FFCP PHASE1:Hg19::chr1:29241108..29241121,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2035|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3377|TSSclassifier=S|UniProt=P11171,Q4VB86|association_with_transcript=17bp_to_ENST00000373797,uc001brk.2,uc001brl.1,uc009vtk.1_5end|coexpression_cluster_id=C3965|description=CAGE_peak_5_at_EPB41_5end|id=chr1:29241108..29241121,+|ontology_enrichment_celltype=CL:0000542!1.02e-16!53;CL:0000051!1.02e-16!53;CL:0000838!3.50e-16!52;CL:0000791!1.91e-14!18;CL:0000789!1.91e-14!18;CL:0002420!1.91e-14!18;CL:0002419!1.91e-14!18;CL:0000790!1.91e-14!18;CL:0000037!5.39e-13!172;CL:0000566!5.39e-13!172;CL:0000988!1.38e-12!182;CL:0000084!2.82e-12!25;CL:0000827!2.82e-12!25;CL:0002032!3.05e-11!165;CL:0000837!3.05e-11!165;CL:0000625!1.40e-09!11;CL:0000738!1.41e-08!140;CL:0002087!6.08e-08!119|ontology_enrichment_celltype_v019=CL:0000791;3.76e-29;18!CL:0000789;3.76e-29;18!CL:0002419;3.76e-29;18!CL:0000084;7.85e-22;25!CL:0000625;1.82e-17;11!CL:0000624;4.94e-12;6!CL:0000542;8.31e-11;53!CL:0000898;5.64e-07;3|ontology_enrichment_celltype_v019_2=CL:0000791,5.92e-29,18;CL:0000789,5.92e-29,18;CL:0002420,5.92e-29,18;CL:0002419,5.92e-29,18;CL:0000790,5.92e-29,18;CL:0000084,9.33e-22,25;CL:0000827,9.33e-22,25;CL:0000542,3.62e-19,53;CL:0000051,3.62e-19,53;CL:0000838,3.77e-18,52;CL:0000625,1.90e-17,11;CL:0000624,5.29e-12,6;CL:0000037,8.44e-09,168;CL:0000988,7.64e-08,177;CL:0002032,4.81e-07,161;CL:0000837,4.81e-07,161;CL:0000738,6.17e-07,136;CL:0000898,6.58e-07,3;CL:0002087,7.56e-07,115|ontology_enrichment_development_v019=CL:0000790;3.76e-29;18!CL:0000051;8.31e-11;53!UBERON:0006215;2.11e-07;3|ontology_enrichment_disease=DOID:2531!1.13e-07!51;DOID:0060083!1.13e-07!51;DOID:1240!4.13e-07!39|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!2.00e-08!15;UBERON:0000179!2.00e-08!15;UBERON:0000463!2.00e-08!15|ontology_enrichment_uberon_v019=UBERON:0000178;2.22e-07;15!UBERON:0000179;2.22e-07;15!UBERON:0000463;2.22e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.74e-08,4;UBERON:0005058,3.74e-08,4;UBERON:0009113,3.74e-08,4;UBERON:0003295,3.74e-08,4;UBERON:0005562,3.74e-08,4;UBERON:0000178,1.70e-07,15;UBERON:0000179,1.70e-07,15;UBERON:0000463,1.70e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.410623275218653,0.251085279189606,0.229240217243854,0.656804715599566,0.236132343941038,0.786728553697808,1.91914699048606,0.464448369948228,0,0,0,0.46480320348181,0,0.293600439334847,0.553995408531877,0.401088894940283,0.651032612147555,0.223915474239924,0.647787332037959,0,0,0.377875943688809,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0,0,0,0.22465726229299,0,0.32145117339416,0,0,0,0,1.63841583378639,1.77901850772711,0.853460445133014,0,1.14950487990897,1.98313461835459,0,1.70763890732835,0.587237189370939,0.764546456250458,0,0,0.263384084775077,2.9506465517075,2.35806457649499,4.5232329779892,3.67810289859492,2.93330039970231,3.78758244587787,3.89653456815823,2.89667187901451,5.00830042707223,5.53834736459053,7.85331204918545,3.71464827204458,3.90178042679635,3.12432018746985,3.31620021343018,2.60822777161547,4.44859689486181,2.94294910898684,2.09071047609954,3.39928028092699,3.06576394881537,2.74901956386104,2.53019692019503,4.45991580053735,3.25541726928209,0.950452044448374,5.11955404864427,2.94369205655162,8.74515085866421,3.78843603270427,4.92676798152628,1.61285394579786,3.20928234940209,3.18613688542158,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0.174129737299267,0,0.476981248610684,0,0.371457501329565,0,0,0,0.56530794192401,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0.355009592516614,0,0,0,0,0,0.853815942907168,0.397589304964456,0.813357600086629,0.518305275076852,0.756962552626885,0.72995471815166,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,2.20731549707325,0,0,0,0,0,0,0.325808305310325,1.03993478527958,0,0.115930404975077,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00876629594175,2.56139988262505,2.80315847317372,3.59360501583295,0,0,0,0,0,0.749007023947182,2.99161459204025,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51505644408909,1.94142780736755,3.52200940751366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0,1.28197250745681,1.07262349896764,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2035 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3377 | |||
|TSSclassifier=S | |||
|UniProt=P11171,Q4VB86 | |||
|association_with_transcript=17bp_to_ENST00000373797,uc001brk.2,uc001brl.1,uc009vtk.1_5end | |||
|coexpression_cluster_id=C3965 | |||
|description=CAGE_peak_5_at_EPB41_5end | |||
|id=chr1:29241108..29241121,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.02e-16!53;CL:0000051!1.02e-16!53;CL:0000838!3.50e-16!52;CL:0000791!1.91e-14!18;CL:0000789!1.91e-14!18;CL:0002420!1.91e-14!18;CL:0002419!1.91e-14!18;CL:0000790!1.91e-14!18;CL:0000037!5.39e-13!172;CL:0000566!5.39e-13!172;CL:0000988!1.38e-12!182;CL:0000084!2.82e-12!25;CL:0000827!2.82e-12!25;CL:0002032!3.05e-11!165;CL:0000837!3.05e-11!165;CL:0000625!1.40e-09!11;CL:0000738!1.41e-08!140;CL:0002087!6.08e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.76e-29;18!CL:0000789;3.76e-29;18!CL:0002419;3.76e-29;18!CL:0000084;7.85e-22;25!CL:0000625;1.82e-17;11!CL:0000624;4.94e-12;6!CL:0000542;8.31e-11;53!CL:0000898;5.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.92e-29,18;CL:0000789,5.92e-29,18;CL:0002420,5.92e-29,18;CL:0002419,5.92e-29,18;CL:0000790,5.92e-29,18;CL:0000084,9.33e-22,25;CL:0000827,9.33e-22,25;CL:0000542,3.62e-19,53;CL:0000051,3.62e-19,53;CL:0000838,3.77e-18,52;CL:0000625,1.90e-17,11;CL:0000624,5.29e-12,6;CL:0000037,8.44e-09,168;CL:0000988,7.64e-08,177;CL:0002032,4.81e-07,161;CL:0000837,4.81e-07,161;CL:0000738,6.17e-07,136;CL:0000898,6.58e-07,3;CL:0002087,7.56e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;3.76e-29;18!CL:0000051;8.31e-11;53!UBERON:0006215;2.11e-07;3 | |||
|ontology_enrichment_disease=DOID:2531!1.13e-07!51;DOID:0060083!1.13e-07!51;DOID:1240!4.13e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.00e-08!15;UBERON:0000179!2.00e-08!15;UBERON:0000463!2.00e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.22e-07;15!UBERON:0000179;2.22e-07;15!UBERON:0000463;2.22e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.74e-08,4;UBERON:0005058,3.74e-08,4;UBERON:0009113,3.74e-08,4;UBERON:0003295,3.74e-08,4;UBERON:0005562,3.74e-08,4;UBERON:0000178,1.70e-07,15;UBERON:0000179,1.70e-07,15;UBERON:0000463,1.70e-07,15 | |||
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| |||
|short_description=p5@EPB41 | |||
}} |
Revision as of 05:09, 12 September 2013
Short description: | p5@EPB41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_EPB41_5end |
Coexpression cluster: | C3965_cerebellum_CD4_pineal_small_merkel_Neutrophils_CD8 |
Association with transcript: | 17bp_to_ENST00000373797, uc001brk.2, uc001brl.1, uc009vtk.1_5end |
EntrezGene: | EPB41 |
HGNC: | 3377 |
UniProt: | P11171Q4VB86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.92e-29 | 18 |
alpha-beta T cell | 5.92e-29 | 18 |
immature T cell | 5.92e-29 | 18 |
mature T cell | 5.92e-29 | 18 |
immature alpha-beta T cell | 5.92e-29 | 18 |
T cell | 9.33e-22 | 25 |
pro-T cell | 9.33e-22 | 25 |
lymphocyte | 3.62e-19 | 53 |
common lymphoid progenitor | 3.62e-19 | 53 |
lymphoid lineage restricted progenitor cell | 3.77e-18 | 52 |
CD8-positive, alpha-beta T cell | 1.90e-17 | 11 |
CD4-positive, alpha-beta T cell | 5.29e-12 | 6 |
hematopoietic stem cell | 8.44e-09 | 168 |
hematopoietic cell | 7.64e-08 | 177 |
hematopoietic oligopotent progenitor cell | 4.81e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.81e-07 | 161 |
leukocyte | 6.17e-07 | 136 |
naive T cell | 6.58e-07 | 3 |
nongranular leukocyte | 7.56e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.74e-08 | 4 |
hemolymphoid system gland | 3.74e-08 | 4 |
thymic region | 3.74e-08 | 4 |
pharyngeal gland | 3.74e-08 | 4 |
thymus primordium | 3.74e-08 | 4 |
blood | 1.70e-07 | 15 |
haemolymphatic fluid | 1.70e-07 | 15 |
organism substance | 1.70e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.