FFCP PHASE1:Mm9::chr10:79479480..79479503,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=70719|HGNC=|MCL_coexpression_id=36|UniProt=|association_with_transcript=0bp_to_ENSMUST00000140974_5end|description=CAGE_peak_2_at_Hmha1_5end|id=chr10:79479480..79479503,+|ontology_enrichment_celltype=CL:0000988!3.62e-15!32;CL:0002032!3.62e-15!32;CL:0000037!3.62e-15!32;CL:0000566!3.62e-15!32;CL:0000837!3.62e-15!32;CL:0002031!6.63e-13!25;CL:0000049!1.43e-09!19;CL:0002320!4.58e-09!46;CL:0000134!4.58e-09!46;CL:0000738!1.74e-08!17;CL:0002087!1.74e-08!17;CL:0000763!2.32e-08!16;CL:0000838!2.60e-07!12;CL:0000839!6.29e-07!13;CL:0000542!9.18e-07!13;CL:0000051!9.18e-07!13|ontology_enrichment_celltype_v019_2=CL:0000988,2.15e-17,32;CL:0002032,2.15e-17,32;CL:0000037,2.15e-17,32;CL:0000837,2.15e-17,32;CL:0002031,4.11e-15,25;CL:0002320,5.13e-13,46;CL:0000134,5.13e-13,46;CL:0000049,3.95e-11,19;CL:0000763,1.09e-09,16;CL:0000738,1.99e-09,17;CL:0002087,1.99e-09,17;CL:0000219,7.18e-09,54;CL:0000838,1.95e-08,12;CL:0000839,5.61e-08,13;CL:0000084,1.02e-07,11;CL:0000827,1.02e-07,11;CL:0000542,2.22e-07,13;CL:0000051,2.22e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!7.42e-20!70;UBERON:0002193!2.82e-19!48;UBERON:0002390!5.86e-18!45;UBERON:0003061!5.86e-18!45;UBERON:0005057!6.86e-11!51;UBERON:0004177!3.61e-10!29;UBERON:0002384!4.58e-09!46;UBERON:0002371!9.05e-09!16;UBERON:0003081!1.80e-08!88;UBERON:0001041!2.73e-08!92;UBERON:0000077!3.45e-08!97;UBERON:0003408!5.31e-08!24;UBERON:0001474!9.03e-08!22;UBERON:0004765!9.03e-08!22;UBERON:0001434!9.03e-08!22;UBERON:0006562!9.72e-08!24;UBERON:0001557!9.72e-08!24;UBERON:0001042!9.72e-08!24;UBERON:0008814!9.72e-08!24;UBERON:0009145!9.72e-08!24;UBERON:0002370!9.87e-08!23;UBERON:0000974!9.87e-08!23;UBERON:0004807!9.87e-08!23;UBERON:0005058!9.87e-08!23;UBERON:0003351!9.87e-08!23;UBERON:0009113!9.87e-08!23;UBERON:0003295!9.87e-08!23;UBERON:0009722!9.87e-08!23;UBERON:0005562!9.87e-08!23;UBERON:0007690!9.87e-08!23;UBERON:0000926!5.81e-07!193;UBERON:0004120!5.81e-07!193;UBERON:0006603!5.81e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.67e-24,48;UBERON:0002405,4.67e-24,48;UBERON:0002390,1.81e-22,45;UBERON:0003061,1.81e-22,45;UBERON:0004177,5.09e-13,29;UBERON:0005057,5.09e-13,29;UBERON:0002384,5.13e-13,46;UBERON:0000077,5.77e-12,35;UBERON:0001041,1.42e-11,80;UBERON:0003408,2.22e-10,24;UBERON:0002371,3.57e-10,16;UBERON:0002370,4.65e-10,23;UBERON:0000974,4.65e-10,23;UBERON:0004807,4.65e-10,23;UBERON:0005058,4.65e-10,23;UBERON:0003351,4.65e-10,23;UBERON:0009113,4.65e-10,23;UBERON:0003295,4.65e-10,23;UBERON:0009722,4.65e-10,23;UBERON:0005562,4.65e-10,23;UBERON:0007690,4.65e-10,23;UBERON:0006562,4.80e-10,24;UBERON:0001557,4.80e-10,24;UBERON:0001042,4.80e-10,24;UBERON:0008814,4.80e-10,24;UBERON:0009145,4.80e-10,24;UBERON:0003081,6.19e-10,87;UBERON:0001474,9.68e-10,22;UBERON:0004765,9.68e-10,22;UBERON:0001434,9.68e-10,22;UBERON:0001004,9.69e-09,42;UBERON:0000065,1.99e-08,41;UBERON:0005911,2.10e-08,69;UBERON:0002204,4.91e-08,32;UBERON:0000072,6.24e-08,27;UBERON:0003929,2.50e-07,55;UBERON:0002530,3.77e-07,65;UBERON:0002368,4.77e-07,60;UBERON:0001007,7.95e-07,116;UBERON:0001555,7.95e-07,116;UBERON:0007026,7.95e-07,116|phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0,105.493755251768,21.6814632113567,24.1086462111653,2.39705155515707,1.19658238493005,120.525313871569,124.136971434976,8.66085380720723,9.51633756732182,6.29605690315332,47.1615937210565,46.0704496915282,42.438965179803,3.06155844543851,30.4823220186718,18.8063848180033,7.03966660290989,4.12936705920906,0,0,0.215471232685889,1.33016393619462,1.26015064879965,1.77384408524244,12.065582795733,6.76571266343027,15.8481681015439,0,0,0,87.8916424547506,48.4427913604756,42.9289470058515,98.8228899892104,103.139868228725,57.2902216576761,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,50.6703470294364,128.389099136008,143.512052233832,0.257259436035947,0.286533439938757,1.03134418455488,0,0.528990979272033,0,0,0,19.7977937801908,25.7105254267413,26.2877642530057,11.9840044207362,8.83702102239575,0.103689612308478,0.270011876663381,0,0.285650984403804,0,0,0.287536413054709,0,1.10115880999389,0.638436690425939,0.46081959976873,0.131886287730194,0.0914876436024097,0,0.279182999001381,1.12552522006336,0.45839474333043,0,0.284743361598206,0,0.832988126665025,0,15.6526823898906,6.88339101585109,0,0,0,0,4.63466586434781,0,0,0,0,0,0,0,0,0,0,5.1382745873577,53.6001419149645,3.56261133755579,0.346970653532272,0,0.461230994512117,0.904335843315735,1.41106448562846,0.376999773989026,0,2.31358971071859,28.307537662396,1.94120219936891,7.50861162765338,7.27312879702833,0,0.292780797011547,0,2.55457055208591,13.2994788201571,10.1983464268879,16.9003402007176,0.599162557619291,0.457500602818626,0.125654352112864,1.91206752211504,1.27857728665165,0.83115217823824,0.811206315338788,0.407357455401265,12.4406970610093,0.505445516867349,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0.408218994907967,0.2562274405697,0.374806898238915,0,0,0.189106080167819,0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| ||
|EntrezGene=70719 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000140974_5end | |||
|description=CAGE_peak_2_at_Hmha1_5end | |||
|id=chr10:79479480..79479503,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.62e-15!32;CL:0002032!3.62e-15!32;CL:0000037!3.62e-15!32;CL:0000566!3.62e-15!32;CL:0000837!3.62e-15!32;CL:0002031!6.63e-13!25;CL:0000049!1.43e-09!19;CL:0002320!4.58e-09!46;CL:0000134!4.58e-09!46;CL:0000738!1.74e-08!17;CL:0002087!1.74e-08!17;CL:0000763!2.32e-08!16;CL:0000838!2.60e-07!12;CL:0000839!6.29e-07!13;CL:0000542!9.18e-07!13;CL:0000051!9.18e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.15e-17,32;CL:0002032,2.15e-17,32;CL:0000037,2.15e-17,32;CL:0000837,2.15e-17,32;CL:0002031,4.11e-15,25;CL:0002320,5.13e-13,46;CL:0000134,5.13e-13,46;CL:0000049,3.95e-11,19;CL:0000763,1.09e-09,16;CL:0000738,1.99e-09,17;CL:0002087,1.99e-09,17;CL:0000219,7.18e-09,54;CL:0000838,1.95e-08,12;CL:0000839,5.61e-08,13;CL:0000084,1.02e-07,11;CL:0000827,1.02e-07,11;CL:0000542,2.22e-07,13;CL:0000051,2.22e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!7.42e-20!70;UBERON:0002193!2.82e-19!48;UBERON:0002390!5.86e-18!45;UBERON:0003061!5.86e-18!45;UBERON:0005057!6.86e-11!51;UBERON:0004177!3.61e-10!29;UBERON:0002384!4.58e-09!46;UBERON:0002371!9.05e-09!16;UBERON:0003081!1.80e-08!88;UBERON:0001041!2.73e-08!92;UBERON:0000077!3.45e-08!97;UBERON:0003408!5.31e-08!24;UBERON:0001474!9.03e-08!22;UBERON:0004765!9.03e-08!22;UBERON:0001434!9.03e-08!22;UBERON:0006562!9.72e-08!24;UBERON:0001557!9.72e-08!24;UBERON:0001042!9.72e-08!24;UBERON:0008814!9.72e-08!24;UBERON:0009145!9.72e-08!24;UBERON:0002370!9.87e-08!23;UBERON:0000974!9.87e-08!23;UBERON:0004807!9.87e-08!23;UBERON:0005058!9.87e-08!23;UBERON:0003351!9.87e-08!23;UBERON:0009113!9.87e-08!23;UBERON:0003295!9.87e-08!23;UBERON:0009722!9.87e-08!23;UBERON:0005562!9.87e-08!23;UBERON:0007690!9.87e-08!23;UBERON:0000926!5.81e-07!193;UBERON:0004120!5.81e-07!193;UBERON:0006603!5.81e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.67e-24,48;UBERON:0002405,4.67e-24,48;UBERON:0002390,1.81e-22,45;UBERON:0003061,1.81e-22,45;UBERON:0004177,5.09e-13,29;UBERON:0005057,5.09e-13,29;UBERON:0002384,5.13e-13,46;UBERON:0000077,5.77e-12,35;UBERON:0001041,1.42e-11,80;UBERON:0003408,2.22e-10,24;UBERON:0002371,3.57e-10,16;UBERON:0002370,4.65e-10,23;UBERON:0000974,4.65e-10,23;UBERON:0004807,4.65e-10,23;UBERON:0005058,4.65e-10,23;UBERON:0003351,4.65e-10,23;UBERON:0009113,4.65e-10,23;UBERON:0003295,4.65e-10,23;UBERON:0009722,4.65e-10,23;UBERON:0005562,4.65e-10,23;UBERON:0007690,4.65e-10,23;UBERON:0006562,4.80e-10,24;UBERON:0001557,4.80e-10,24;UBERON:0001042,4.80e-10,24;UBERON:0008814,4.80e-10,24;UBERON:0009145,4.80e-10,24;UBERON:0003081,6.19e-10,87;UBERON:0001474,9.68e-10,22;UBERON:0004765,9.68e-10,22;UBERON:0001434,9.68e-10,22;UBERON:0001004,9.69e-09,42;UBERON:0000065,1.99e-08,41;UBERON:0005911,2.10e-08,69;UBERON:0002204,4.91e-08,32;UBERON:0000072,6.24e-08,27;UBERON:0003929,2.50e-07,55;UBERON:0002530,3.77e-07,65;UBERON:0002368,4.77e-07,60;UBERON:0001007,7.95e-07,116;UBERON:0001555,7.95e-07,116;UBERON:0007026,7.95e-07,116 | |||
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| |||
|short_description=p2@Hmha1 | |||
}} |
Revision as of 17:33, 12 September 2013
Short description: | p2@Hmha1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Hmha1_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000140974_5end |
EntrezGene: | Hmha1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.15e-17 | 32 |
hematopoietic oligopotent progenitor cell | 2.15e-17 | 32 |
hematopoietic stem cell | 2.15e-17 | 32 |
hematopoietic multipotent progenitor cell | 2.15e-17 | 32 |
hematopoietic lineage restricted progenitor cell | 4.11e-15 | 25 |
connective tissue cell | 5.13e-13 | 46 |
mesenchymal cell | 5.13e-13 | 46 |
common myeloid progenitor | 3.95e-11 | 19 |
myeloid cell | 1.09e-09 | 16 |
leukocyte | 1.99e-09 | 17 |
nongranular leukocyte | 1.99e-09 | 17 |
motile cell | 7.18e-09 | 54 |
lymphoid lineage restricted progenitor cell | 1.95e-08 | 12 |
myeloid lineage restricted progenitor cell | 5.61e-08 | 13 |
T cell | 1.02e-07 | 11 |
pro-T cell | 1.02e-07 | 11 |
lymphocyte | 2.22e-07 | 13 |
common lymphoid progenitor | 2.22e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.