FFCP PHASE1:Mm9::chr10:26542366..26542385,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=73910|HGNC=|MCL_coexpression_id=152|UniProt=|association_with_transcript=-22bp_to_ENSMUST00000135866_5end|description=CAGE_peak_3_at_Arhgap18_5end|id=chr10:26542366..26542385,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!3.61e-12!14;UBERON:0000117!3.61e-12!14;UBERON:0000171!3.61e-12!14;UBERON:0000170!3.61e-12!14;UBERON:0005597!3.61e-12!14;UBERON:0000118!3.61e-12!14;UBERON:0005153!1.90e-09!17;UBERON:0005178!1.90e-09!17;UBERON:0005181!1.90e-09!17;UBERON:0002224!1.90e-09!17;UBERON:0000915!1.90e-09!17;UBERON:0008947!1.90e-09!17;UBERON:0003258!1.90e-09!17|ontology_enrichment_uberon_v019_2=UBERON:0002048,5.21e-33,14;UBERON:0000117,5.21e-33,14;UBERON:0000171,5.21e-33,14;UBERON:0000170,5.21e-33,14;UBERON:0005597,5.21e-33,14;UBERON:0000118,5.21e-33,14;UBERON:0005153,6.05e-27,17;UBERON:0005178,6.05e-27,17;UBERON:0005181,6.05e-27,17;UBERON:0002224,6.05e-27,17;UBERON:0000915,6.05e-27,17;UBERON:0008947,6.05e-27,17;UBERON:0003258,6.05e-27,17;UBERON:0005157,1.08e-22,20;UBERON:0000065,2.54e-10,41;UBERON:0001004,4.86e-10,42|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0.83115217823824,0.162241263067758,0,0.497627882440372,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3461786493299,0,0,0,0.469380496577004,2.1775813467436,4.76087281772027,1.75620283072019,4.41378403497335,2.6575762757853,1.91345722388985,3.76885623846197,3.45369963731791,3.18227928879325,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,6.24536374916382,0,0,9.07335676348945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0.375364950902364,1.83151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.666740183404846,0.618105171716683,0,0.505394423527595,0.760437899670719,1.69763707247469,0.936415074698824,1.08842759088278,0.574354689556133,0.476293691283074,0.579421629724277,0.578727661391115,1.64834360321323,1.17759136107518,0.342869252385415,0.887379030796687,0.476872379894642,1.0174249164263,0.752875043322645,0.592302255241736,0.548783918618318,0.789209134313529,0.950628796921032,0.561142271657738,0.593175090620871,0.689531376628944,0,0.929621047115796,0.578719832943424,1.49886346762768,0.935726433781634,0.429742108096597,0.191288332068843,0,0|short_description=p3@Arhgap18}} | ||
|EntrezGene=73910 | |||
|HGNC= | |||
|MCL_coexpression_id=152 | |||
|UniProt= | |||
|association_with_transcript=-22bp_to_ENSMUST00000135866_5end | |||
|description=CAGE_peak_3_at_Arhgap18_5end | |||
|id=chr10:26542366..26542385,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!3.61e-12!14;UBERON:0000117!3.61e-12!14;UBERON:0000171!3.61e-12!14;UBERON:0000170!3.61e-12!14;UBERON:0005597!3.61e-12!14;UBERON:0000118!3.61e-12!14;UBERON:0005153!1.90e-09!17;UBERON:0005178!1.90e-09!17;UBERON:0005181!1.90e-09!17;UBERON:0002224!1.90e-09!17;UBERON:0000915!1.90e-09!17;UBERON:0008947!1.90e-09!17;UBERON:0003258!1.90e-09!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,5.21e-33,14;UBERON:0000117,5.21e-33,14;UBERON:0000171,5.21e-33,14;UBERON:0000170,5.21e-33,14;UBERON:0005597,5.21e-33,14;UBERON:0000118,5.21e-33,14;UBERON:0005153,6.05e-27,17;UBERON:0005178,6.05e-27,17;UBERON:0005181,6.05e-27,17;UBERON:0002224,6.05e-27,17;UBERON:0000915,6.05e-27,17;UBERON:0008947,6.05e-27,17;UBERON:0003258,6.05e-27,17;UBERON:0005157,1.08e-22,20;UBERON:0000065,2.54e-10,41;UBERON:0001004,4.86e-10,42 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0.83115217823824,0.162241263067758,0,0.497627882440372,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3461786493299,0,0,0,0.469380496577004,2.1775813467436,4.76087281772027,1.75620283072019,4.41378403497335,2.6575762757853,1.91345722388985,3.76885623846197,3.45369963731791,3.18227928879325,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,6.24536374916382,0,0,9.07335676348945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0.375364950902364,1.83151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.666740183404846,0.618105171716683,0,0.505394423527595,0.760437899670719,1.69763707247469,0.936415074698824,1.08842759088278,0.574354689556133,0.476293691283074,0.579421629724277,0.578727661391115,1.64834360321323,1.17759136107518,0.342869252385415,0.887379030796687,0.476872379894642,1.0174249164263,0.752875043322645,0.592302255241736,0.548783918618318,0.789209134313529,0.950628796921032,0.561142271657738,0.593175090620871,0.689531376628944,0,0.929621047115796,0.578719832943424,1.49886346762768,0.935726433781634,0.429742108096597,0.191288332068843,0,0 | |||
|short_description=p3@Arhgap18 | |||
}} |
Revision as of 16:31, 12 September 2013
Short description: | p3@Arhgap18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Arhgap18_5end |
Coexpression cluster: | MCL_coexpression_mm9:152 |
Association with transcript: | -22bp_to_ENSMUST00000135866_5end |
EntrezGene: | Arhgap18 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 5.21e-33 | 14 |
respiratory tube | 5.21e-33 | 14 |
respiration organ | 5.21e-33 | 14 |
pair of lungs | 5.21e-33 | 14 |
lung primordium | 5.21e-33 | 14 |
lung bud | 5.21e-33 | 14 |
epithelial bud | 6.05e-27 | 17 |
thoracic cavity element | 6.05e-27 | 17 |
thoracic segment organ | 6.05e-27 | 17 |
thoracic cavity | 6.05e-27 | 17 |
thoracic segment of trunk | 6.05e-27 | 17 |
respiratory primordium | 6.05e-27 | 17 |
endoderm of foregut | 6.05e-27 | 17 |
epithelial fold | 1.08e-22 | 20 |
respiratory tract | 2.54e-10 | 41 |
respiratory system | 4.86e-10 | 42 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.