FFCP PHASE1:Hg19::chr1:150898812..150898923,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9869|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10761|TSSclassifier=S|UniProt=Q15047,B0QZE6,E9PQM8|association_with_transcript=0bp_to_ENST00000271640,ENST00000368962,ENST00000368963,ENST00000368969,ENST00000448029,ENST00000459773,ENST00000534805,NM_001145415,NM_001243491,NM_012432,uc001evu.2,uc001evv.2,uc001evw.3,uc009wmf.2_5end|description=CAGE_peak_1_at_SETDB1_5end|id=chr1:150898812..150898923,+|ontology_enrichment_celltype=CL:0000037!1.98e-16!172;CL:0000566!1.98e-16!172;CL:0002032!4.32e-15!165;CL:0000837!4.32e-15!165;CL:0000988!2.30e-14!182;CL:0000738!6.11e-12!140;CL:0000763!3.45e-10!112;CL:0000049!3.45e-10!112;CL:0002087!1.05e-09!119;CL:0002031!2.95e-09!124;CL:0000236!1.46e-07!14;CL:0000945!6.34e-07!24;CL:0000826!6.34e-07!24|ontology_enrichment_celltype_v019=CL:0000236;6.26e-08;13!CL:0000945;7.53e-07;24|ontology_enrichment_celltype_v019_2=CL:0000037,2.82e-16,168;CL:0002032,6.12e-15,161;CL:0000837,6.12e-15,161;CL:0000988,1.73e-14,177;CL:0000738,8.39e-12,136;CL:0000763,4.51e-10,108;CL:0000049,4.51e-10,108;CL:0002087,1.42e-09,115;CL:0002031,4.04e-09,120;CL:0000236,1.46e-07,14;CL:0000945,6.34e-07,24;CL:0000826,6.34e-07,24|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!6.16e-10!235;DOID:14566!3.50e-09!239;DOID:1240!8.48e-08!39;DOID:2531!2.85e-07!51;DOID:0060083!2.85e-07!51;DOID:8692!3.42e-07!31;DOID:3095!4.68e-07!22;DOID:2994!4.68e-07!22;DOID:0050687!9.45e-07!143|ontology_enrichment_disease_v019=DOID:3095;4.84e-07;22!DOID:2994;4.84e-07;22!DOID:8692;7.22e-07;31|ontology_enrichment_disease_v019_2=DOID:162,6.16e-10,235;DOID:14566,3.50e-09,239;DOID:1240,8.48e-08,39;DOID:2531,2.85e-07,51;DOID:0060083,2.85e-07,51;DOID:8692,3.42e-07,31;DOID:3095,4.68e-07,22;DOID:2994,4.68e-07,22;DOID:0050687,9.45e-07,143|ontology_enrichment_uberon=UBERON:0002390!6.91e-08!102;UBERON:0003061!6.91e-08!102;UBERON:0002193!7.48e-08!112|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.20e-08,98;UBERON:0003061,9.20e-08,98;UBERON:0002193,1.02e-07,108|phase1_expression=10.7190243769628,7.70761886007539,13.5316227932132,4.00293193412522,15.1966772105278,10.4680622892044,7.59899634504932,5.68547886084148,13.8428382945914,6.38908234903923,6.28021051175185,13.7618064442009,16.3535526501641,15.5945604729659,11.5989081504771,8.0679017574213,6.02694528023977,6.57279081348636,9.75865597581014,14.528284853061,11.4240387096782,12.8516435806016,21.4676990348293,11.2237028559765,10.5455817259634,21.2429267979305,16.5022184794391,14.5614945430307,18.8814852887474,18.8076405067634,11.7660253720218,11.0330546937471,9.93979531968225,11.4623743151704,25.8740449938207,22.7470771979874,29.6536443728196,17.1738576644882,11.6315779532682,11.0675544065084,23.5111247951921,20.0814072931767,24.4696789252477,30.388231904929,22.6725566213286,24.2584061187816,20.9186133215116,17.2690512969167,15.7950249156503,18.9876978932619,16.9066066309206,16.3172738623124,17.5820297175675,14.2006630388442,9.47985406160392,25.224473498709,22.6512104548012,19.7756666311674,14.6920268338033,12.8371610830437,21.0981251513684,23.4194423132568,21.3426113655146,21.3112375266347,12.1887880224005,13.0498601678962,18.6846674698673,22.1098825425934,17.7304192262868,14.7688414399479,12.1079900526674,15.4676607114777,15.1901945971625,26.6181660753047,34.4418965943371,28.3039171436307,29.6547586226747,32.4382088537654,36.0025314201459,31.9214272990198,34.0147518010444,23.7463399894024,38.719173781491,26.7607919518444,29.3538053774973,35.8453386955866,38.8384107424932,39.6579183568593,41.6458269854463,36.2540426723438,30.1682873628008,24.6639619535794,26.3768527406408,39.6513985737078,26.3439024601322,19.7538063581308,11.4091666666023,7.8602152549833,8.63526295797939,22.2358038869602,17.5998023982139,20.8317034523283,13.6378709885538,19.0511881273647,13.5518717438425,12.84896588585,13.2693893244858,14.986684407904,15.8672404023051,18.5814832202154,17.4100511205084,16.808578972633,19.1289666479058,23.276052043805,10.4535523804977,17.9028761462155,17.6281427056884,11.6833331464094,13.1570239850141,19.4324902737699,11.7195021694155,23.7613011112094,24.3931692905992,28.7969875097441,26.2354525759926,24.1512797084897,24.6338399076314,13.1044383096076,10.9650480271238,9.41358625238193,9.75227465255847,10.0605128955545,7.92747883429888,9.75885711438329,12.5334477658972,10.1392563272577,13.5198610998687,11.6792368872633,16.3545233693837,8.64744650103999,14.668409210752,31.0420408929579,8.01449634243593,6.67411997011973,16.2273696827342,14.975157407737,13.4287540124054,13.3554749610991,21.7358066096449,23.4018225837626,19.6774783293038,16.3444573070164,10.0670745466202,13.5673906061762,10.4874859052476,11.0047216776027,14.4206526910399,16.2802558276677,14.2306505074684,13.0541038978221,13.696196781711,15.2054421143703,15.864033740631,12.1328816514137,12.1521292182264,19.3780410376453,12.7981742396917,13.963823579932,7.66583187329416,9.49265659568129,12.2745168433373,10.54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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9869 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10761 | |||
|TSSclassifier=S | |||
|UniProt=Q15047,B0QZE6,E9PQM8 | |||
|association_with_transcript=0bp_to_ENST00000271640,ENST00000368962,ENST00000368963,ENST00000368969,ENST00000448029,ENST00000459773,ENST00000534805,NM_001145415,NM_001243491,NM_012432,uc001evu.2,uc001evv.2,uc001evw.3,uc009wmf.2_5end | |||
|description=CAGE_peak_1_at_SETDB1_5end | |||
|id=chr1:150898812..150898923,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.98e-16!172;CL:0000566!1.98e-16!172;CL:0002032!4.32e-15!165;CL:0000837!4.32e-15!165;CL:0000988!2.30e-14!182;CL:0000738!6.11e-12!140;CL:0000763!3.45e-10!112;CL:0000049!3.45e-10!112;CL:0002087!1.05e-09!119;CL:0002031!2.95e-09!124;CL:0000236!1.46e-07!14;CL:0000945!6.34e-07!24;CL:0000826!6.34e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;6.26e-08;13!CL:0000945;7.53e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.82e-16,168;CL:0002032,6.12e-15,161;CL:0000837,6.12e-15,161;CL:0000988,1.73e-14,177;CL:0000738,8.39e-12,136;CL:0000763,4.51e-10,108;CL:0000049,4.51e-10,108;CL:0002087,1.42e-09,115;CL:0002031,4.04e-09,120;CL:0000236,1.46e-07,14;CL:0000945,6.34e-07,24;CL:0000826,6.34e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.16e-10!235;DOID:14566!3.50e-09!239;DOID:1240!8.48e-08!39;DOID:2531!2.85e-07!51;DOID:0060083!2.85e-07!51;DOID:8692!3.42e-07!31;DOID:3095!4.68e-07!22;DOID:2994!4.68e-07!22;DOID:0050687!9.45e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.84e-07;22!DOID:2994;4.84e-07;22!DOID:8692;7.22e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.16e-10,235;DOID:14566,3.50e-09,239;DOID:1240,8.48e-08,39;DOID:2531,2.85e-07,51;DOID:0060083,2.85e-07,51;DOID:8692,3.42e-07,31;DOID:3095,4.68e-07,22;DOID:2994,4.68e-07,22;DOID:0050687,9.45e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.91e-08!102;UBERON:0003061!6.91e-08!102;UBERON:0002193!7.48e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.20e-08,98;UBERON:0003061,9.20e-08,98;UBERON:0002193,1.02e-07,108 | |||
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| |||
|short_description=p1@SETDB1 | |||
}} |
Revision as of 00:17, 12 September 2013
Short description: | p1@SETDB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SETDB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000271640, ENST00000368962, ENST00000368963, ENST00000368969, ENST00000448029, ENST00000459773, ENST00000534805, NM_001145415, NM_001243491, NM_012432, uc001evu.2, uc001evv.2, uc001evw.3, uc009wmf.2_5end |
EntrezGene: | SETDB1 |
HGNC: | 10761 |
UniProt: | Q15047B0QZE6E9PQM8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.82e-16 | 168 |
hematopoietic oligopotent progenitor cell | 6.12e-15 | 161 |
hematopoietic multipotent progenitor cell | 6.12e-15 | 161 |
hematopoietic cell | 1.73e-14 | 177 |
leukocyte | 8.39e-12 | 136 |
myeloid cell | 4.51e-10 | 108 |
common myeloid progenitor | 4.51e-10 | 108 |
nongranular leukocyte | 1.42e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 4.04e-09 | 120 |
B cell | 1.46e-07 | 14 |
lymphocyte of B lineage | 6.34e-07 | 24 |
pro-B cell | 6.34e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.20e-08 | 98 |
blood island | 9.20e-08 | 98 |
hemolymphoid system | 1.02e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.16e-10 | 235 |
disease of cellular proliferation | 3.50e-09 | 239 |
leukemia | 8.48e-08 | 39 |
hematologic cancer | 2.85e-07 | 51 |
immune system cancer | 2.85e-07 | 51 |
myeloid leukemia | 3.42e-07 | 31 |
germ cell and embryonal cancer | 4.68e-07 | 22 |
germ cell cancer | 4.68e-07 | 22 |
cell type cancer | 9.45e-07 | 143 |
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