FFCP PHASE1:Mm9::chr10:101630272..101630276,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:101630272..101630276,+|id=chr10:101630272..101630276,+|ontology_enrichment_celltype=CL:0000117!5.67e-10!23;CL:0000337!5.67e-10!23;CL:0002612!1.33e-07!3;CL:0000540!2.72e-07!33;CL:0000047!2.72e-07!33;CL:0000031!2.72e-07!33;CL:0000404!2.72e-07!33;CL:0002614!3.89e-07!3|ontology_enrichment_celltype_v019_2=CL:0002612,1.65e-52,3;CL:0000117,7.48e-13,23;CL:0000337,7.48e-13,23;CL:0000540,3.70e-09,33;CL:0000047,3.70e-09,33;CL:0000031,3.70e-09,33;CL:0000404,3.70e-09,33;CL:0000393,7.68e-08,39;CL:0000211,7.68e-08,39;CL:0002614,3.18e-07,3;CL:0002319,3.65e-07,43;CL:0000221,5.16e-07,44;CL:0000133,5.16e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.26e-19!71;UBERON:0003075!4.26e-19!71;UBERON:0007284!4.26e-19!71;UBERON:0004121!4.38e-15!102;UBERON:0000924!4.38e-15!102;UBERON:0006601!4.38e-15!102;UBERON:0003056!4.75e-15!49;UBERON:0000033!3.53e-14!63;UBERON:0002020!1.14e-13!34;UBERON:0001049!2.06e-13!52;UBERON:0005068!2.06e-13!52;UBERON:0006241!2.06e-13!52;UBERON:0007135!2.06e-13!52;UBERON:0000955!3.07e-12!50;UBERON:0006238!3.07e-12!50;UBERON:0001017!4.07e-12!73;UBERON:0005743!4.07e-12!73;UBERON:0003080!1.01e-11!40;UBERON:0000073!1.29e-11!75;UBERON:0001016!1.29e-11!75;UBERON:0002616!4.15e-11!49;UBERON:0002780!9.17e-11!39;UBERON:0001890!9.17e-11!39;UBERON:0006240!9.17e-11!39;UBERON:0002791!1.36e-10!29;UBERON:0003528!1.36e-10!29;UBERON:0001893!1.36e-10!29;UBERON:0000153!4.01e-09!94;UBERON:0007811!1.17e-08!86;UBERON:0002950!1.97e-08!4;UBERON:0001891!1.97e-08!4;UBERON:0009616!1.97e-08!4;UBERON:0002298!2.86e-08!6;UBERON:0002257!1.33e-07!3;UBERON:0002021!3.02e-07!10;UBERON:0000411!3.02e-07!10;UBERON:0001950!3.02e-07!10;UBERON:0002038!3.89e-07!3;UBERON:0002308!3.89e-07!3;UBERON:0009663!3.89e-07!3;UBERON:0009661!3.89e-07!3;UBERON:0006331!3.89e-07!3;UBERON:0000125!3.89e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0002257,1.65e-52,3;UBERON:0001948,5.98e-32,5;UBERON:0002315,5.98e-32,5;UBERON:0002240,8.48e-27,6;UBERON:0005174,8.48e-27,6;UBERON:0001137,8.48e-27,6;UBERON:0003076,7.25e-14,12;UBERON:0003057,7.25e-14,12;UBERON:0002020,6.61e-09,34;UBERON:0000489,2.89e-08,21;UBERON:0002038,3.18e-07,3;UBERON:0009663,3.18e-07,3;UBERON:0009661,3.18e-07,3;UBERON:0000125,3.18e-07,3;UBERON:0002308,3.18e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0,0.395658863190582,0.274462930807229,0,0.279182999001381,0.56276261003168,2.29197371665215,1.76777151284201,1.28134512719193,1.67759501242771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0,0,0,0.150722640552623,0.352766121407114,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15212002503146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.343706364687375,0,0.755393897389701,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0|short_description=p@chr10:101630272..101630276,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:101630272..101630276,+ | |||
|id=chr10:101630272..101630276,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.67e-10!23;CL:0000337!5.67e-10!23;CL:0002612!1.33e-07!3;CL:0000540!2.72e-07!33;CL:0000047!2.72e-07!33;CL:0000031!2.72e-07!33;CL:0000404!2.72e-07!33;CL:0002614!3.89e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.65e-52,3;CL:0000117,7.48e-13,23;CL:0000337,7.48e-13,23;CL:0000540,3.70e-09,33;CL:0000047,3.70e-09,33;CL:0000031,3.70e-09,33;CL:0000404,3.70e-09,33;CL:0000393,7.68e-08,39;CL:0000211,7.68e-08,39;CL:0002614,3.18e-07,3;CL:0002319,3.65e-07,43;CL:0000221,5.16e-07,44;CL:0000133,5.16e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.26e-19!71;UBERON:0003075!4.26e-19!71;UBERON:0007284!4.26e-19!71;UBERON:0004121!4.38e-15!102;UBERON:0000924!4.38e-15!102;UBERON:0006601!4.38e-15!102;UBERON:0003056!4.75e-15!49;UBERON:0000033!3.53e-14!63;UBERON:0002020!1.14e-13!34;UBERON:0001049!2.06e-13!52;UBERON:0005068!2.06e-13!52;UBERON:0006241!2.06e-13!52;UBERON:0007135!2.06e-13!52;UBERON:0000955!3.07e-12!50;UBERON:0006238!3.07e-12!50;UBERON:0001017!4.07e-12!73;UBERON:0005743!4.07e-12!73;UBERON:0003080!1.01e-11!40;UBERON:0000073!1.29e-11!75;UBERON:0001016!1.29e-11!75;UBERON:0002616!4.15e-11!49;UBERON:0002780!9.17e-11!39;UBERON:0001890!9.17e-11!39;UBERON:0006240!9.17e-11!39;UBERON:0002791!1.36e-10!29;UBERON:0003528!1.36e-10!29;UBERON:0001893!1.36e-10!29;UBERON:0000153!4.01e-09!94;UBERON:0007811!1.17e-08!86;UBERON:0002950!1.97e-08!4;UBERON:0001891!1.97e-08!4;UBERON:0009616!1.97e-08!4;UBERON:0002298!2.86e-08!6;UBERON:0002257!1.33e-07!3;UBERON:0002021!3.02e-07!10;UBERON:0000411!3.02e-07!10;UBERON:0001950!3.02e-07!10;UBERON:0002038!3.89e-07!3;UBERON:0002308!3.89e-07!3;UBERON:0009663!3.89e-07!3;UBERON:0009661!3.89e-07!3;UBERON:0006331!3.89e-07!3;UBERON:0000125!3.89e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002257,1.65e-52,3;UBERON:0001948,5.98e-32,5;UBERON:0002315,5.98e-32,5;UBERON:0002240,8.48e-27,6;UBERON:0005174,8.48e-27,6;UBERON:0001137,8.48e-27,6;UBERON:0003076,7.25e-14,12;UBERON:0003057,7.25e-14,12;UBERON:0002020,6.61e-09,34;UBERON:0000489,2.89e-08,21;UBERON:0002038,3.18e-07,3;UBERON:0009663,3.18e-07,3;UBERON:0009661,3.18e-07,3;UBERON:0000125,3.18e-07,3;UBERON:0002308,3.18e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0,0.395658863190582,0.274462930807229,0,0.279182999001381,0.56276261003168,2.29197371665215,1.76777151284201,1.28134512719193,1.67759501242771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0,0,0,0.150722640552623,0.352766121407114,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15212002503146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.343706364687375,0,0.755393897389701,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | |||
|short_description=p@chr10:101630272..101630276,+ | |||
}} |
Revision as of 15:36, 12 September 2013
Short description: | p@chr10:101630272..101630276, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:101630272..101630276, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.65e-52 | 3 |
CNS neuron (sensu Vertebrata) | 7.48e-13 | 23 |
neuroblast (sensu Vertebrata) | 7.48e-13 | 23 |
neuron | 3.70e-09 | 33 |
neuronal stem cell | 3.70e-09 | 33 |
neuroblast | 3.70e-09 | 33 |
electrically signaling cell | 3.70e-09 | 33 |
electrically responsive cell | 7.68e-08 | 39 |
electrically active cell | 7.68e-08 | 39 |
neuron of the substantia nigra | 3.18e-07 | 3 |
neural cell | 3.65e-07 | 43 |
ectodermal cell | 5.16e-07 | 44 |
neurectodermal cell | 5.16e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
ventral horn of spinal cord | 1.65e-52 | 3 |
regional part of spinal cord | 5.98e-32 | 5 |
gray matter of spinal cord | 5.98e-32 | 5 |
spinal cord | 8.48e-27 | 6 |
dorsal region element | 8.48e-27 | 6 |
dorsum | 8.48e-27 | 6 |
posterior neural tube | 7.25e-14 | 12 |
chordal neural plate | 7.25e-14 | 12 |
gray matter | 6.61e-09 | 34 |
cavitated compound organ | 2.89e-08 | 21 |
substantia nigra | 3.18e-07 | 3 |
telencephalic nucleus | 3.18e-07 | 3 |
midbrain nucleus | 3.18e-07 | 3 |
neural nucleus | 3.18e-07 | 3 |
nucleus of brain | 3.18e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.