07,27|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,1.77236972004421,0.441463099414651,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380987365753014,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8854 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15472 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000558073,ENST00000558231,ENST00000560122,uc010ugw.1_5end | |||
|description=CAGE_peak_16_at_ALDH1A2_5end | |||
|id=chr15:58571445..58571478,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.67e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.57e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.30e-21;1!UBERON:0005062;7.36e-21;4!UBERON:0007284;7.36e-21;4!UBERON:0003056;6.56e-08;3!UBERON:0006215;8.02e-08;3 | |||
|ontology_enrichment_disease=DOID:1909!5.66e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.82e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.82e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.56e-23!115;UBERON:0002619!3.60e-22!22;UBERON:0003075!7.92e-21!86;UBERON:0007284!7.92e-21!86;UBERON:0001869!8.92e-21!32;UBERON:0002346!1.09e-19!90;UBERON:0001893!1.97e-19!34;UBERON:0000956!2.32e-19!25;UBERON:0000203!2.32e-19!25;UBERON:0001049!4.34e-19!57;UBERON:0005068!4.34e-19!57;UBERON:0006241!4.34e-19!57;UBERON:0007135!4.34e-19!57;UBERON:0002780!2.46e-18!41;UBERON:0001890!2.46e-18!41;UBERON:0006240!2.46e-18!41;UBERON:0002616!2.52e-18!59;UBERON:0003080!7.71e-18!42;UBERON:0002791!5.22e-17!33;UBERON:0000955!7.61e-17!69;UBERON:0006238!7.61e-17!69;UBERON:0002020!1.88e-16!34;UBERON:0003528!1.88e-16!34;UBERON:0005743!2.25e-16!86;UBERON:0001950!4.39e-16!20;UBERON:0003056!2.16e-15!61;UBERON:0001017!2.17e-15!82;UBERON:0000073!1.96e-14!94;UBERON:0001016!1.96e-14!94;UBERON:0000200!1.67e-12!6;UBERON:0004121!2.83e-11!169;UBERON:0002133!3.30e-11!2;UBERON:0002081!3.46e-11!2;UBERON:0000924!6.82e-11!173;UBERON:0006601!6.82e-11!173;UBERON:0001954!6.88e-11!2;UBERON:0003022!6.88e-11!2;UBERON:0002421!6.88e-11!2;UBERON:0002600!6.88e-11!2;UBERON:0000033!3.54e-10!123;UBERON:0000153!1.63e-09!129;UBERON:0007811!1.63e-09!129;UBERON:0000349!4.27e-09!5;UBERON:0001872!8.73e-09!5;UBERON:0000025!1.93e-08!194;UBERON:0003978!9.74e-08!3;UBERON:0009751!9.74e-08!3;UBERON:0000946!9.74e-08!3;UBERON:0002523!9.74e-08!3;UBERON:0005983!9.74e-08!3;UBERON:0002165!9.74e-08!3;UBERON:0002062!9.74e-08!3;UBERON:0007280!9.74e-08!3;UBERON:0004151!1.01e-07!3;UBERON:0000483!4.15e-07!309;UBERON:0002771!5.55e-07!3;UBERON:0000119!5.58e-07!312 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002133,1.34e-40,2;UBERON:0002081,1.64e-40,2;UBERON:0010227,1.64e-40,2;UBERON:0003978,1.82e-27,3;UBERON:0009751,1.82e-27,3;UBERON:0000946,1.82e-27,3;UBERON:0002523,1.82e-27,3;UBERON:0005983,1.82e-27,3;UBERON:0002165,1.82e-27,3;UBERON:0002062,1.82e-27,3;UBERON:0007280,1.82e-27,3;UBERON:0004151,2.08e-27,3;UBERON:0002135,1.88e-21,1;UBERON:0002079,2.30e-21,1;UBERON:0002134,5.16e-21,1;UBERON:0005208,5.16e-21,1;UBERON:0005946,5.16e-21,1;UBERON:0005965,5.16e-21,1;UBERON:0002078,5.16e-21,1;UBERON:0004797,2.24e-12,7;UBERON:0001954,2.47e-11,2;UBERON:0003022,2.47e-11,2;UBERON:0002421,2.47e-11,2;UBERON:0002600,2.47e-11,2;UBERON:0010313,6.04e-09,10;UBERON:0002342,6.04e-09,10;UBERON:0005062,6.04e-09,10;UBERON:0000948,3.91e-08,24;UBERON:0005498,3.91e-08,24;UBERON:0004140,3.91e-08,24;UBERON:0009881,3.91e-08,24;UBERON:0004141,3.91e-08,24;UBERON:0003084,3.91e-08,24;UBERON:0007005,3.91e-08,24;UBERON:0004139,3.91e-08,24;UBERON:0004291,3.91e-08,24;UBERON:0004145,6.78e-08,3;UBERON:0007100,2.71e-07,27 | |||
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|short_description=p16@ALDH1A2 | |||
}} |
Revision as of 07:37, 11 September 2013
Short description: | p16@ALDH1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_ALDH1A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000558073, ENST00000558231, ENST00000560122, uc010ugw.1_5end |
EntrezGene: | ALDH1A2 |
HGNC: | 15472 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.57e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.82e-11 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.