FFCP PHASE1:Hg19::chr17:72462766..72462831,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11314|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19319|TSSclassifier=S|UniProt=Q9UGN4|association_with_transcript=0bp_to_ENST00000310828,ENST00000392625_5end|coexpression_cluster_id=C299|description=CAGE_peak_1_at_CD300A_5end|id=chr17:72462766..72462831,+|ontology_enrichment_celltype=CL:0000037!3.14e-61!172;CL:0000566!3.14e-61!172;CL:0002032!1.81e-56!165;CL:0000837!1.81e-56!165;CL:0000988!1.66e-54!182;CL:0000738!2.96e-52!140;CL:0000763!8.54e-52!112;CL:0000049!8.54e-52!112;CL:0000766!6.32e-45!76;CL:0002031!9.71e-43!124;CL:0000557!2.28e-40!71;CL:0002087!1.83e-39!119;CL:0000839!4.19e-39!70;CL:0002009!1.72e-36!65;CL:0002194!3.23e-35!63;CL:0000576!3.23e-35!63;CL:0000040!3.23e-35!63;CL:0000559!3.23e-35!63;CL:0002057!4.45e-34!42;CL:0000860!2.62e-30!45;CL:0002393!9.03e-09!9;CL:0002397!9.03e-09!9;CL:0000094!2.07e-07!8;CL:0000134!4.13e-07!358|ontology_enrichment_celltype_v019=CL:0000860;2.98e-26;33!CL:0002057;2.98e-26;33!CL:0000473;2.60e-25;39!CL:0000234;2.60e-25;39!CL:0000576;3.82e-25;48!CL:0000766;6.98e-23;69!CL:0000763;2.38e-17;100!CL:0002087;2.06e-12;104!CL:0000738;5.65e-12;136!CL:0000988;2.69e-10;177!CL:0000094;6.95e-08;8|ontology_enrichment_celltype_v019_2=CL:0000037,8.42e-62,168;CL:0002032,9.38e-57,161;CL:0000837,9.38e-57,161;CL:0000988,6.45e-56,177;CL:0000763,5.62e-55,108;CL:0000049,5.62e-55,108;CL:0000738,2.33e-54,136;CL:0000766,1.50e-53,72;CL:0000557,1.77e-48,67;CL:0002031,3.86e-47,120;CL:0000839,4.79e-47,66;CL:0002009,3.03e-44,61;CL:0002194,7.41e-43,59;CL:0000576,7.41e-43,59;CL:0000040,7.41e-43,59;CL:0000559,7.41e-43,59;CL:0002087,8.05e-43,115;CL:0000473,7.05e-41,48;CL:0000234,7.05e-41,48;CL:0000860,8.41e-37,42;CL:0002057,8.41e-37,42;CL:0002393,2.26e-09,9;CL:0002397,2.26e-09,9;CL:0000094,6.72e-08,8;CL:0000134,6.80e-08,354;CL:0002320,4.16e-07,361|ontology_enrichment_development_v019=CL:0002057;1.90e-26;42!CL:0000049;1.52e-15;108|ontology_enrichment_disease=DOID:8692!1.63e-07!31|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.27e-45!102;UBERON:0003061!9.27e-45!102;UBERON:0002193!1.15e-39!112;UBERON:0007023!8.01e-38!115;UBERON:0002371!1.00e-33!80;UBERON:0001474!3.19e-29!86;UBERON:0002405!6.67e-26!115;UBERON:0004765!3.67e-21!101;UBERON:0001434!3.67e-21!101;UBERON:0001049!8.25e-14!57;UBERON:0005068!8.25e-14!57;UBERON:0006241!8.25e-14!57;UBERON:0007135!8.25e-14!57;UBERON:0003080!6.58e-12!42;UBERON:0002780!1.58e-11!41;UBERON:0001890!1.58e-11!41;UBERON:0006240!1.58e-11!41;UBERON:0003081!2.06e-10!216;UBERON:0002616!3.17e-10!59;UBERON:0002020!1.91e-09!34;UBERON:0003528!1.91e-09!34;UBERON:0001893!3.63e-09!34;UBERON:0002791!5.26e-09!33;UBERON:0001869!2.84e-08!32;UBERON:0000955!4.56e-08!69;UBERON:0006238!4.56e-08!69;UBERON:0001017!1.02e-07!82;UBERON:0000178!1.66e-07!15;UBERON:0000179!1.66e-07!15;UBERON:0000463!1.66e-07!15;UBERON:0002619!2.18e-07!22;UBERON:0003075!2.94e-07!86;UBERON:0007284!2.94e-07!86;UBERON:0005743!3.59e-07!86|ontology_enrichment_uberon_v019=UBERON:0007023;1.68e-09;114!UBERON:0000178;3.48e-08;15!UBERON:0000179;3.48e-08;15!UBERON:0000463;3.48e-08;15!UBERON:0002780;5.05e-08;41!UBERON:0001890;5.05e-08;41!UBERON:0000073;3.48e-07;53!UBERON:0002616;3.48e-07;53!UBERON:0003528;4.38e-07;34!UBERON:0002020;4.38e-07;34!UBERON:0001893;4.79e-07;34!UBERON:0002791;6.66e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.35e-53,98;UBERON:0003061,4.35e-53,98;UBERON:0002193,2.07e-47,108;UBERON:0002371,8.05e-41,76;UBERON:0002405,1.32e-39,93;UBERON:0007023,6.78e-36,114;UBERON:0001474,1.12e-35,82;UBERON:0004765,5.92e-30,90;UBERON:0001434,3.35e-24,100;UBERON:0003081,1.46e-14,203;UBERON:0001049,5.55e-13,56;UBERON:0005068,5.55e-13,56;UBERON:0006241,5.55e-13,56;UBERON:0007135,5.55e-13,56;UBERON:0000073,1.30e-11,53;UBERON:0002616,1.30e-11,53;UBERON:0002780,1.14e-10,41;UBERON:0001890,1.14e-10,41;UBERON:0003080,1.14e-10,41;UBERON:0006240,1.14e-10,41;UBERON:0003528,1.78e-08,34;UBERON:0002020,1.78e-08,34;UBERON:0001893,3.33e-08,34;UBERON:0000178,3.47e-08,15;UBERON:0000179,3.47e-08,15;UBERON:0000463,3.47e-08,15;UBERON:0000955,1.05e-07,68;UBERON:0006238,1.05e-07,68;UBERON:0002791,1.16e-07,32;UBERON:0001017,1.39e-07,81;UBERON:0001869,2.71e-07,32;UBERON:0002204,3.57e-07,167;UBERON:0003075,5.25e-07,82;UBERON:0007284,5.25e-07,82|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,19.9438989002153,12.2329878280419,16.6866856385,61.7581914652779,10.747223146722,30.9632246632152,0,0,0,0,0,22.3136333894484,27.6997704265939,27.0735004084691,30.5985327709351,19.0328153103936,15.546895968911,17.5151385991247,75.170889449035,128.855696797884,162.288736934649,45.3236621966085,75.6548913960159,77.1168863528808,50.3461686563763,97.8533898941164,97.6671609439857,52.0565977912294,53.5752287374576,74.484567626888,61.5552450304317,104.250149322097,117.305658880334,52.0342617030534,77.6648245524147,90.1465347376648,72.8971373412643,117.28463068152,141.080392426322,23.5069483289153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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11314 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19319 | |||
|TSSclassifier=S | |||
|UniProt=Q9UGN4 | |||
|association_with_transcript=0bp_to_ENST00000310828,ENST00000392625_5end | |||
|coexpression_cluster_id=C299 | |||
|description=CAGE_peak_1_at_CD300A_5end | |||
|id=chr17:72462766..72462831,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.14e-61!172;CL:0000566!3.14e-61!172;CL:0002032!1.81e-56!165;CL:0000837!1.81e-56!165;CL:0000988!1.66e-54!182;CL:0000738!2.96e-52!140;CL:0000763!8.54e-52!112;CL:0000049!8.54e-52!112;CL:0000766!6.32e-45!76;CL:0002031!9.71e-43!124;CL:0000557!2.28e-40!71;CL:0002087!1.83e-39!119;CL:0000839!4.19e-39!70;CL:0002009!1.72e-36!65;CL:0002194!3.23e-35!63;CL:0000576!3.23e-35!63;CL:0000040!3.23e-35!63;CL:0000559!3.23e-35!63;CL:0002057!4.45e-34!42;CL:0000860!2.62e-30!45;CL:0002393!9.03e-09!9;CL:0002397!9.03e-09!9;CL:0000094!2.07e-07!8;CL:0000134!4.13e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.98e-26;33!CL:0002057;2.98e-26;33!CL:0000473;2.60e-25;39!CL:0000234;2.60e-25;39!CL:0000576;3.82e-25;48!CL:0000766;6.98e-23;69!CL:0000763;2.38e-17;100!CL:0002087;2.06e-12;104!CL:0000738;5.65e-12;136!CL:0000988;2.69e-10;177!CL:0000094;6.95e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.42e-62,168;CL:0002032,9.38e-57,161;CL:0000837,9.38e-57,161;CL:0000988,6.45e-56,177;CL:0000763,5.62e-55,108;CL:0000049,5.62e-55,108;CL:0000738,2.33e-54,136;CL:0000766,1.50e-53,72;CL:0000557,1.77e-48,67;CL:0002031,3.86e-47,120;CL:0000839,4.79e-47,66;CL:0002009,3.03e-44,61;CL:0002194,7.41e-43,59;CL:0000576,7.41e-43,59;CL:0000040,7.41e-43,59;CL:0000559,7.41e-43,59;CL:0002087,8.05e-43,115;CL:0000473,7.05e-41,48;CL:0000234,7.05e-41,48;CL:0000860,8.41e-37,42;CL:0002057,8.41e-37,42;CL:0002393,2.26e-09,9;CL:0002397,2.26e-09,9;CL:0000094,6.72e-08,8;CL:0000134,6.80e-08,354;CL:0002320,4.16e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.90e-26;42!CL:0000049;1.52e-15;108 | |||
|ontology_enrichment_disease=DOID:8692!1.63e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.27e-45!102;UBERON:0003061!9.27e-45!102;UBERON:0002193!1.15e-39!112;UBERON:0007023!8.01e-38!115;UBERON:0002371!1.00e-33!80;UBERON:0001474!3.19e-29!86;UBERON:0002405!6.67e-26!115;UBERON:0004765!3.67e-21!101;UBERON:0001434!3.67e-21!101;UBERON:0001049!8.25e-14!57;UBERON:0005068!8.25e-14!57;UBERON:0006241!8.25e-14!57;UBERON:0007135!8.25e-14!57;UBERON:0003080!6.58e-12!42;UBERON:0002780!1.58e-11!41;UBERON:0001890!1.58e-11!41;UBERON:0006240!1.58e-11!41;UBERON:0003081!2.06e-10!216;UBERON:0002616!3.17e-10!59;UBERON:0002020!1.91e-09!34;UBERON:0003528!1.91e-09!34;UBERON:0001893!3.63e-09!34;UBERON:0002791!5.26e-09!33;UBERON:0001869!2.84e-08!32;UBERON:0000955!4.56e-08!69;UBERON:0006238!4.56e-08!69;UBERON:0001017!1.02e-07!82;UBERON:0000178!1.66e-07!15;UBERON:0000179!1.66e-07!15;UBERON:0000463!1.66e-07!15;UBERON:0002619!2.18e-07!22;UBERON:0003075!2.94e-07!86;UBERON:0007284!2.94e-07!86;UBERON:0005743!3.59e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.68e-09;114!UBERON:0000178;3.48e-08;15!UBERON:0000179;3.48e-08;15!UBERON:0000463;3.48e-08;15!UBERON:0002780;5.05e-08;41!UBERON:0001890;5.05e-08;41!UBERON:0000073;3.48e-07;53!UBERON:0002616;3.48e-07;53!UBERON:0003528;4.38e-07;34!UBERON:0002020;4.38e-07;34!UBERON:0001893;4.79e-07;34!UBERON:0002791;6.66e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.35e-53,98;UBERON:0003061,4.35e-53,98;UBERON:0002193,2.07e-47,108;UBERON:0002371,8.05e-41,76;UBERON:0002405,1.32e-39,93;UBERON:0007023,6.78e-36,114;UBERON:0001474,1.12e-35,82;UBERON:0004765,5.92e-30,90;UBERON:0001434,3.35e-24,100;UBERON:0003081,1.46e-14,203;UBERON:0001049,5.55e-13,56;UBERON:0005068,5.55e-13,56;UBERON:0006241,5.55e-13,56;UBERON:0007135,5.55e-13,56;UBERON:0000073,1.30e-11,53;UBERON:0002616,1.30e-11,53;UBERON:0002780,1.14e-10,41;UBERON:0001890,1.14e-10,41;UBERON:0003080,1.14e-10,41;UBERON:0006240,1.14e-10,41;UBERON:0003528,1.78e-08,34;UBERON:0002020,1.78e-08,34;UBERON:0001893,3.33e-08,34;UBERON:0000178,3.47e-08,15;UBERON:0000179,3.47e-08,15;UBERON:0000463,3.47e-08,15;UBERON:0000955,1.05e-07,68;UBERON:0006238,1.05e-07,68;UBERON:0002791,1.16e-07,32;UBERON:0001017,1.39e-07,81;UBERON:0001869,2.71e-07,32;UBERON:0002204,3.57e-07,167;UBERON:0003075,5.25e-07,82;UBERON:0007284,5.25e-07,82 | |||
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| |||
|short_description=p1@CD300A | |||
}} |
Revision as of 15:30, 11 September 2013
Short description: | p1@CD300A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CD300A_5end |
Coexpression cluster: | C299_CD14CD16_Eosinophils_Neutrophils_CD14_Whole_Basophils_blood |
Association with transcript: | 0bp_to_ENST00000310828, ENST00000392625_5end |
EntrezGene: | CD300A |
HGNC: | 19319 |
UniProt: | Q9UGN4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.42e-62 | 168 |
hematopoietic oligopotent progenitor cell | 9.38e-57 | 161 |
hematopoietic multipotent progenitor cell | 9.38e-57 | 161 |
hematopoietic cell | 6.45e-56 | 177 |
myeloid cell | 5.62e-55 | 108 |
common myeloid progenitor | 5.62e-55 | 108 |
leukocyte | 2.33e-54 | 136 |
myeloid leukocyte | 1.50e-53 | 72 |
granulocyte monocyte progenitor cell | 1.77e-48 | 67 |
hematopoietic lineage restricted progenitor cell | 3.86e-47 | 120 |
myeloid lineage restricted progenitor cell | 4.79e-47 | 66 |
macrophage dendritic cell progenitor | 3.03e-44 | 61 |
monopoietic cell | 7.41e-43 | 59 |
monocyte | 7.41e-43 | 59 |
monoblast | 7.41e-43 | 59 |
promonocyte | 7.41e-43 | 59 |
nongranular leukocyte | 8.05e-43 | 115 |
defensive cell | 7.05e-41 | 48 |
phagocyte | 7.05e-41 | 48 |
classical monocyte | 8.41e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.41e-37 | 42 |
intermediate monocyte | 2.26e-09 | 9 |
CD14-positive, CD16-positive monocyte | 2.26e-09 | 9 |
granulocyte | 6.72e-08 | 8 |
mesenchymal cell | 6.80e-08 | 354 |
connective tissue cell | 4.16e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.35e-53 | 98 |
blood island | 4.35e-53 | 98 |
hemolymphoid system | 2.07e-47 | 108 |
bone marrow | 8.05e-41 | 76 |
immune system | 1.32e-39 | 93 |
adult organism | 6.78e-36 | 114 |
bone element | 1.12e-35 | 82 |
skeletal element | 5.92e-30 | 90 |
skeletal system | 3.35e-24 | 100 |
lateral plate mesoderm | 1.46e-14 | 203 |
neural tube | 5.55e-13 | 56 |
neural rod | 5.55e-13 | 56 |
future spinal cord | 5.55e-13 | 56 |
neural keel | 5.55e-13 | 56 |
regional part of nervous system | 1.30e-11 | 53 |
regional part of brain | 1.30e-11 | 53 |
regional part of forebrain | 1.14e-10 | 41 |
forebrain | 1.14e-10 | 41 |
anterior neural tube | 1.14e-10 | 41 |
future forebrain | 1.14e-10 | 41 |
brain grey matter | 1.78e-08 | 34 |
gray matter | 1.78e-08 | 34 |
telencephalon | 3.33e-08 | 34 |
blood | 3.47e-08 | 15 |
haemolymphatic fluid | 3.47e-08 | 15 |
organism substance | 3.47e-08 | 15 |
brain | 1.05e-07 | 68 |
future brain | 1.05e-07 | 68 |
regional part of telencephalon | 1.16e-07 | 32 |
central nervous system | 1.39e-07 | 81 |
cerebral hemisphere | 2.71e-07 | 32 |
musculoskeletal system | 3.57e-07 | 167 |
neural plate | 5.25e-07 | 82 |
presumptive neural plate | 5.25e-07 | 82 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.