FFCP PHASE1:Hg19::chr19:19322805..19322812,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1463|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2465|TSSclassifier=S|UniProt=O14594,Q4LE67|association_with_transcript=23bp_to_ENST00000252575,ENST00000539499,NM_004386,uc002nlz.2_5end|coexpression_cluster_id=C561|description=CAGE_peak_2_at_NCAN_5end|id=chr19:19322805..19322812,+|ontology_enrichment_celltype=CL:0000047!2.53e-13!8;CL:0000540!4.17e-08!6;CL:0000031!4.17e-08!6;CL:0000404!4.17e-08!6;CL:0002319!3.38e-07!25|ontology_enrichment_celltype_v019=CL:0000047;4.25e-14;2!CL:0000540;9.09e-10;6!CL:0000404;9.09e-10;6!CL:0002319;8.85e-08;25!CL:0002553;2.57e-07;1|ontology_enrichment_celltype_v019_2=CL:0000047,1.74e-19,8;CL:0000540,9.54e-10,6;CL:0000031,9.54e-10,6;CL:0000404,9.54e-10,6;CL:0002319,9.56e-08,25;CL:0002553,1.72e-07,1|ontology_enrichment_development_v019=CL:0000031;9.09e-10;6!UBERON:0006601;9.14e-08;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.06e-84!82;UBERON:0005743!2.33e-83!86;UBERON:0000073!1.49e-77!94;UBERON:0001016!1.49e-77!94;UBERON:0001049!1.25e-76!57;UBERON:0005068!1.25e-76!57;UBERON:0006241!1.25e-76!57;UBERON:0007135!1.25e-76!57;UBERON:0000955!4.07e-64!69;UBERON:0006238!4.07e-64!69;UBERON:0002616!1.29e-62!59;UBERON:0001893!2.49e-62!34;UBERON:0002791!1.18e-59!33;UBERON:0002780!4.43e-58!41;UBERON:0001890!4.43e-58!41;UBERON:0006240!4.43e-58!41;UBERON:0001869!9.15e-58!32;UBERON:0002020!1.05e-57!34;UBERON:0003528!1.05e-57!34;UBERON:0003075!1.32e-57!86;UBERON:0007284!1.32e-57!86;UBERON:0002346!4.25e-57!90;UBERON:0003080!1.60e-56!42;UBERON:0002619!1.41e-51!22;UBERON:0000956!2.35e-49!25;UBERON:0000203!2.35e-49!25;UBERON:0001950!1.30e-46!20;UBERON:0003056!3.11e-44!61;UBERON:0000924!1.50e-41!173;UBERON:0006601!1.50e-41!173;UBERON:0004121!3.76e-41!169;UBERON:0000033!9.86e-37!123;UBERON:0000153!1.70e-34!129;UBERON:0007811!1.70e-34!129;UBERON:0007023!2.28e-34!115;UBERON:0003076!3.27e-20!15;UBERON:0003057!3.27e-20!15;UBERON:0000025!3.53e-19!194;UBERON:0001871!3.88e-17!7;UBERON:0000200!3.99e-17!6;UBERON:0001872!3.55e-15!5;UBERON:0002420!2.15e-14!9;UBERON:0007245!2.15e-14!9;UBERON:0010009!2.15e-14!9;UBERON:0010011!2.15e-14!9;UBERON:0000454!2.15e-14!9;UBERON:0000349!2.41e-14!5;UBERON:0004733!1.69e-13!12;UBERON:0002028!1.69e-13!12;UBERON:0007277!1.69e-13!12;UBERON:0004111!3.18e-13!241;UBERON:0004732!2.36e-12!13;UBERON:0000064!6.10e-12!219;UBERON:0002298!1.32e-11!8;UBERON:0000483!3.37e-11!309;UBERON:0000119!5.63e-11!312;UBERON:0002308!2.15e-10!9;UBERON:0000125!2.15e-10!9;UBERON:0000477!3.81e-10!286;UBERON:0002021!7.96e-10!5;UBERON:0009663!1.04e-09!7;UBERON:0002240!3.27e-09!3;UBERON:0002771!3.99e-09!3;UBERON:0000475!5.81e-09!365;UBERON:0001896!6.40e-09!3;UBERON:0005290!6.40e-09!3;UBERON:0010096!6.40e-09!3;UBERON:0002680!1.76e-07!9;UBERON:0001895!1.76e-07!9;UBERON:0010092!1.76e-07!9;UBERON:0001870!5.67e-07!2;UBERON:0000369!5.70e-07!4;UBERON:0002435!5.70e-07!4;UBERON:0000204!5.70e-07!4;UBERON:0010082!5.70e-07!4;UBERON:0001876!9.02e-07!2|ontology_enrichment_uberon_v019=UBERON:0002619;4.43e-42;22!UBERON:0001950;1.89e-39;20!UBERON:0000956;6.23e-37;25!UBERON:0000203;6.23e-37;25!UBERON:0001869;8.08e-35;32!UBERON:0001893;3.15e-31;34!UBERON:0002791;8.14e-30;32!UBERON:0003528;5.82e-28;34!UBERON:0002020;5.82e-28;34!UBERON:0002780;3.18e-23;41!UBERON:0001890;3.18e-23;41!UBERON:0001872;5.47e-20;5!UBERON:0001017;1.44e-18;75!UBERON:0001016;7.89e-17;83!UBERON:0000073;1.15e-16;53!UBERON:0002616;1.15e-16;53!UBERON:0000955;5.86e-14;68!UBERON:0002021;1.27e-11;5!UBERON:0000349;2.34e-11;5!UBERON:0001871;1.94e-08;6!UBERON:0002581;1.17e-07;1!UBERON:0002902;2.57e-07;1!UBERON:0001882;2.57e-07;1!UBERON:0002022;2.57e-07;1!UBERON:0003112;2.57e-07;1!UBERON:0011158;2.57e-07;1!UBERON:0009899;2.57e-07;1!UBERON:0007190;2.57e-07;1!UBERON:0003128;2.57e-07;1!UBERON:0005403;2.57e-07;1!UBERON:0001703;2.57e-07;1!UBERON:0002241;2.57e-07;1!UBERON:0011216;2.92e-07;132|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.69e-48,81;UBERON:0001016,9.95e-47,89;UBERON:0002619,3.30e-42,22;UBERON:0001950,1.70e-39,20;UBERON:0001869,2.32e-38,32;UBERON:0000956,4.80e-37,25;UBERON:0000203,4.80e-37,25;UBERON:0001893,5.40e-36,34;UBERON:0002791,2.60e-33,32;UBERON:0003528,3.02e-31,34;UBERON:0002020,3.02e-31,34;UBERON:0001049,9.82e-31,56;UBERON:0005068,9.82e-31,56;UBERON:0006241,9.82e-31,56;UBERON:0007135,9.82e-31,56;UBERON:0000955,1.36e-30,68;UBERON:0006238,1.36e-30,68;UBERON:0002780,1.74e-29,41;UBERON:0001890,1.74e-29,41;UBERON:0003080,1.74e-29,41;UBERON:0006240,1.74e-29,41;UBERON:0000073,7.08e-29,53;UBERON:0002616,7.08e-29,53;UBERON:0004121,4.15e-24,171;UBERON:0000924,4.15e-24,171;UBERON:0006601,4.15e-24,171;UBERON:0011216,2.09e-20,223;UBERON:0003075,6.20e-20,82;UBERON:0007284,6.20e-20,82;UBERON:0001872,6.53e-20,5;UBERON:0003056,5.53e-19,61;UBERON:0002346,7.60e-19,86;UBERON:0010371,7.24e-17,104;UBERON:0007023,2.89e-13,114;UBERON:0010314,1.67e-12,132;UBERON:0002021,1.44e-11,5;UBERON:0000349,2.57e-11,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1463 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2465 | |||
|TSSclassifier=S | |||
|UniProt=O14594,Q4LE67 | |||
|association_with_transcript=23bp_to_ENST00000252575,ENST00000539499,NM_004386,uc002nlz.2_5end | |||
|coexpression_cluster_id=C561 | |||
|description=CAGE_peak_2_at_NCAN_5end | |||
|id=chr19:19322805..19322812,+ | |||
|ontology_enrichment_celltype=CL:0000047!2.53e-13!8;CL:0000540!4.17e-08!6;CL:0000031!4.17e-08!6;CL:0000404!4.17e-08!6;CL:0002319!3.38e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000047;4.25e-14;2!CL:0000540;9.09e-10;6!CL:0000404;9.09e-10;6!CL:0002319;8.85e-08;25!CL:0002553;2.57e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.74e-19,8;CL:0000540,9.54e-10,6;CL:0000031,9.54e-10,6;CL:0000404,9.54e-10,6;CL:0002319,9.56e-08,25;CL:0002553,1.72e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000031;9.09e-10;6!UBERON:0006601;9.14e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.06e-84!82;UBERON:0005743!2.33e-83!86;UBERON:0000073!1.49e-77!94;UBERON:0001016!1.49e-77!94;UBERON:0001049!1.25e-76!57;UBERON:0005068!1.25e-76!57;UBERON:0006241!1.25e-76!57;UBERON:0007135!1.25e-76!57;UBERON:0000955!4.07e-64!69;UBERON:0006238!4.07e-64!69;UBERON:0002616!1.29e-62!59;UBERON:0001893!2.49e-62!34;UBERON:0002791!1.18e-59!33;UBERON:0002780!4.43e-58!41;UBERON:0001890!4.43e-58!41;UBERON:0006240!4.43e-58!41;UBERON:0001869!9.15e-58!32;UBERON:0002020!1.05e-57!34;UBERON:0003528!1.05e-57!34;UBERON:0003075!1.32e-57!86;UBERON:0007284!1.32e-57!86;UBERON:0002346!4.25e-57!90;UBERON:0003080!1.60e-56!42;UBERON:0002619!1.41e-51!22;UBERON:0000956!2.35e-49!25;UBERON:0000203!2.35e-49!25;UBERON:0001950!1.30e-46!20;UBERON:0003056!3.11e-44!61;UBERON:0000924!1.50e-41!173;UBERON:0006601!1.50e-41!173;UBERON:0004121!3.76e-41!169;UBERON:0000033!9.86e-37!123;UBERON:0000153!1.70e-34!129;UBERON:0007811!1.70e-34!129;UBERON:0007023!2.28e-34!115;UBERON:0003076!3.27e-20!15;UBERON:0003057!3.27e-20!15;UBERON:0000025!3.53e-19!194;UBERON:0001871!3.88e-17!7;UBERON:0000200!3.99e-17!6;UBERON:0001872!3.55e-15!5;UBERON:0002420!2.15e-14!9;UBERON:0007245!2.15e-14!9;UBERON:0010009!2.15e-14!9;UBERON:0010011!2.15e-14!9;UBERON:0000454!2.15e-14!9;UBERON:0000349!2.41e-14!5;UBERON:0004733!1.69e-13!12;UBERON:0002028!1.69e-13!12;UBERON:0007277!1.69e-13!12;UBERON:0004111!3.18e-13!241;UBERON:0004732!2.36e-12!13;UBERON:0000064!6.10e-12!219;UBERON:0002298!1.32e-11!8;UBERON:0000483!3.37e-11!309;UBERON:0000119!5.63e-11!312;UBERON:0002308!2.15e-10!9;UBERON:0000125!2.15e-10!9;UBERON:0000477!3.81e-10!286;UBERON:0002021!7.96e-10!5;UBERON:0009663!1.04e-09!7;UBERON:0002240!3.27e-09!3;UBERON:0002771!3.99e-09!3;UBERON:0000475!5.81e-09!365;UBERON:0001896!6.40e-09!3;UBERON:0005290!6.40e-09!3;UBERON:0010096!6.40e-09!3;UBERON:0002680!1.76e-07!9;UBERON:0001895!1.76e-07!9;UBERON:0010092!1.76e-07!9;UBERON:0001870!5.67e-07!2;UBERON:0000369!5.70e-07!4;UBERON:0002435!5.70e-07!4;UBERON:0000204!5.70e-07!4;UBERON:0010082!5.70e-07!4;UBERON:0001876!9.02e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.43e-42;22!UBERON:0001950;1.89e-39;20!UBERON:0000956;6.23e-37;25!UBERON:0000203;6.23e-37;25!UBERON:0001869;8.08e-35;32!UBERON:0001893;3.15e-31;34!UBERON:0002791;8.14e-30;32!UBERON:0003528;5.82e-28;34!UBERON:0002020;5.82e-28;34!UBERON:0002780;3.18e-23;41!UBERON:0001890;3.18e-23;41!UBERON:0001872;5.47e-20;5!UBERON:0001017;1.44e-18;75!UBERON:0001016;7.89e-17;83!UBERON:0000073;1.15e-16;53!UBERON:0002616;1.15e-16;53!UBERON:0000955;5.86e-14;68!UBERON:0002021;1.27e-11;5!UBERON:0000349;2.34e-11;5!UBERON:0001871;1.94e-08;6!UBERON:0002581;1.17e-07;1!UBERON:0002902;2.57e-07;1!UBERON:0001882;2.57e-07;1!UBERON:0002022;2.57e-07;1!UBERON:0003112;2.57e-07;1!UBERON:0011158;2.57e-07;1!UBERON:0009899;2.57e-07;1!UBERON:0007190;2.57e-07;1!UBERON:0003128;2.57e-07;1!UBERON:0005403;2.57e-07;1!UBERON:0001703;2.57e-07;1!UBERON:0002241;2.57e-07;1!UBERON:0011216;2.92e-07;132 | |||
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|short_description=p2@NCAN | |||
}} |
Revision as of 19:35, 11 September 2013
Short description: | p2@NCAN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_NCAN_5end |
Coexpression cluster: | C561_brain_Neural_spinal_Neurons_parietal_temporal_occipital |
Association with transcript: | 23bp_to_ENST00000252575, ENST00000539499, NM_004386, uc002nlz.2_5end |
EntrezGene: | NCAN |
HGNC: | 2465 |
UniProt: | O14594Q4LE67 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.74e-19 | 8 |
neuron | 9.54e-10 | 6 |
neuroblast | 9.54e-10 | 6 |
electrically signaling cell | 9.54e-10 | 6 |
neural cell | 9.56e-08 | 25 |
lung fibroblast | 1.72e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.