FFCP PHASE1:Mm9::chr10:20881239..20881254,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17863|HGNC=|MCL_coexpression_id=633|UniProt=E9Q4W1,P06876,F6TDP3,Q3UUX5,Q8BU17|association_with_transcript=-449bp_to_ENSMUST00000020156,ENSMUST00000020158,ENSMUST00000169315,NM_001198914,NM_010848,uc007eog.1,uc007eoh.1,uc007eoi.1_5end|description=CAGE_peak_5_at_Myb_5end|id=chr10:20881239..20881254,-|ontology_enrichment_celltype=CL:0000988!4.24e-08!32;CL:0002032!4.24e-08!32;CL:0000037!4.24e-08!32;CL:0000566!4.24e-08!32;CL:0000837!4.24e-08!32|ontology_enrichment_celltype_v019_2=CL:0000049,5.23e-08,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.83e-10!45;UBERON:0003061!2.83e-10!45;UBERON:0002193!3.70e-10!48;UBERON:0004177!6.19e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.78e-14,48;UBERON:0002405,7.78e-14,48;UBERON:0002390,1.49e-13,45;UBERON:0003061,1.49e-13,45;UBERON:0004177,1.88e-10,29;UBERON:0005057,1.88e-10,29;UBERON:0000077,1.67e-09,35;UBERON:0002370,2.48e-08,23;UBERON:0000974,2.48e-08,23;UBERON:0004807,2.48e-08,23;UBERON:0005058,2.48e-08,23;UBERON:0003351,2.48e-08,23;UBERON:0009113,2.48e-08,23;UBERON:0003295,2.48e-08,23;UBERON:0009722,2.48e-08,23;UBERON:0005562,2.48e-08,23;UBERON:0007690,2.48e-08,23;UBERON:0003081,3.97e-08,87;UBERON:0006562,6.73e-08,24;UBERON:0003408,6.73e-08,24;UBERON:0001557,6.73e-08,24;UBERON:0001042,6.73e-08,24;UBERON:0008814,6.73e-08,24;UBERON:0009145,6.73e-08,24;UBERON:0000072,8.59e-07,27|phase1_expression=0,0,0,0,0,0.671517087647559,0.467225281191051,0.645616617207881,0.985521055061667,0.468129052643987,0.171217968225505,0.159544317990673,0.684802919724823,0.174840804837995,0.666219523631325,1.01237633694913,0.699561878128147,0.788655413395594,1.7824876368746,1.27316895539409,0.340173160604279,1.48936426801328,3.13439746966722,0.159992422793407,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0.866554859253824,0.166234645358492,0.204169356262369,0.837063261473815,0,1.0470474879476,1.76469446409304,0.683045484958446,0.971020706062307,0,0,0,0,0,0.219686182734472,0,0,0,0.838913030288682,0.725362142011344,0.336093799142464,0,0,0.515672092277442,0.404632921719196,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0.768436610643109,0,0,0.210324961351382,0,0,0.244981598429908,0.191690942036473,0,2.20231761998777,0.383062014255563,0.614426133024974,0.263772575460388,0.548925861614458,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.427115042397309,0.186399445825301,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.03575153458869,0,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,1.76922110389975,0,2.65009822152472,0.969750506270444,1.86391761218122,0,0.209446706813455,0.255457055208591,3.59445373517761,2.39961092397363,2.79554499560742,0.299581278809645,0,0,0,0,0,0.162241263067758,0.101839363850316,2.73695335342205,1.0108910337347,0,0.260240885925407,0.459804208866946,0.540186389416048,1.05493372485001,1.15662048557257,0.512454881139399,0.562210347358373,0.258703370739016,0,0.378212160335639,0,0,0.278047249225598,0,0,0,1.40442637462647,5.1469581422943,3.6941254921427,0.207125772535502,0.234526059981096,0,0,0,0,0,0.268273401399619,0.233530684734339,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0,0,0.823236899034275,0,0.528901133327089,0,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.38992817423824,0,0,0.597423819763102,0,0,0,0.407302655690628,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0.72353147925725,0,0.287696137450811,1.29708181420028,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0.234690248288502,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0.54390568381871,0,0,0.160550589987792,0.117211686592203,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.329940245945071,0,0,0.604647113929502,0,0,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0.582961673259701,0.18542530201051,0.683483523191411,0,0.370389054739423,1.31857919903284,1.36694227721025,1.37266903923914,4.41943917984024,5.59805809294632,5.94259887359022,0.954670618015114,0.316335993581135,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.495920734352016,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0.576060012515731,3.16011120628178,0,0.205421914329655,0.51968329191118,0.716106782669926,1.98681354781265,2.76449533895928,1.9199638532695,2.92802704849628,2.66723823292499,5.04130925684203,2.43644701849381,2.79014340756955,2.57129184799452,0,0,0,0,0,0.187682475451182,1.46521299413812,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.888986911206461,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0,0.0936415074698824,0.0640251524048693,0.34461281373368,0,0.231768651889711,0.38581844092741,0.412085900803307,0,0,0,0,0.145346416632329,0.188218760830661,0.169229215783353,0,0.263069711437843,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0.859484216193193,0,0.220591419119515,0.695603506861264|short_description=p5@Myb}} | ||
|EntrezGene=17863 | |||
|HGNC= | |||
|MCL_coexpression_id=633 | |||
|UniProt=E9Q4W1,P06876,F6TDP3,Q3UUX5,Q8BU17 | |||
|association_with_transcript=-449bp_to_ENSMUST00000020156,ENSMUST00000020158,ENSMUST00000169315,NM_001198914,NM_010848,uc007eog.1,uc007eoh.1,uc007eoi.1_5end | |||
|description=CAGE_peak_5_at_Myb_5end | |||
|id=chr10:20881239..20881254,- | |||
|ontology_enrichment_celltype=CL:0000988!4.24e-08!32;CL:0002032!4.24e-08!32;CL:0000037!4.24e-08!32;CL:0000566!4.24e-08!32;CL:0000837!4.24e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,5.23e-08,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.83e-10!45;UBERON:0003061!2.83e-10!45;UBERON:0002193!3.70e-10!48;UBERON:0004177!6.19e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.78e-14,48;UBERON:0002405,7.78e-14,48;UBERON:0002390,1.49e-13,45;UBERON:0003061,1.49e-13,45;UBERON:0004177,1.88e-10,29;UBERON:0005057,1.88e-10,29;UBERON:0000077,1.67e-09,35;UBERON:0002370,2.48e-08,23;UBERON:0000974,2.48e-08,23;UBERON:0004807,2.48e-08,23;UBERON:0005058,2.48e-08,23;UBERON:0003351,2.48e-08,23;UBERON:0009113,2.48e-08,23;UBERON:0003295,2.48e-08,23;UBERON:0009722,2.48e-08,23;UBERON:0005562,2.48e-08,23;UBERON:0007690,2.48e-08,23;UBERON:0003081,3.97e-08,87;UBERON:0006562,6.73e-08,24;UBERON:0003408,6.73e-08,24;UBERON:0001557,6.73e-08,24;UBERON:0001042,6.73e-08,24;UBERON:0008814,6.73e-08,24;UBERON:0009145,6.73e-08,24;UBERON:0000072,8.59e-07,27 | |||
|phase1_expression=0,0,0,0,0,0.671517087647559,0.467225281191051,0.645616617207881,0.985521055061667,0.468129052643987,0.171217968225505,0.159544317990673,0.684802919724823,0.174840804837995,0.666219523631325,1.01237633694913,0.699561878128147,0.788655413395594,1.7824876368746,1.27316895539409,0.340173160604279,1.48936426801328,3.13439746966722,0.159992422793407,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0.866554859253824,0.166234645358492,0.204169356262369,0.837063261473815,0,1.0470474879476,1.76469446409304,0.683045484958446,0.971020706062307,0,0,0,0,0,0.219686182734472,0,0,0,0.838913030288682,0.725362142011344,0.336093799142464,0,0,0.515672092277442,0.404632921719196,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0.768436610643109,0,0,0.210324961351382,0,0,0.244981598429908,0.191690942036473,0,2.20231761998777,0.383062014255563,0.614426133024974,0.263772575460388,0.548925861614458,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.427115042397309,0.186399445825301,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.03575153458869,0,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,1.76922110389975,0,2.65009822152472,0.969750506270444,1.86391761218122,0,0.209446706813455,0.255457055208591,3.59445373517761,2.39961092397363,2.79554499560742,0.299581278809645,0,0,0,0,0,0.162241263067758,0.101839363850316,2.73695335342205,1.0108910337347,0,0.260240885925407,0.459804208866946,0.540186389416048,1.05493372485001,1.15662048557257,0.512454881139399,0.562210347358373,0.258703370739016,0,0.378212160335639,0,0,0.278047249225598,0,0,0,1.40442637462647,5.1469581422943,3.6941254921427,0.207125772535502,0.234526059981096,0,0,0,0,0,0.268273401399619,0.233530684734339,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0,0,0.823236899034275,0,0.528901133327089,0,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.38992817423824,0,0,0.597423819763102,0,0,0,0.407302655690628,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0.72353147925725,0,0.287696137450811,1.29708181420028,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0.234690248288502,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0.54390568381871,0,0,0.160550589987792,0.117211686592203,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.329940245945071,0,0,0.604647113929502,0,0,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0.582961673259701,0.18542530201051,0.683483523191411,0,0.370389054739423,1.31857919903284,1.36694227721025,1.37266903923914,4.41943917984024,5.59805809294632,5.94259887359022,0.954670618015114,0.316335993581135,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.495920734352016,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0.576060012515731,3.16011120628178,0,0.205421914329655,0.51968329191118,0.716106782669926,1.98681354781265,2.76449533895928,1.9199638532695,2.92802704849628,2.66723823292499,5.04130925684203,2.43644701849381,2.79014340756955,2.57129184799452,0,0,0,0,0,0.187682475451182,1.46521299413812,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.888986911206461,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0,0.0936415074698824,0.0640251524048693,0.34461281373368,0,0.231768651889711,0.38581844092741,0.412085900803307,0,0,0,0,0.145346416632329,0.188218760830661,0.169229215783353,0,0.263069711437843,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0.859484216193193,0,0.220591419119515,0.695603506861264 | |||
|short_description=p5@Myb | |||
}} |
Revision as of 16:24, 12 September 2013
Short description: | p5@Myb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Myb_5end |
Coexpression cluster: | MCL_coexpression_mm9:633 |
Association with transcript: | -449bp_to_ENSMUST00000020156, ENSMUST00000020158, ENSMUST00000169315, NM_001198914, NM_010848, uc007eog.1, uc007eoh.1, uc007eoi.1_5end |
EntrezGene: | Myb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 5.23e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.78e-14 | 48 |
immune system | 7.78e-14 | 48 |
hematopoietic system | 1.49e-13 | 45 |
blood island | 1.49e-13 | 45 |
hemopoietic organ | 1.88e-10 | 29 |
immune organ | 1.88e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 1.67e-09 | 35 |
thymus | 2.48e-08 | 23 |
neck | 2.48e-08 | 23 |
respiratory system epithelium | 2.48e-08 | 23 |
hemolymphoid system gland | 2.48e-08 | 23 |
pharyngeal epithelium | 2.48e-08 | 23 |
thymic region | 2.48e-08 | 23 |
pharyngeal gland | 2.48e-08 | 23 |
entire pharyngeal arch endoderm | 2.48e-08 | 23 |
thymus primordium | 2.48e-08 | 23 |
early pharyngeal endoderm | 2.48e-08 | 23 |
lateral plate mesoderm | 3.97e-08 | 87 |
pharynx | 6.73e-08 | 24 |
gland of gut | 6.73e-08 | 24 |
upper respiratory tract | 6.73e-08 | 24 |
chordate pharynx | 6.73e-08 | 24 |
pharyngeal arch system | 6.73e-08 | 24 |
pharyngeal region of foregut | 6.73e-08 | 24 |
segment of respiratory tract | 8.59e-07 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.