FFCP PHASE1:Hg19::chr1:205326089..205326108,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55220|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25573|TSSclassifier=S|UniProt=Q8IYD2|association_with_transcript=-50bp_to_ENST00000367155,NM_018203,uc001hcf.1,uc010prg.1_5end|coexpression_cluster_id=C337|description=CAGE_peak_7_at_KLHDC8A_5end|id=chr1:205326089..205326108,-|ontology_enrichment_celltype=CL:0000511!1.27e-07!1;CL:0002625!1.27e-07!1;CL:0000216!1.27e-07!1;CL:0002319!1.58e-07!25;CL:0000047!1.61e-07!8|ontology_enrichment_celltype_v019=CL:0000511;8.64e-26;1!CL:0002625;8.64e-26;1!CL:0000216;8.64e-26;1!CL:0000047;8.82e-14;2|ontology_enrichment_celltype_v019_2=CL:0000511,5.93e-26,1;CL:0002625,5.93e-26,1;CL:0000216,5.93e-26,1|ontology_enrichment_development_v019=UBERON:0006238;5.17e-10;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!2.61e-20!86;UBERON:0000073!2.71e-20!94;UBERON:0001016!2.71e-20!94;UBERON:0001017!4.69e-19!82;UBERON:0000955!2.13e-13!69;UBERON:0006238!2.13e-13!69;UBERON:0007023!1.40e-12!115;UBERON:0001049!3.33e-12!57;UBERON:0005068!3.33e-12!57;UBERON:0006241!3.33e-12!57;UBERON:0007135!3.33e-12!57;UBERON:0004121!3.69e-12!169;UBERON:0000924!8.87e-12!173;UBERON:0006601!8.87e-12!173;UBERON:0000033!4.31e-10!123;UBERON:0002616!8.93e-10!59;UBERON:0000153!1.80e-09!129;UBERON:0007811!1.80e-09!129;UBERON:0003076!1.91e-09!15;UBERON:0003057!1.91e-09!15;UBERON:0003135!7.44e-09!11;UBERON:0003075!8.28e-09!86;UBERON:0007284!8.28e-09!86;UBERON:0001896!1.39e-08!3;UBERON:0005290!1.39e-08!3;UBERON:0010096!1.39e-08!3;UBERON:0002346!2.59e-08!90;UBERON:0004733!7.42e-08!12;UBERON:0002028!7.42e-08!12;UBERON:0007277!7.42e-08!12;UBERON:0002791!1.02e-07!33;UBERON:0001136!1.27e-07!1;UBERON:0001343!1.27e-07!1;UBERON:0004910!1.27e-07!1;UBERON:0005154!1.27e-07!1;UBERON:0005295!1.27e-07!1;UBERON:0004813!1.27e-07!1;UBERON:0005297!1.27e-07!1;UBERON:0005294!1.27e-07!1;UBERON:0010141!1.27e-07!1;UBERON:0005891!1.27e-07!1;UBERON:0001893!1.80e-07!34;UBERON:0002020!1.82e-07!34;UBERON:0003528!1.82e-07!34;UBERON:0001736!2.09e-07!1;UBERON:0006298!2.09e-07!1;UBERON:0000473!2.61e-07!8;UBERON:0004732!2.93e-07!13;UBERON:0001301!4.08e-07!1;UBERON:0002336!5.50e-07!1;UBERON:0001018!5.50e-07!1;UBERON:0002473!5.50e-07!1;UBERON:0005340!5.50e-07!1;UBERON:0002316!5.50e-07!1;UBERON:0003544!5.50e-07!1;UBERON:0001020!5.50e-07!1;UBERON:0005970!5.50e-07!1;UBERON:0002437!5.50e-07!1;UBERON:0002298!6.00e-07!8;UBERON:0005904!6.03e-07!4|ontology_enrichment_uberon_v019=UBERON:0001136;8.64e-26;1!UBERON:0001343;8.64e-26;1!UBERON:0004910;8.64e-26;1!UBERON:0004813;8.64e-26;1!UBERON:0004909;1.29e-13;2!UBERON:0005904;1.86e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001136,5.93e-26,1;UBERON:0001343,5.93e-26,1;UBERON:0004910,5.93e-26,1;UBERON:0005154,5.93e-26,1;UBERON:0005295,5.93e-26,1;UBERON:0004813,5.93e-26,1;UBERON:0005297,5.93e-26,1;UBERON:0005294,5.93e-26,1;UBERON:0010141,5.93e-26,1;UBERON:0005891,5.93e-26,1;UBERON:0004909,1.07e-13,2;UBERON:0005904,1.69e-07,4;UBERON:0001016,5.81e-07,89|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7950408664471,0,0.773288812777695,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,3.99227596002388,0,0,0,0,0,0,0.344743373241465,0,0,0,0.241192877250816,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.124192805882767,1.10678907948985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29389773676018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7727886584389,0,0,0,0,0,0,0,0,0,0,12.7105454910245,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55220 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25573 | |||
|TSSclassifier=S | |||
|UniProt=Q8IYD2 | |||
|association_with_transcript=-50bp_to_ENST00000367155,NM_018203,uc001hcf.1,uc010prg.1_5end | |||
|coexpression_cluster_id=C337 | |||
|description=CAGE_peak_7_at_KLHDC8A_5end | |||
|id=chr1:205326089..205326108,- | |||
|ontology_enrichment_celltype=CL:0000511!1.27e-07!1;CL:0002625!1.27e-07!1;CL:0000216!1.27e-07!1;CL:0002319!1.58e-07!25;CL:0000047!1.61e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000511;8.64e-26;1!CL:0002625;8.64e-26;1!CL:0000216;8.64e-26;1!CL:0000047;8.82e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,5.93e-26,1;CL:0002625,5.93e-26,1;CL:0000216,5.93e-26,1 | |||
|ontology_enrichment_development_v019=UBERON:0006238;5.17e-10;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.61e-20!86;UBERON:0000073!2.71e-20!94;UBERON:0001016!2.71e-20!94;UBERON:0001017!4.69e-19!82;UBERON:0000955!2.13e-13!69;UBERON:0006238!2.13e-13!69;UBERON:0007023!1.40e-12!115;UBERON:0001049!3.33e-12!57;UBERON:0005068!3.33e-12!57;UBERON:0006241!3.33e-12!57;UBERON:0007135!3.33e-12!57;UBERON:0004121!3.69e-12!169;UBERON:0000924!8.87e-12!173;UBERON:0006601!8.87e-12!173;UBERON:0000033!4.31e-10!123;UBERON:0002616!8.93e-10!59;UBERON:0000153!1.80e-09!129;UBERON:0007811!1.80e-09!129;UBERON:0003076!1.91e-09!15;UBERON:0003057!1.91e-09!15;UBERON:0003135!7.44e-09!11;UBERON:0003075!8.28e-09!86;UBERON:0007284!8.28e-09!86;UBERON:0001896!1.39e-08!3;UBERON:0005290!1.39e-08!3;UBERON:0010096!1.39e-08!3;UBERON:0002346!2.59e-08!90;UBERON:0004733!7.42e-08!12;UBERON:0002028!7.42e-08!12;UBERON:0007277!7.42e-08!12;UBERON:0002791!1.02e-07!33;UBERON:0001136!1.27e-07!1;UBERON:0001343!1.27e-07!1;UBERON:0004910!1.27e-07!1;UBERON:0005154!1.27e-07!1;UBERON:0005295!1.27e-07!1;UBERON:0004813!1.27e-07!1;UBERON:0005297!1.27e-07!1;UBERON:0005294!1.27e-07!1;UBERON:0010141!1.27e-07!1;UBERON:0005891!1.27e-07!1;UBERON:0001893!1.80e-07!34;UBERON:0002020!1.82e-07!34;UBERON:0003528!1.82e-07!34;UBERON:0001736!2.09e-07!1;UBERON:0006298!2.09e-07!1;UBERON:0000473!2.61e-07!8;UBERON:0004732!2.93e-07!13;UBERON:0001301!4.08e-07!1;UBERON:0002336!5.50e-07!1;UBERON:0001018!5.50e-07!1;UBERON:0002473!5.50e-07!1;UBERON:0005340!5.50e-07!1;UBERON:0002316!5.50e-07!1;UBERON:0003544!5.50e-07!1;UBERON:0001020!5.50e-07!1;UBERON:0005970!5.50e-07!1;UBERON:0002437!5.50e-07!1;UBERON:0002298!6.00e-07!8;UBERON:0005904!6.03e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;8.64e-26;1!UBERON:0001343;8.64e-26;1!UBERON:0004910;8.64e-26;1!UBERON:0004813;8.64e-26;1!UBERON:0004909;1.29e-13;2!UBERON:0005904;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,5.93e-26,1;UBERON:0001343,5.93e-26,1;UBERON:0004910,5.93e-26,1;UBERON:0005154,5.93e-26,1;UBERON:0005295,5.93e-26,1;UBERON:0004813,5.93e-26,1;UBERON:0005297,5.93e-26,1;UBERON:0005294,5.93e-26,1;UBERON:0010141,5.93e-26,1;UBERON:0005891,5.93e-26,1;UBERON:0004909,1.07e-13,2;UBERON:0005904,1.69e-07,4;UBERON:0001016,5.81e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7950408664471,0,0.773288812777695,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,3.99227596002388,0,0,0,0,0,0,0.344743373241465,0,0,0,0.241192877250816,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.124192805882767,1.10678907948985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29389773676018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7727886584389,0,0,0,0,0,0,0,0,0,0,12.7105454910245,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.357382720883282,0,1.04617282831313,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@KLHDC8A | |||
}} |
Revision as of 03:04, 12 September 2013
Short description: | p7@KLHDC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_KLHDC8A_5end |
Coexpression cluster: | C337_ovary_testis_Adipocyte_mesothelioma_chorionic_placenta_spleen |
Association with transcript: | -50bp_to_ENST00000367155, NM_018203, uc001hcf.1, uc010prg.1_5end |
EntrezGene: | KLHDC8A |
HGNC: | 25573 |
UniProt: | Q8IYD2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 5.93e-26 | 1 |
seminiferous tubule epithelial cell | 5.93e-26 | 1 |
Sertoli cell | 5.93e-26 | 1 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 5.93e-26 | 1 |
seminiferous tubule of testis | 5.93e-26 | 1 |
epithelium of male gonad | 5.93e-26 | 1 |
epithelial cord | 5.93e-26 | 1 |
sex cord | 5.93e-26 | 1 |
seminiferous tubule epithelium | 5.93e-26 | 1 |
testis sex cord | 5.93e-26 | 1 |
genital ridge | 5.93e-26 | 1 |
primitive sex cord of indifferent gonad | 5.93e-26 | 1 |
coelomic epithelium | 5.93e-26 | 1 |
epithelium of gonad | 1.07e-13 | 2 |
duct of male reproductive system | 1.69e-07 | 4 |
nervous system | 5.81e-07 | 89 |
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