FFCP PHASE1:Hg19::chr15:63340778..63340789,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7168|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12010|TSSclassifier=S|UniProt=|association_with_transcript=42bp_to_ENST00000558868_5end|description=CAGE_peak_12_at_TPM1_5end|id=chr15:63340778..63340789,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.35e-17!115;UBERON:0000477!7.07e-11!286;UBERON:0000468!3.28e-10!659;UBERON:0004111!5.62e-09!241;UBERON:0000481!3.44e-08!347;UBERON:0000922!1.15e-07!612;UBERON:0000467!2.28e-07!625;UBERON:0001049!2.39e-07!57;UBERON:0005068!2.39e-07!57;UBERON:0006241!2.39e-07!57;UBERON:0007135!2.39e-07!57;UBERON:0000480!3.51e-07!626;UBERON:0002619!6.21e-07!22|ontology_enrichment_uberon_v019=UBERON:0002619;5.67e-08;22|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.40e-13,114;UBERON:0002619,4.01e-08,22;UBERON:0001950,7.11e-07,20|phase1_expression=0.54503513781167,1.71280419112787,0.563817616383885,0,0.893922188854576,0.872338524100369,0,0.631719873426831,0.783556884599516,0.245733936501509,0,0.873765488520689,0.527533956456907,0.866364470720326,1.65698687863958,3.36162573225888,1.20538905604795,0,1.46379839637152,0.123121058076788,0.816002764977012,0,0.286235987131057,0.821246550437305,0.251085279189606,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0.309632246632152,0.919421224478927,0.6024118375565,0,0,0,0.293600439334847,0,0,0,0.223915474239924,0,0.257575567634187,0.436194716338694,0.755751887377619,0.727752183563449,0,0,0,0,0,0.236482229888585,0,0,1.35426486594342,0.188242339542605,0,0,0.612167784741805,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0.736555271975129,0,0,0.425208599930087,0,0.112328631146495,0,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0.534880391567015,0.144824403882799,7.31420598941885,1.34140171940727,0,0.361439152384566,0,1.15877215168659,0,0.486634870302636,0.378139268656271,0.665188192387692,0.614843499851882,0.589405839739707,0,0.370784442784429,0,0.174129737299267,0.398873881556595,0,0,0,0.198762407366705,1.72046919021225,1.04142150482278,1.13061588384802,0.419499436209906,0.825354125820202,0.835979866147242,0.516833518338658,0.35576626268671,0.33472061276467,0,1.52054421143703,0.732186172644509,0.367663080345869,0.81014194788176,1.42879565254528,1.34717623575702,0.563057402416611,3.06633274931766,1.89853131913626,0.183201743930407,0,0,0,0,0.886413581652058,0.132409180813219,0.286836620748814,1.06400514659507,0,0,0.49333509683432,0.311211035399766,1.0776853765575,1.63461903113459,0.605429710579726,1.15235184896,0,0.312160076830321,0.570471821544449,0.747243402759005,0.704606991862589,0.161872944368132,0.561803226808994,0.204154171254893,2.33385202892359,0.619954687054593,0,0.989067717114227,0,0,0.336672227908132,1.12606667884768,0,0.438977620880838,0.30648779579902,0.600952235626387,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0.721367704669072,0,0,0.506328996723799,0.292311015483596,0,0.184099797284599,1.77810662500693,0,0.10075209822764,0.847802961552438,0.57978255948989,0,0.286804595389004,1.21973706129595,1.45782745153634,0.929551542956147,1.7622379352613,1.00928340350251,0,1.56449532329816,0.643240938192885,0,1.39310378409594,2.88751792667834,1.18306800039844,2.19160097101532,1.20505514941741,1.54411561825352,1.30727666455444,0.474541238222193,1.21348177344148,1.76599318612811,2.69323009862473,0,0,0,0,5.07020139287323,0.982827216677626,4.13552934676983,0,0.491953754172454,0.171567810298526,0,0,0.603173834469785,0.370353780634118,0,0,0,0,0.117408694235822,1.87676382089396,2.31492756288305,4.37584550139576,0,0.858486162094873,0,0.234004265139238,0.891786973732369,0,0.335964256397719,0.283550194484773,0.626909658919938,1.45316969256981,0,0,0.088048434013226,0,0.144119953416961,0.12624243342638,0.126995788584338,0.381988425558278,0,0,0.822619941626588,0.600686115687835,0.285826432630578,0.112131084345361,1.74384027533312,0.7333828582095,0.387815147273333,0,0.845302752556,0.797814349754612,1.04007436911366,0.514414748524284,0,0.532844358032199,1.42977993658148,0.542621605391443,0,0.325736184293735,2.48774364119782,0,0.301439377059586,0,0.499864955910285,0,0,0,0.479249710983165,1.14861935834114,1.42636905040718,0.144781306667579,1.64381058040307,0,0,0,0,0.128343036279748,0.254094624222463,0,2.31986643833309,0.167516265334349,0,0,0,0,0.981531933753119,0,1.35632511849868,0.415941723061614,0.713715955188647,0,0.35142424497814,1.20378439891088,0,3.10419213877515,0,0,0.347534457872331,0.391602314925481,1.02943027143257,0,0,0.213455115606889,0.303127571446259,0,2.11673205330776,0,0.1534619732880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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7168 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12010 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=42bp_to_ENST00000558868_5end | |||
|description=CAGE_peak_12_at_TPM1_5end | |||
|id=chr15:63340778..63340789,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.35e-17!115;UBERON:0000477!7.07e-11!286;UBERON:0000468!3.28e-10!659;UBERON:0004111!5.62e-09!241;UBERON:0000481!3.44e-08!347;UBERON:0000922!1.15e-07!612;UBERON:0000467!2.28e-07!625;UBERON:0001049!2.39e-07!57;UBERON:0005068!2.39e-07!57;UBERON:0006241!2.39e-07!57;UBERON:0007135!2.39e-07!57;UBERON:0000480!3.51e-07!626;UBERON:0002619!6.21e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.67e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.40e-13,114;UBERON:0002619,4.01e-08,22;UBERON:0001950,7.11e-07,20 | |||
|phase1_expression=0.54503513781167,1.71280419112787,0.563817616383885,0,0.893922188854576,0.872338524100369,0,0.631719873426831,0.783556884599516,0.245733936501509,0,0.873765488520689,0.527533956456907,0.866364470720326,1.65698687863958,3.36162573225888,1.20538905604795,0,1.46379839637152,0.123121058076788,0.816002764977012,0,0.286235987131057,0.821246550437305,0.251085279189606,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0.309632246632152,0.919421224478927,0.6024118375565,0,0,0,0.293600439334847,0,0,0,0.223915474239924,0,0.257575567634187,0.436194716338694,0.755751887377619,0.727752183563449,0,0,0,0,0,0.236482229888585,0,0,1.35426486594342,0.188242339542605,0,0,0.612167784741805,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0.736555271975129,0,0,0.425208599930087,0,0.112328631146495,0,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0.534880391567015,0.144824403882799,7.31420598941885,1.34140171940727,0,0.361439152384566,0,1.15877215168659,0,0.486634870302636,0.378139268656271,0.665188192387692,0.614843499851882,0.589405839739707,0,0.370784442784429,0,0.174129737299267,0.398873881556595,0,0,0,0.198762407366705,1.72046919021225,1.04142150482278,1.13061588384802,0.419499436209906,0.825354125820202,0.835979866147242,0.516833518338658,0.35576626268671,0.33472061276467,0,1.52054421143703,0.732186172644509,0.367663080345869,0.81014194788176,1.42879565254528,1.34717623575702,0.563057402416611,3.06633274931766,1.89853131913626,0.183201743930407,0,0,0,0,0.886413581652058,0.132409180813219,0.286836620748814,1.06400514659507,0,0,0.49333509683432,0.311211035399766,1.0776853765575,1.63461903113459,0.605429710579726,1.15235184896,0,0.312160076830321,0.570471821544449,0.747243402759005,0.704606991862589,0.161872944368132,0.561803226808994,0.204154171254893,2.33385202892359,0.619954687054593,0,0.989067717114227,0,0,0.336672227908132,1.12606667884768,0,0.438977620880838,0.30648779579902,0.600952235626387,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0.721367704669072,0,0,0.506328996723799,0.292311015483596,0,0.184099797284599,1.77810662500693,0,0.10075209822764,0.847802961552438,0.57978255948989,0,0.286804595389004,1.21973706129595,1.45782745153634,0.929551542956147,1.7622379352613,1.00928340350251,0,1.56449532329816,0.643240938192885,0,1.39310378409594,2.88751792667834,1.18306800039844,2.19160097101532,1.20505514941741,1.54411561825352,1.30727666455444,0.474541238222193,1.21348177344148,1.76599318612811,2.69323009862473,0,0,0,0,5.07020139287323,0.982827216677626,4.13552934676983,0,0.491953754172454,0.171567810298526,0,0,0.603173834469785,0.370353780634118,0,0,0,0,0.117408694235822,1.87676382089396,2.31492756288305,4.37584550139576,0,0.858486162094873,0,0.234004265139238,0.891786973732369,0,0.335964256397719,0.283550194484773,0.626909658919938,1.45316969256981,0,0,0.088048434013226,0,0.144119953416961,0.12624243342638,0.126995788584338,0.381988425558278,0,0,0.822619941626588,0.600686115687835,0.285826432630578,0.112131084345361,1.74384027533312,0.7333828582095,0.387815147273333,0,0.845302752556,0.797814349754612,1.04007436911366,0.514414748524284,0,0.532844358032199,1.42977993658148,0.542621605391443,0,0.325736184293735,2.48774364119782,0,0.301439377059586,0,0.499864955910285,0,0,0,0.479249710983165,1.14861935834114,1.42636905040718,0.144781306667579,1.64381058040307,0,0,0,0,0.128343036279748,0.254094624222463,0,2.31986643833309,0.167516265334349,0,0,0,0,0.981531933753119,0,1.35632511849868,0.415941723061614,0.713715955188647,0,0.35142424497814,1.20378439891088,0,3.10419213877515,0,0,0.347534457872331,0.391602314925481,1.02943027143257,0,0,0.213455115606889,0.303127571446259,0,2.11673205330776,0,0.153461973288062,1.40330047216537,0.384417447767103,1.02341449813341,0.160853921143607,1.48418066444991,1.54209693802656,0.532685175939381,0.410635780069046,0,1.51073491997947,0.725156697549733,0.200506470303285,1.65745780084613,1.03333003348146,2.91345868810747,3.01586154406675,0,0.231046011313244,0,0,0.422206515571503,3.4120015221269,0.680374821106063,0.431831832204279,1.54227252690289,0.270946437543853,0,0,0.831076008928724,0,1.53481913652154,1.3071772551245,0,0,0,0.9273691048295,0.824125183365091,0,0,0.650060246036521,0,0.386682873168488,1.07834031980251,0.614014698904518,0.689182862422653,0.859361958946189,0.870100163485371,0.767039646744908,0.267096106940212,0.826424576804891,0.576570202095319,0.127612712494584,0.2023155617111,0,0.31481234683064,1.3940745403212,0,0,0.869932992075073,0,0.858749320451947,0.744316738719335,0.632758849437452,0.190630193923825,0,2.1396949401696,0,0,1.2591072030832,4.11805544604082,1.29593642580255,0,0,0,0,0,1.05650146756755,0.545999645631943,4.24216295861138,0,0,0,0.438450885253763,1.73632660280006,0,0,0.30982349809975,0.281695602532241,0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| |||
|short_description=p12@TPM1 | |||
}} |
Revision as of 07:45, 11 September 2013
Short description: | p12@TPM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_TPM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 42bp_to_ENST00000558868_5end |
EntrezGene: | TPM1 |
HGNC: | 12010 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.40e-13 | 114 |
regional part of cerebral cortex | 4.01e-08 | 22 |
neocortex | 7.11e-07 | 20 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.