FFCP PHASE1:Hg19::chr17:25904469..25904479,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8844|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6465|TSSclassifier=S|UniProt=|association_with_transcript=-77bp_to_BC167812_5end|coexpression_cluster_id=C134|description=CAGE_peak_12_at_KSR1_5end|id=chr17:25904469..25904479,+|ontology_enrichment_celltype=CL:0002541!6.55e-07!3|ontology_enrichment_celltype_v019=CL:0002575;3.34e-11;2!CL:0000188;8.09e-10;9!CL:0002541;6.78e-08;3|ontology_enrichment_celltype_v019_2=CL:0002575,4.09e-11,2;CL:0000188,8.46e-10,9;CL:0002541,5.93e-08,3|ontology_enrichment_development_v019=UBERON:0008814;3.34e-11;2!UBERON:0010056;3.34e-11;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001630!3.32e-10!2;UBERON:0005090!3.32e-10!2;UBERON:0000341!3.63e-10!2;UBERON:0001723!3.97e-07!3;UBERON:0001033!3.97e-07!3;UBERON:0010056!3.97e-07!3;UBERON:0000476!6.55e-07!3;UBERON:0000920!6.55e-07!3;UBERON:0006947!8.76e-07!3;UBERON:0004054!8.76e-07!3|ontology_enrichment_uberon_v019=UBERON:0001134;3.24e-31;16!UBERON:0002036;3.24e-31;16!UBERON:0001723;3.56e-27;3!UBERON:0001033;3.56e-27;3!UBERON:0002426;5.16e-21;1!UBERON:0003831;5.16e-21;1!UBERON:0003898;5.16e-21;1!UBERON:0004830;5.16e-21;1!UBERON:0003830;5.16e-21;1!UBERON:0005175;5.16e-21;1!UBERON:0001774;5.16e-21;1!UBERON:0001103;5.16e-21;1!UBERON:0002385;3.39e-16;31!UBERON:0001015;3.39e-16;31!UBERON:0000383;3.39e-16;31!UBERON:0000341;3.34e-11;2!UBERON:0005090;3.34e-11;2!UBERON:0001630;3.34e-11;2!UBERON:0003124;6.78e-08;3!UBERON:0000920;6.78e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0001723,4.65e-27,3;UBERON:0001033,4.65e-27,3;UBERON:0010056,4.65e-27,3;UBERON:0002426,2.82e-21,1;UBERON:0003831,2.82e-21,1;UBERON:0003898,2.82e-21,1;UBERON:0004830,2.82e-21,1;UBERON:0003830,2.82e-21,1;UBERON:0005175,2.82e-21,1;UBERON:0001774,2.82e-21,1;UBERON:0001103,2.82e-21,1;UBERON:0010084,2.82e-21,1;UBERON:0005090,2.47e-11,2;UBERON:0001630,2.47e-11,2;UBERON:0000341,3.35e-11,2;UBERON:0001042,7.96e-09,10;UBERON:0009145,7.96e-09,10;UBERON:0001134,3.44e-08,62;UBERON:0002036,3.44e-08,62;UBERON:0003082,3.44e-08,62;UBERON:0006562,4.18e-08,11;UBERON:0000920,5.93e-08,3;UBERON:0002385,6.18e-08,64;UBERON:0001015,6.18e-08,64;UBERON:0000383,6.18e-08,64;UBERON:0002329,3.72e-07,71;UBERON:0003059,3.72e-07,71;UBERON:0007282,3.72e-07,71;UBERON:0004290,3.72e-07,71;UBERON:0009618,3.72e-07,71;UBERON:0003077,4.67e-07,72;UBERON:0007285,4.67e-07,72;UBERON:0007524,5.83e-07,73|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,1.06337790121334,0,0,0,0,0,0.170453254832202,2.8490251406956,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0,0.274792780205587,1.5991043280559,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,1.60515529459758,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,3.90118666053739,6.95888658802919,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760191006068622,0,0,0,0,0,0,0,0,1.0661699095049,0.714193294391221,0,0,0,0.0636471582781649,0.808468755832877,1.08858373948481,1.02669990325584,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0|short_description=p12@KSR1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8844 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6465 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-77bp_to_BC167812_5end | |||
|coexpression_cluster_id=C134 | |||
|description=CAGE_peak_12_at_KSR1_5end | |||
|id=chr17:25904469..25904479,+ | |||
|ontology_enrichment_celltype=CL:0002541!6.55e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002575;3.34e-11;2!CL:0000188;8.09e-10;9!CL:0002541;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,4.09e-11,2;CL:0000188,8.46e-10,9;CL:0002541,5.93e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008814;3.34e-11;2!UBERON:0010056;3.34e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001630!3.32e-10!2;UBERON:0005090!3.32e-10!2;UBERON:0000341!3.63e-10!2;UBERON:0001723!3.97e-07!3;UBERON:0001033!3.97e-07!3;UBERON:0010056!3.97e-07!3;UBERON:0000476!6.55e-07!3;UBERON:0000920!6.55e-07!3;UBERON:0006947!8.76e-07!3;UBERON:0004054!8.76e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.24e-31;16!UBERON:0002036;3.24e-31;16!UBERON:0001723;3.56e-27;3!UBERON:0001033;3.56e-27;3!UBERON:0002426;5.16e-21;1!UBERON:0003831;5.16e-21;1!UBERON:0003898;5.16e-21;1!UBERON:0004830;5.16e-21;1!UBERON:0003830;5.16e-21;1!UBERON:0005175;5.16e-21;1!UBERON:0001774;5.16e-21;1!UBERON:0001103;5.16e-21;1!UBERON:0002385;3.39e-16;31!UBERON:0001015;3.39e-16;31!UBERON:0000383;3.39e-16;31!UBERON:0000341;3.34e-11;2!UBERON:0005090;3.34e-11;2!UBERON:0001630;3.34e-11;2!UBERON:0003124;6.78e-08;3!UBERON:0000920;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,4.65e-27,3;UBERON:0001033,4.65e-27,3;UBERON:0010056,4.65e-27,3;UBERON:0002426,2.82e-21,1;UBERON:0003831,2.82e-21,1;UBERON:0003898,2.82e-21,1;UBERON:0004830,2.82e-21,1;UBERON:0003830,2.82e-21,1;UBERON:0005175,2.82e-21,1;UBERON:0001774,2.82e-21,1;UBERON:0001103,2.82e-21,1;UBERON:0010084,2.82e-21,1;UBERON:0005090,2.47e-11,2;UBERON:0001630,2.47e-11,2;UBERON:0000341,3.35e-11,2;UBERON:0001042,7.96e-09,10;UBERON:0009145,7.96e-09,10;UBERON:0001134,3.44e-08,62;UBERON:0002036,3.44e-08,62;UBERON:0003082,3.44e-08,62;UBERON:0006562,4.18e-08,11;UBERON:0000920,5.93e-08,3;UBERON:0002385,6.18e-08,64;UBERON:0001015,6.18e-08,64;UBERON:0000383,6.18e-08,64;UBERON:0002329,3.72e-07,71;UBERON:0003059,3.72e-07,71;UBERON:0007282,3.72e-07,71;UBERON:0004290,3.72e-07,71;UBERON:0009618,3.72e-07,71;UBERON:0003077,4.67e-07,72;UBERON:0007285,4.67e-07,72;UBERON:0007524,5.83e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,1.06337790121334,0,0,0,0,0,0.170453254832202,2.8490251406956,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0,0.274792780205587,1.5991043280559,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,1.60515529459758,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,3.90118666053739,6.95888658802919,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760191006068622,0,0,0,0,0,0,0,0,1.0661699095049,0.714193294391221,0,0,0,0.0636471582781649,0.808468755832877,1.08858373948481,1.02669990325584,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@KSR1 | |||
}} |
Revision as of 12:41, 11 September 2013
Short description: | p12@KSR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_KSR1_5end |
Coexpression cluster: | C134_skeletal_diaphragm_tongue_throat_Skeletal_skin_penis |
Association with transcript: | -77bp_to_BC167812_5end |
EntrezGene: | KSR1 |
HGNC: | 6465 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 4.09e-11 | 2 |
cell of skeletal muscle | 8.46e-10 | 9 |
chorionic membrane mesenchymal stem cell | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
tongue | 4.65e-27 | 3 |
gustatory system | 4.65e-27 | 3 |
future tongue | 4.65e-27 | 3 |
chest muscle | 2.82e-21 | 1 |
respiratory system muscle | 2.82e-21 | 1 |
skeletal muscle of trunk | 2.82e-21 | 1 |
respiratory system skeletal muscle | 2.82e-21 | 1 |
thoracic segment muscle | 2.82e-21 | 1 |
chest organ | 2.82e-21 | 1 |
muscle of trunk | 2.82e-21 | 1 |
diaphragm | 2.82e-21 | 1 |
future diaphragm | 2.82e-21 | 1 |
muscle structure | 2.47e-11 | 2 |
muscle organ | 2.47e-11 | 2 |
throat | 3.35e-11 | 2 |
chordate pharynx | 7.96e-09 | 10 |
pharyngeal region of foregut | 7.96e-09 | 10 |
skeletal muscle tissue | 3.44e-08 | 62 |
striated muscle tissue | 3.44e-08 | 62 |
myotome | 3.44e-08 | 62 |
pharynx | 4.18e-08 | 11 |
egg chorion | 5.93e-08 | 3 |
muscle tissue | 6.18e-08 | 64 |
musculature | 6.18e-08 | 64 |
musculature of body | 6.18e-08 | 64 |
somite | 3.72e-07 | 71 |
presomitic mesoderm | 3.72e-07 | 71 |
presumptive segmental plate | 3.72e-07 | 71 |
dermomyotome | 3.72e-07 | 71 |
trunk paraxial mesoderm | 3.72e-07 | 71 |
paraxial mesoderm | 4.67e-07 | 72 |
presumptive paraxial mesoderm | 4.67e-07 | 72 |
dense mesenchyme tissue | 5.83e-07 | 73 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.