FFCP PHASE1:Hg19::chr18:19749353..19749367,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2627|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4174|TSSclassifier=S|UniProt=Q92908|association_with_transcript=-36bp_to_ENST00000269216_5end|description=CAGE_peak_4_at_GATA6_5end|id=chr18:19749353..19749367,+|ontology_enrichment_celltype=CL:0000192!2.88e-08!42;CL:0000514!2.88e-08!42;CL:0000187!3.11e-08!54;CL:0002494!4.69e-08!16;CL:0000359!5.66e-08!32;CL:0000222!7.59e-08!119;CL:0000183!1.39e-07!59;CL:0000680!1.84e-07!57;CL:0000056!1.84e-07!57;CL:0000355!1.84e-07!57|ontology_enrichment_celltype_v019=CL:0000359;8.13e-12;32!CL:0002494;2.33e-08;16!CL:0000192;4.63e-07;43|ontology_enrichment_celltype_v019_2=CL:0000359,5.65e-13,32;CL:0000192,6.29e-10,43;CL:0000514,6.29e-10,43;CL:0000187,3.84e-09,55;CL:0002494,1.97e-08,16;CL:0000680,2.70e-08,58;CL:0000056,2.70e-08,58;CL:0000355,2.70e-08,58;CL:0000222,1.33e-07,121;CL:0000393,1.53e-07,61;CL:0000211,1.53e-07,61|ontology_enrichment_development_v019=CL:0000514;4.63e-07;43|ontology_enrichment_disease=DOID:2394!7.67e-07!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!1.80e-19!118;UBERON:0004872!4.64e-18!84;UBERON:0007100!1.55e-15!27;UBERON:0001009!1.50e-13!113;UBERON:0000948!1.86e-13!24;UBERON:0005498!1.86e-13!24;UBERON:0004140!1.86e-13!24;UBERON:0009881!1.86e-13!24;UBERON:0004141!1.86e-13!24;UBERON:0003084!1.86e-13!24;UBERON:0007005!1.86e-13!24;UBERON:0004139!1.86e-13!24;UBERON:0004291!1.86e-13!24;UBERON:0000490!3.04e-13!138;UBERON:0004535!3.84e-12!110;UBERON:0001981!1.12e-11!60;UBERON:0007500!1.12e-11!60;UBERON:0004537!1.12e-11!60;UBERON:0006965!1.12e-11!60;UBERON:0004458!3.78e-11!49;UBERON:0001048!5.23e-11!168;UBERON:0003104!2.66e-10!238;UBERON:0009142!2.66e-10!238;UBERON:0002323!2.87e-10!46;UBERON:0000055!4.70e-10!69;UBERON:0002049!1.71e-09!79;UBERON:0007798!1.71e-09!79;UBERON:0002100!2.36e-09!216;UBERON:0003103!3.09e-09!69;UBERON:0001637!3.10e-09!42;UBERON:0003509!3.10e-09!42;UBERON:0004572!3.10e-09!42;UBERON:0002385!9.76e-09!63;UBERON:0001015!9.76e-09!63;UBERON:0000383!9.76e-09!63;UBERON:0000926!1.82e-08!448;UBERON:0004120!1.82e-08!448;UBERON:0006603!1.82e-08!448;UBERON:0000481!2.48e-08!347;UBERON:0003886!3.04e-08!63;UBERON:0003929!4.94e-08!54;UBERON:0001134!6.65e-08!61;UBERON:0002036!6.65e-08!61;UBERON:0003082!6.65e-08!61;UBERON:0000483!7.59e-08!309;UBERON:0000119!8.41e-08!312;UBERON:0004921!1.43e-07!129;UBERON:0004185!1.43e-07!129;UBERON:0000466!1.46e-07!126;UBERON:0005256!2.69e-07!143;UBERON:0000477!2.80e-07!286;UBERON:0004111!2.90e-07!241;UBERON:0004119!3.69e-07!169;UBERON:0000925!3.69e-07!169;UBERON:0006595!3.69e-07!169;UBERON:0005156!5.35e-07!59;UBERON:0000990!5.35e-07!59;UBERON:0001007!6.99e-07!155;UBERON:0001555!6.99e-07!155;UBERON:0007026!6.99e-07!155;UBERON:0005409!7.29e-07!35;UBERON:0009569!9.26e-07!113|ontology_enrichment_uberon_v019=UBERON:0007100;1.19e-18;25!UBERON:0000948;3.28e-15;22!UBERON:0001637;6.15e-10;42!UBERON:0003509;6.15e-10;42!UBERON:0004572;6.15e-10;42!UBERON:0004573;6.41e-08;33!UBERON:0004571;6.41e-08;33!UBERON:0007500;1.89e-07;56!UBERON:0001981;1.89e-07;56!UBERON:0004537;1.89e-07;56!UBERON:0000160;6.18e-07;17!UBERON:0005409;6.50e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.41e-23,83;UBERON:0003914,2.67e-23,117;UBERON:0007100,7.46e-21,27;UBERON:0001009,2.37e-18,112;UBERON:0000948,2.58e-17,24;UBERON:0005498,2.58e-17,24;UBERON:0004140,2.58e-17,24;UBERON:0009881,2.58e-17,24;UBERON:0004141,2.58e-17,24;UBERON:0003084,2.58e-17,24;UBERON:0007005,2.58e-17,24;UBERON:0004139,2.58e-17,24;UBERON:0004291,2.58e-17,24;UBERON:0004535,4.47e-16,109;UBERON:0007500,1.94e-15,59;UBERON:0001981,1.94e-15,59;UBERON:0004537,1.94e-15,59;UBERON:0006965,1.94e-15,59;UBERON:0001637,1.84e-14,42;UBERON:0003509,1.84e-14,42;UBERON:0004572,1.84e-14,42;UBERON:0000055,2.80e-14,68;UBERON:0003104,7.48e-14,160;UBERON:0009142,7.48e-14,160;UBERON:0005256,2.39e-12,122;UBERON:0002049,5.42e-12,78;UBERON:0007798,5.42e-12,78;UBERON:0002100,7.15e-12,199;UBERON:0000490,2.84e-10,148;UBERON:0004797,4.17e-10,7;UBERON:0000025,4.32e-10,192;UBERON:0002385,4.50e-10,64;UBERON:0001015,4.50e-10,64;UBERON:0000383,4.50e-10,64;UBERON:0004111,1.26e-09,240;UBERON:0004573,2.80e-09,33;UBERON:0004571,2.80e-09,33;UBERON:0004458,4.35e-09,49;UBERON:0001134,8.09e-09,62;UBERON:0002036,8.09e-09,62;UBERON:0003082,8.09e-09,62;UBERON:0002323,1.83e-08,46;UBERON:0000926,1.95e-08,315;UBERON:0004120,1.95e-08,315;UBERON:0006603,1.95e-08,315;UBERON:0005409,3.27e-08,25;UBERON:0003886,9.65e-08,54;UBERON:0003103,1.52e-07,68;UBERON:0000483,1.61e-07,306;UBERON:0001048,1.75e-07,160;UBERON:0000119,2.91e-07,309;UBERON:0000160,5.48e-07,17;UBERON:0004457,8.18e-07,12;UBERON:0000042,8.18e-07,12;UBERON:0002329,9.19e-07,71;UBERON:0003059,9.19e-07,71;UBERON:0007282,9.19e-07,71;UBERON:0004290,9.19e-07,71;UBERON:0009618,9.19e-07,71;UBERON:0003929,9.46e-07,54|phase1_expression=1.2717486548939,0,1.83240725324762,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0.261185628199839,5.651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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2627 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4174 | |||
|TSSclassifier=S | |||
|UniProt=Q92908 | |||
|association_with_transcript=-36bp_to_ENST00000269216_5end | |||
|description=CAGE_peak_4_at_GATA6_5end | |||
|id=chr18:19749353..19749367,+ | |||
|ontology_enrichment_celltype=CL:0000192!2.88e-08!42;CL:0000514!2.88e-08!42;CL:0000187!3.11e-08!54;CL:0002494!4.69e-08!16;CL:0000359!5.66e-08!32;CL:0000222!7.59e-08!119;CL:0000183!1.39e-07!59;CL:0000680!1.84e-07!57;CL:0000056!1.84e-07!57;CL:0000355!1.84e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.13e-12;32!CL:0002494;2.33e-08;16!CL:0000192;4.63e-07;43 | |||
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|ontology_enrichment_disease=DOID:2394!7.67e-07!14 | |||
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| |||
|short_description=p4@GATA6 | |||
}} |
Revision as of 16:58, 11 September 2013
Short description: | p4@GATA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_GATA6_5end |
Coexpression cluster: | NA |
Association with transcript: | -36bp_to_ENST00000269216_5end |
EntrezGene: | GATA6 |
HGNC: | 4174 |
UniProt: | Q92908 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.65e-13 | 32 |
smooth muscle cell | 6.29e-10 | 43 |
smooth muscle myoblast | 6.29e-10 | 43 |
muscle cell | 3.84e-09 | 55 |
cardiocyte | 1.97e-08 | 16 |
muscle precursor cell | 2.70e-08 | 58 |
myoblast | 2.70e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.70e-08 | 58 |
mesodermal cell | 1.33e-07 | 121 |
electrically responsive cell | 1.53e-07 | 61 |
electrically active cell | 1.53e-07 | 61 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.