FFCP PHASE1:Hg19::chr20:1448319..1448351,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55968|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15912|TSSclassifier=S|UniProt=Q9UNZ2,Q53FE8|association_with_transcript=0bp_to_ENST00000216879,NM_001206736,NM_016143,NM_018839,NR_038164_5end|coexpression_cluster_id=C1812|description=CAGE_peak_3_at_NSFL1C_5end|id=chr20:1448319..1448351,-|ontology_enrichment_celltype=CL:0000763!1.14e-46!112;CL:0000049!1.14e-46!112;CL:0000037!3.64e-39!172;CL:0000566!3.64e-39!172;CL:0002032!1.38e-36!165;CL:0000837!1.38e-36!165;CL:0000988!6.63e-35!182;CL:0000766!1.05e-26!76;CL:0000557!1.46e-23!71;CL:0000738!7.14e-23!140;CL:0000839!4.15e-22!70;CL:0002009!3.50e-20!65;CL:0002194!7.75e-19!63;CL:0000576!7.75e-19!63;CL:0000040!7.75e-19!63;CL:0000559!7.75e-19!63;CL:0002031!5.48e-17!124;CL:0002087!1.52e-13!119;CL:0002057!4.59e-12!42;CL:0000860!1.28e-10!45;CL:0000451!2.73e-08!10;CL:0000094!2.58e-07!8|ontology_enrichment_celltype_v019=CL:0000094;1.66e-16;8!CL:0000763;4.97e-14;100!CL:0000081;1.15e-11;11!CL:0000767;4.85e-09;3!CL:0000236;1.66e-08;13!CL:0000771;8.30e-07;2!CL:0000766;8.73e-07;69|ontology_enrichment_celltype_v019_2=CL:0000763,1.16e-36,108;CL:0000049,1.16e-36,108;CL:0000037,7.51e-33,168;CL:0000988,1.82e-30,177;CL:0002032,3.56e-30,161;CL:0000837,3.56e-30,161;CL:0000766,9.38e-17,72;CL:0000094,1.76e-16,8;CL:0000738,1.82e-14,136;CL:0000081,1.19e-11,11;CL:0000557,9.13e-11,67;CL:0000767,4.94e-09,3;CL:0000839,1.34e-08,66;CL:0000134,1.69e-08,354;CL:0002320,4.32e-08,361;CL:0000236,5.05e-08,14;CL:0002031,5.35e-08,120;CL:0002009,4.42e-07,61;CL:0000771,7.45e-07,2|ontology_enrichment_development_v019=CL:0000049;4.45e-11;108|ontology_enrichment_disease=DOID:8692!9.42e-18!31;DOID:1240!4.34e-12!39;DOID:2531!9.08e-08!51;DOID:0060083!9.08e-08!51|ontology_enrichment_disease_v019=DOID:8692;9.69e-25;31!DOID:1240;2.08e-16;39!DOID:2531;7.59e-10;51!DOID:0060083;7.59e-10;51|ontology_enrichment_disease_v019_2=DOID:8692,3.94e-26,31;DOID:1240,1.11e-19,39;DOID:2531,7.63e-14,51;DOID:0060083,7.63e-14,51|ontology_enrichment_uberon=UBERON:0002390!9.27e-27!102;UBERON:0003061!9.27e-27!102;UBERON:0002193!4.43e-24!112;UBERON:0002371!3.98e-20!80;UBERON:0007023!4.97e-19!115;UBERON:0002405!7.30e-18!115;UBERON:0001474!1.89e-17!86;UBERON:0004765!2.59e-12!101;UBERON:0001434!2.59e-12!101;UBERON:0003081!2.87e-07!216;UBERON:0000178!2.99e-07!15;UBERON:0000179!2.99e-07!15;UBERON:0000463!2.99e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;5.70e-16;15!UBERON:0000179;5.70e-16;15!UBERON:0000463;5.70e-16;15!UBERON:0002390;5.79e-09;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.35e-18,98;UBERON:0003061,8.35e-18,98;UBERON:0000178,8.14e-16,15;UBERON:0000179,8.14e-16,15;UBERON:0000463,8.14e-16,15;UBERON:0002193,2.15e-15,108;UBERON:0002371,4.22e-10,76;UBERON:0001474,5.47e-09,82;UBERON:0004765,9.55e-08,90;UBERON:0002384,1.54e-07,371;UBERON:0002405,2.44e-07,93|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5876568591649,2.30297638858328,3.56077083626975,0,0,0,0,0,19.3776289960999,0,0.200544447470142,1.30206522429511,1.34349284543955,0.647787332037959,2.06060454107349,2.03557534291391,0,0.727752183563449,0.232429036905685,0,0.309706370895104,0,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0.752969358170419,0.545812300115692,0.224723484445085,0.612167784741805,0,1.27867425159808,1.31940520074686,0.797854630486527,0.426224750532694,0.290209238628584,0,0.622822248995575,0.251248665256743,1.0429658368404,0.434377689410233,0,0,0,0.633765858935825,0.212604299965044,0.838634582033504,1.79725809834392,1.35159203557356,0.964353520182481,1.42506371870624,0.39783335439818,1.0959849225878,0,2.73069305631066,1.77901850772711,3.41384178053206,2.80277190925209,0,1.32208974556972,0.954053754535364,1.70763890732835,1.76171156811282,0.764546456250458,11.8954195721123,1.68152568894461,12.1156678996535,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0.649094787309367,0.522389211897802,0.398873881556595,1.43094374583205,2.85997455390064,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,3.9534125230819,34.9002237733493,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.702012795417713,0.445893486866185,0,0,0,0,0,0,0,0.264145302039678,20.940139669618,46.9831048139294,21.2087288156318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,8.98808428736619,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0,0.784349769176855,1.461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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55968 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15912 | |||
|TSSclassifier=S | |||
|UniProt=Q9UNZ2,Q53FE8 | |||
|association_with_transcript=0bp_to_ENST00000216879,NM_001206736,NM_016143,NM_018839,NR_038164_5end | |||
|coexpression_cluster_id=C1812 | |||
|description=CAGE_peak_3_at_NSFL1C_5end | |||
|id=chr20:1448319..1448351,- | |||
|ontology_enrichment_celltype=CL:0000763!1.14e-46!112;CL:0000049!1.14e-46!112;CL:0000037!3.64e-39!172;CL:0000566!3.64e-39!172;CL:0002032!1.38e-36!165;CL:0000837!1.38e-36!165;CL:0000988!6.63e-35!182;CL:0000766!1.05e-26!76;CL:0000557!1.46e-23!71;CL:0000738!7.14e-23!140;CL:0000839!4.15e-22!70;CL:0002009!3.50e-20!65;CL:0002194!7.75e-19!63;CL:0000576!7.75e-19!63;CL:0000040!7.75e-19!63;CL:0000559!7.75e-19!63;CL:0002031!5.48e-17!124;CL:0002087!1.52e-13!119;CL:0002057!4.59e-12!42;CL:0000860!1.28e-10!45;CL:0000451!2.73e-08!10;CL:0000094!2.58e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.66e-16;8!CL:0000763;4.97e-14;100!CL:0000081;1.15e-11;11!CL:0000767;4.85e-09;3!CL:0000236;1.66e-08;13!CL:0000771;8.30e-07;2!CL:0000766;8.73e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.16e-36,108;CL:0000049,1.16e-36,108;CL:0000037,7.51e-33,168;CL:0000988,1.82e-30,177;CL:0002032,3.56e-30,161;CL:0000837,3.56e-30,161;CL:0000766,9.38e-17,72;CL:0000094,1.76e-16,8;CL:0000738,1.82e-14,136;CL:0000081,1.19e-11,11;CL:0000557,9.13e-11,67;CL:0000767,4.94e-09,3;CL:0000839,1.34e-08,66;CL:0000134,1.69e-08,354;CL:0002320,4.32e-08,361;CL:0000236,5.05e-08,14;CL:0002031,5.35e-08,120;CL:0002009,4.42e-07,61;CL:0000771,7.45e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000049;4.45e-11;108 | |||
|ontology_enrichment_disease=DOID:8692!9.42e-18!31;DOID:1240!4.34e-12!39;DOID:2531!9.08e-08!51;DOID:0060083!9.08e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.69e-25;31!DOID:1240;2.08e-16;39!DOID:2531;7.59e-10;51!DOID:0060083;7.59e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.94e-26,31;DOID:1240,1.11e-19,39;DOID:2531,7.63e-14,51;DOID:0060083,7.63e-14,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.27e-27!102;UBERON:0003061!9.27e-27!102;UBERON:0002193!4.43e-24!112;UBERON:0002371!3.98e-20!80;UBERON:0007023!4.97e-19!115;UBERON:0002405!7.30e-18!115;UBERON:0001474!1.89e-17!86;UBERON:0004765!2.59e-12!101;UBERON:0001434!2.59e-12!101;UBERON:0003081!2.87e-07!216;UBERON:0000178!2.99e-07!15;UBERON:0000179!2.99e-07!15;UBERON:0000463!2.99e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.70e-16;15!UBERON:0000179;5.70e-16;15!UBERON:0000463;5.70e-16;15!UBERON:0002390;5.79e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.35e-18,98;UBERON:0003061,8.35e-18,98;UBERON:0000178,8.14e-16,15;UBERON:0000179,8.14e-16,15;UBERON:0000463,8.14e-16,15;UBERON:0002193,2.15e-15,108;UBERON:0002371,4.22e-10,76;UBERON:0001474,5.47e-09,82;UBERON:0004765,9.55e-08,90;UBERON:0002384,1.54e-07,371;UBERON:0002405,2.44e-07,93 | |||
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| |||
|short_description=p3@NSFL1C | |||
}} |
Revision as of 07:32, 12 September 2013
Short description: | p3@NSFL1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_NSFL1C_5end |
Coexpression cluster: | C1812_Mast_granulocyte_acute_Eosinophils_chronic_Basophils_CD133 |
Association with transcript: | 0bp_to_ENST00000216879, NM_001206736, NM_016143, NM_018839, NR_038164_5end |
EntrezGene: | NSFL1C |
HGNC: | 15912 |
UniProt: | Q9UNZ2Q53FE8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.16e-36 | 108 |
common myeloid progenitor | 1.16e-36 | 108 |
hematopoietic stem cell | 7.51e-33 | 168 |
hematopoietic cell | 1.82e-30 | 177 |
hematopoietic oligopotent progenitor cell | 3.56e-30 | 161 |
hematopoietic multipotent progenitor cell | 3.56e-30 | 161 |
myeloid leukocyte | 9.38e-17 | 72 |
granulocyte | 1.76e-16 | 8 |
leukocyte | 1.82e-14 | 136 |
blood cell | 1.19e-11 | 11 |
granulocyte monocyte progenitor cell | 9.13e-11 | 67 |
basophil | 4.94e-09 | 3 |
myeloid lineage restricted progenitor cell | 1.34e-08 | 66 |
mesenchymal cell | 1.69e-08 | 354 |
connective tissue cell | 4.32e-08 | 361 |
B cell | 5.05e-08 | 14 |
hematopoietic lineage restricted progenitor cell | 5.35e-08 | 120 |
macrophage dendritic cell progenitor | 4.42e-07 | 61 |
eosinophil | 7.45e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.35e-18 | 98 |
blood island | 8.35e-18 | 98 |
blood | 8.14e-16 | 15 |
haemolymphatic fluid | 8.14e-16 | 15 |
organism substance | 8.14e-16 | 15 |
hemolymphoid system | 2.15e-15 | 108 |
bone marrow | 4.22e-10 | 76 |
bone element | 5.47e-09 | 82 |
skeletal element | 9.55e-08 | 90 |
connective tissue | 1.54e-07 | 371 |
immune system | 2.44e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.94e-26 | 31 |
leukemia | 1.11e-19 | 39 |
hematologic cancer | 7.63e-14 | 51 |
immune system cancer | 7.63e-14 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.