FFCP PHASE1:Hg19::chr15:93485657..93485659,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1106|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=1917|TSSclassifier=N|UniProt=|association_with_transcript=-413bp_to_uc010bof.1_5end|description=CAGE_peak_16_at_CHD2_5end|id=chr15:93485657..93485659,+|ontology_enrichment_celltype=CL:0000738!2.03e-15!140;CL:0000037!9.68e-14!172;CL:0000566!9.68e-14!172;CL:0002032!2.39e-13!165;CL:0000837!2.39e-13!165;CL:0002087!4.15e-13!119;CL:0002031!1.20e-12!124;CL:0000988!3.89e-12!182;CL:0002057!3.35e-11!42;CL:0000860!3.18e-10!45;CL:0000766!1.25e-09!76;CL:0000763!1.45e-08!112;CL:0000049!1.45e-08!112;CL:0000839!4.71e-08!70;CL:0000557!7.85e-08!71;CL:0002009!1.05e-07!65;CL:0002194!1.26e-07!63;CL:0000576!1.26e-07!63;CL:0000040!1.26e-07!63;CL:0000559!1.26e-07!63|ontology_enrichment_celltype_v019=CL:0000860;2.69e-13;33!CL:0002057;2.69e-13;33!CL:0000473;8.81e-10;39!CL:0000234;8.81e-10;39!CL:0000576;9.55e-09;48|ontology_enrichment_celltype_v019_2=CL:0000738,5.28e-18,136;CL:0000860,3.65e-16,42;CL:0002057,3.65e-16,42;CL:0002031,1.65e-14,120;CL:0002087,2.74e-14,115;CL:0000766,5.36e-14,72;CL:0000037,5.50e-14,168;CL:0002032,7.75e-14,161;CL:0000837,7.75e-14,161;CL:0000473,1.30e-13,48;CL:0000234,1.30e-13,48;CL:0000988,8.01e-13,177;CL:0002009,4.52e-11,61;CL:0000557,6.48e-11,67;CL:0002194,4.56e-10,59;CL:0000576,4.56e-10,59;CL:0000040,4.56e-10,59;CL:0000559,4.56e-10,59;CL:0000839,9.86e-10,66;CL:0000763,1.21e-09,108;CL:0000049,1.21e-09,108|ontology_enrichment_development_v019=CL:0002057;1.99e-12;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4468;9.45e-07;2|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.38e-07!102;UBERON:0003061!7.38e-07!102|ontology_enrichment_uberon_v019=UBERON:0002133;2.87e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.37e-09,82;UBERON:0002371,4.13e-09,76;UBERON:0002390,6.38e-09,98;UBERON:0003061,6.38e-09,98;UBERON:0004765,5.54e-08,90;UBERON:0002193,1.23e-07,108;UBERON:0002133,4.95e-07,2;UBERON:0001434,9.48e-07,100|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,1.46062018077475,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0.229240217243854,0.0821005894499457,0.393553906568396,0.393364276848904,1.15148819429164,0.619264493264304,0,0,0.369754010166788,0.0774672005803016,0.710846162437108,0,1.10799081706375,1.20326668482085,1.30206522429511,0,0,0,0.872389432677388,0.377875943688809,0.727752183563449,1.62700325833979,0.822335776043652,1.23882548358041,1.43846196161075,1.2808035326455,0.236482229888585,1.37898272294647,0.645484683583826,0,1.31769637679823,0.545812300115692,0,1.53041946185451,0.962787081228281,1.27867425159808,0.989553900560148,1.39624560335142,0.852449501065388,2.32167390902867,1.70215567407342,1.24564449799115,2.00998932205395,3.65038042894141,0.434377689410233,0,0,0,0,0.212604299965044,0.209658645508376,0.22465726229299,0.450530678524519,0.16072558669708,0.855038231223746,0.39783335439818,0.182664153764634,0,0,1.77901850772711,1.70692089026603,0,0,0,0.954053754535364,1.1384259382189,1.17447437874188,0.764546456250458,0,0,0.263384084775077,1.57367816091066,2.75107533924415,4.31763147898969,0,0.651844533267181,1.4203434172042,0,0.111410456885174,0.589211814949674,0.443067789167242,0.270803863765016,0.768547918354051,0.260118695119756,0.986627427622057,0.276350017785848,0.289803085735052,1.03800594213442,0,1.04535523804977,0.566546713487831,0.383220493601921,0.34362744548263,0,0.318565414324097,0.651083453856419,0.950452044448374,0,0.127986611154418,0,0.236777252044017,0,0.80642697289893,1.87208137048455,2.46201486600758,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.43917392846563,0.130979075497713,0,0,0.649094787309367,0.870648686496336,0.398873881556595,0.953962497221368,0,0,0.596287222100115,0,0.347140501607594,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.337834441449967,0,0,0,0,7.75560528296651,0,0.496971951695318,0.25326102332916,0.397227542439656,0.286836620748814,0,0,0,0,0,0.538842688278752,0.163461903113459,0,0,0,0,0,0.149448680551801,0.23486899728753,0.323745888736263,0.280901613404497,0.408308342509787,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0.375355559615893,0,0.438977620880838,0.30648779579902,0,0,0,0.213557388818567,0.211931901159562,0,0.206105058476878,0.772921620136887,0.18611685633159,0.337552664482532,0,0.504867548488229,0,0,0.355009592516614,0,0,0.193260853163297,0,0,0.243947412259191,0.265059536642971,0.232387885739037,0.10366105501537,0.252320850875628,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0.468008530278475,0,0,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,0,0.088048434013226,1.03664057770386,0.576479813667846,0.75745460055828,0,0,0,0,0.10282749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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1106 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1917 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-413bp_to_uc010bof.1_5end | |||
|description=CAGE_peak_16_at_CHD2_5end | |||
|id=chr15:93485657..93485659,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.03e-15!140;CL:0000037!9.68e-14!172;CL:0000566!9.68e-14!172;CL:0002032!2.39e-13!165;CL:0000837!2.39e-13!165;CL:0002087!4.15e-13!119;CL:0002031!1.20e-12!124;CL:0000988!3.89e-12!182;CL:0002057!3.35e-11!42;CL:0000860!3.18e-10!45;CL:0000766!1.25e-09!76;CL:0000763!1.45e-08!112;CL:0000049!1.45e-08!112;CL:0000839!4.71e-08!70;CL:0000557!7.85e-08!71;CL:0002009!1.05e-07!65;CL:0002194!1.26e-07!63;CL:0000576!1.26e-07!63;CL:0000040!1.26e-07!63;CL:0000559!1.26e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.69e-13;33!CL:0002057;2.69e-13;33!CL:0000473;8.81e-10;39!CL:0000234;8.81e-10;39!CL:0000576;9.55e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.28e-18,136;CL:0000860,3.65e-16,42;CL:0002057,3.65e-16,42;CL:0002031,1.65e-14,120;CL:0002087,2.74e-14,115;CL:0000766,5.36e-14,72;CL:0000037,5.50e-14,168;CL:0002032,7.75e-14,161;CL:0000837,7.75e-14,161;CL:0000473,1.30e-13,48;CL:0000234,1.30e-13,48;CL:0000988,8.01e-13,177;CL:0002009,4.52e-11,61;CL:0000557,6.48e-11,67;CL:0002194,4.56e-10,59;CL:0000576,4.56e-10,59;CL:0000040,4.56e-10,59;CL:0000559,4.56e-10,59;CL:0000839,9.86e-10,66;CL:0000763,1.21e-09,108;CL:0000049,1.21e-09,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.99e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;9.45e-07;2 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.38e-07!102;UBERON:0003061!7.38e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;2.87e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.37e-09,82;UBERON:0002371,4.13e-09,76;UBERON:0002390,6.38e-09,98;UBERON:0003061,6.38e-09,98;UBERON:0004765,5.54e-08,90;UBERON:0002193,1.23e-07,108;UBERON:0002133,4.95e-07,2;UBERON:0001434,9.48e-07,100 | |||
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| |||
|short_description=p16@CHD2 | |||
}} |
Revision as of 09:00, 11 September 2013
Short description: | p16@CHD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_CHD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -413bp_to_uc010bof.1_5end |
EntrezGene: | CHD2 |
HGNC: | 1917 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.28e-18 | 136 |
classical monocyte | 3.65e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.65e-16 | 42 |
hematopoietic lineage restricted progenitor cell | 1.65e-14 | 120 |
nongranular leukocyte | 2.74e-14 | 115 |
myeloid leukocyte | 5.36e-14 | 72 |
hematopoietic stem cell | 5.50e-14 | 168 |
hematopoietic oligopotent progenitor cell | 7.75e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.75e-14 | 161 |
defensive cell | 1.30e-13 | 48 |
phagocyte | 1.30e-13 | 48 |
hematopoietic cell | 8.01e-13 | 177 |
macrophage dendritic cell progenitor | 4.52e-11 | 61 |
granulocyte monocyte progenitor cell | 6.48e-11 | 67 |
monopoietic cell | 4.56e-10 | 59 |
monocyte | 4.56e-10 | 59 |
monoblast | 4.56e-10 | 59 |
promonocyte | 4.56e-10 | 59 |
myeloid lineage restricted progenitor cell | 9.86e-10 | 66 |
myeloid cell | 1.21e-09 | 108 |
common myeloid progenitor | 1.21e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
bone element | 3.37e-09 | 82 |
bone marrow | 4.13e-09 | 76 |
hematopoietic system | 6.38e-09 | 98 |
blood island | 6.38e-09 | 98 |
skeletal element | 5.54e-08 | 90 |
hemolymphoid system | 1.23e-07 | 108 |
atrioventricular valve | 4.95e-07 | 2 |
skeletal system | 9.48e-07 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.