FFCP PHASE1:Mm9::chr10:40941203..40941208,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=124|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:40941203..40941208,-|id=chr10:40941203..40941208,-|ontology_enrichment_celltype=CL:0002027!1.22e-20!3;CL:0002006!1.22e-20!3;CL:0002024!1.22e-20!3;CL:0000553!1.29e-10!6;CL:0000556!1.29e-10!6;CL:0000050!3.07e-07!9|ontology_enrichment_celltype_v019_2=CL:0002027,1.33e-65,3;CL:0002006,1.33e-65,3;CL:0002024,1.33e-65,3;CL:0000553,2.03e-33,6;CL:0000556,2.03e-33,6;CL:0000050,1.19e-22,9;CL:0000839,5.32e-16,13;CL:0000763,3.50e-13,16;CL:0000049,3.01e-11,19;CL:0002031,9.29e-09,25;CL:0000988,5.08e-07,32;CL:0002032,5.08e-07,32;CL:0000037,5.08e-07,32;CL:0000837,5.08e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!2.29e-17!6;UBERON:0004457!2.29e-17!6;UBERON:0000042!2.29e-17!6;UBERON:0004854!2.29e-17!6;UBERON:0009034!2.29e-17!6;UBERON:0002095!2.29e-17!6;UBERON:0004782!2.29e-17!6;UBERON:0003281!2.29e-17!6;UBERON:0009664!2.29e-17!6;UBERON:0002296!2.29e-17!6;UBERON:0005602!2.29e-17!6;UBERON:0001179!2.29e-17!6;UBERON:0006293!2.29e-17!6;UBERON:0003887!8.60e-16!10;UBERON:0000981!1.09e-14!4;UBERON:0002495!1.09e-14!4;UBERON:0003608!1.09e-14!4;UBERON:0003826!1.09e-14!4;UBERON:0008202!1.09e-14!4;UBERON:0004375!1.09e-14!4;UBERON:0002428!1.09e-14!4;UBERON:0003464!1.09e-14!4;UBERON:0003606!1.09e-14!4;UBERON:0009749!1.09e-14!4;UBERON:0003860!1.09e-14!4;UBERON:0005856!1.09e-14!4;UBERON:0005866!1.09e-14!4;UBERON:0007828!1.09e-14!4;UBERON:0005254!1.09e-14!4;UBERON:0001271!1.09e-14!4;UBERON:0002091!1.09e-14!4;UBERON:0001464!1.09e-14!4;UBERON:0003285!1.09e-14!4;UBERON:0010129!1.09e-14!4;UBERON:0006234!1.09e-14!4;UBERON:0005418!7.15e-12!5;UBERON:0002472!7.15e-12!5;UBERON:0008784!7.15e-12!5;UBERON:0006058!7.15e-12!5;UBERON:0007823!7.15e-12!5;UBERON:0004709!7.15e-12!5;UBERON:0005420!7.15e-12!5;UBERON:0006057!7.15e-12!5;UBERON:0000978!7.15e-12!5;UBERON:0002103!7.15e-12!5;UBERON:0000376!7.15e-12!5;UBERON:0000154!7.15e-12!5;UBERON:0005730!7.15e-12!5;UBERON:0001474!2.76e-10!22;UBERON:0004765!2.76e-10!22;UBERON:0001434!2.76e-10!22;UBERON:0000075!5.47e-10!6;UBERON:0002529!5.47e-10!6;UBERON:0003081!1.46e-07!88;UBERON:0002204!5.88e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.50e-13,16;UBERON:0001474,7.78e-10,22;UBERON:0004765,7.78e-10,22;UBERON:0001434,7.78e-10,22;UBERON:0002390,1.45e-08,45;UBERON:0003061,1.45e-08,45;UBERON:0002193,4.46e-08,48;UBERON:0002405,4.46e-08,48;UBERON:0002204,5.08e-07,32|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,4.45445588257617,17.4890469532037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0.565105371014073,0.820165366326151,1.14389086603261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr10:40941203..40941208,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=124 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:40941203..40941208,- | |||
|id=chr10:40941203..40941208,- | |||
|ontology_enrichment_celltype=CL:0002027!1.22e-20!3;CL:0002006!1.22e-20!3;CL:0002024!1.22e-20!3;CL:0000553!1.29e-10!6;CL:0000556!1.29e-10!6;CL:0000050!3.07e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,1.33e-65,3;CL:0002006,1.33e-65,3;CL:0002024,1.33e-65,3;CL:0000553,2.03e-33,6;CL:0000556,2.03e-33,6;CL:0000050,1.19e-22,9;CL:0000839,5.32e-16,13;CL:0000763,3.50e-13,16;CL:0000049,3.01e-11,19;CL:0002031,9.29e-09,25;CL:0000988,5.08e-07,32;CL:0002032,5.08e-07,32;CL:0000037,5.08e-07,32;CL:0000837,5.08e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!2.29e-17!6;UBERON:0004457!2.29e-17!6;UBERON:0000042!2.29e-17!6;UBERON:0004854!2.29e-17!6;UBERON:0009034!2.29e-17!6;UBERON:0002095!2.29e-17!6;UBERON:0004782!2.29e-17!6;UBERON:0003281!2.29e-17!6;UBERON:0009664!2.29e-17!6;UBERON:0002296!2.29e-17!6;UBERON:0005602!2.29e-17!6;UBERON:0001179!2.29e-17!6;UBERON:0006293!2.29e-17!6;UBERON:0003887!8.60e-16!10;UBERON:0000981!1.09e-14!4;UBERON:0002495!1.09e-14!4;UBERON:0003608!1.09e-14!4;UBERON:0003826!1.09e-14!4;UBERON:0008202!1.09e-14!4;UBERON:0004375!1.09e-14!4;UBERON:0002428!1.09e-14!4;UBERON:0003464!1.09e-14!4;UBERON:0003606!1.09e-14!4;UBERON:0009749!1.09e-14!4;UBERON:0003860!1.09e-14!4;UBERON:0005856!1.09e-14!4;UBERON:0005866!1.09e-14!4;UBERON:0007828!1.09e-14!4;UBERON:0005254!1.09e-14!4;UBERON:0001271!1.09e-14!4;UBERON:0002091!1.09e-14!4;UBERON:0001464!1.09e-14!4;UBERON:0003285!1.09e-14!4;UBERON:0010129!1.09e-14!4;UBERON:0006234!1.09e-14!4;UBERON:0005418!7.15e-12!5;UBERON:0002472!7.15e-12!5;UBERON:0008784!7.15e-12!5;UBERON:0006058!7.15e-12!5;UBERON:0007823!7.15e-12!5;UBERON:0004709!7.15e-12!5;UBERON:0005420!7.15e-12!5;UBERON:0006057!7.15e-12!5;UBERON:0000978!7.15e-12!5;UBERON:0002103!7.15e-12!5;UBERON:0000376!7.15e-12!5;UBERON:0000154!7.15e-12!5;UBERON:0005730!7.15e-12!5;UBERON:0001474!2.76e-10!22;UBERON:0004765!2.76e-10!22;UBERON:0001434!2.76e-10!22;UBERON:0000075!5.47e-10!6;UBERON:0002529!5.47e-10!6;UBERON:0003081!1.46e-07!88;UBERON:0002204!5.88e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.50e-13,16;UBERON:0001474,7.78e-10,22;UBERON:0004765,7.78e-10,22;UBERON:0001434,7.78e-10,22;UBERON:0002390,1.45e-08,45;UBERON:0003061,1.45e-08,45;UBERON:0002193,4.46e-08,48;UBERON:0002405,4.46e-08,48;UBERON:0002204,5.08e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,4.45445588257617,17.4890469532037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0.565105371014073,0.820165366326151,1.14389086603261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr10:40941203..40941208,- | |||
}} |
Revision as of 16:42, 12 September 2013
Short description: | p@chr10:40941203..40941208, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:40941203..40941208, - |
Coexpression cluster: | MCL_coexpression_mm9:124 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 1.33e-65 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.33e-65 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.33e-65 | 3 |
megakaryocyte progenitor cell | 2.03e-33 | 6 |
megakaryocyte | 2.03e-33 | 6 |
megakaryocyte-erythroid progenitor cell | 1.19e-22 | 9 |
myeloid lineage restricted progenitor cell | 5.32e-16 | 13 |
myeloid cell | 3.50e-13 | 16 |
common myeloid progenitor | 3.01e-11 | 19 |
hematopoietic lineage restricted progenitor cell | 9.29e-09 | 25 |
hematopoietic cell | 5.08e-07 | 32 |
hematopoietic oligopotent progenitor cell | 5.08e-07 | 32 |
hematopoietic stem cell | 5.08e-07 | 32 |
hematopoietic multipotent progenitor cell | 5.08e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.50e-13 | 16 |
bone element | 7.78e-10 | 22 |
skeletal element | 7.78e-10 | 22 |
skeletal system | 7.78e-10 | 22 |
hematopoietic system | 1.45e-08 | 45 |
blood island | 1.45e-08 | 45 |
hemolymphoid system | 4.46e-08 | 48 |
immune system | 4.46e-08 | 48 |
musculoskeletal system | 5.08e-07 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.