FFCP PHASE1:Hg19::chr2:27994656..27994667,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9553|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14487|TSSclassifier=S|UniProt=|association_with_transcript=45bp_to_ENST00000472192_5end|description=CAGE_peak_4_at_MRPL33_5end|id=chr2:27994656..27994667,+|ontology_enrichment_celltype=CL:0002057!5.16e-07!42|ontology_enrichment_celltype_v019=CL:0000094;1.31e-15;8!CL:0000081;5.23e-11;11!CL:0000775;5.13e-09;3!CL:1000507;2.91e-08;10!CL:1000494;2.91e-08;10!CL:0000767;3.11e-08;3!CL:0000239;3.35e-08;3!CL:1000615;3.35e-08;3!CL:0002306;3.35e-08;3!CL:0000064;3.78e-08;3!CL:0000067;3.78e-08;3!CL:0005012;3.78e-08;3!CL:0002304;3.78e-08;3|ontology_enrichment_celltype_v019_2=CL:0000094,1.25e-15,8;CL:0000081,5.07e-11,11;CL:0000775,4.82e-09,3;CL:0000064,1.49e-08,3;CL:0000067,1.49e-08,3;CL:0005012,1.49e-08,3;CL:0002304,1.49e-08,3;CL:0000763,1.51e-08,108;CL:0000049,1.51e-08,108;CL:0000766,2.39e-08,72;CL:1000507,2.43e-08,10;CL:1000494,2.43e-08,10;CL:0000767,3.23e-08,3;CL:0000239,4.03e-08,3;CL:1000615,4.03e-08,3;CL:0002306,4.03e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004211;2.91e-08;10!UBERON:0009773;2.91e-08;10!UBERON:0001231;2.91e-08;10!UBERON:0004810;2.91e-08;10!UBERON:0006853;3.35e-08;3!UBERON:0007685;3.35e-08;3!UBERON:0004134;3.35e-08;3!UBERON:0001778;3.78e-08;3!UBERON:0001775;3.78e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.49e-08,3;UBERON:0001775,1.49e-08,3;UBERON:0004810,2.43e-08,10;UBERON:0006853,4.03e-08,3;UBERON:0007685,4.03e-08,3;UBERON:0004134,4.03e-08,3|phase1_expression=0.181678379270557,0,0,0,0,0,5.06599756336621,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0.791300934685361,0.247532705920093,0,0,0.602694528023977,0,0,0.61560529038394,0.204000691244253,0.940364164434263,0.286235987131057,0.684372125364421,0.753255837568817,0,0,0.157421562627358,4.72037132218685,1.15148819429164,1.54816123316076,0,0.30120591877825,0,0.0774672005803016,0,1.17440175733939,1.66198622559563,1.40381113229099,0.868043482863407,0,0,0,0.290796477559129,0.377875943688809,0.485168122375632,0.232429036905685,0,0.619412741790207,0.28769239232215,0.256160706529101,0,1.37898272294647,1.93645405075148,0,0.376484679085209,0.272906150057846,0.224723484445085,0.306083892370903,1.28371610830437,1.91801137739712,0.659702600373432,0.199463657621632,0.852449501065388,0.580418477257168,0.56738522469114,0.622822248995575,0.251248665256743,0,0.868755378820466,1.21079900526674,0.368277635987565,0,1.69004229049553,0.425208599930087,0,1.01095768031846,1.50176892841506,1.12507910687956,1.14005097496499,1.19350006319454,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,1.12101712596307,0.790152254325231,1.180258620683,0.786021525498329,1.23360899399706,0.501559486172034,0.651844533267181,0.946895611469467,0,0.111410456885174,0.589211814949674,0.443067789167242,0.541607727530031,0,0.130059347559878,0,0,0.289803085735052,0.593146252648242,0.267540828089713,0,0,0.383220493601921,0.34362744548263,0.506039384039006,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.80642697289893,0.802320587350522,0.289648807765598,0,0,0.255725123687061,0.722878304769133,0.50133791063589,0.289693037921647,0,0,1.41802225746102,1.99556457716308,2.45937399940753,0.392937226493138,1.45718115317017,0,0,0,0,0.476981248610684,0.571994910780128,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0.402829317109147,1.52054421143703,1.22031028774085,0.735326160691737,0,0.17859945656816,0.22452937262617,0,0,0.949265659568129,0.549605231791222,3.9534125230819,0,0.436094052142534,0.496971951695318,0.25326102332916,1.32409180813219,0.286836620748814,0,0,0,1.2333377420858,0,0.404132016209064,0,0,0,1.17160715916898,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0.337552664482532,0.194874010322397,0.757301322732344,0,0,0.355009592516614,0.201504196455281,0.169560592310488,0.57978255948989,0.272746120590835,0.286804595389004,0.121973706129595,0.265059536642971,0.348581828608555,0.10366105501537,0.504641701751257,0.72995471815166,0,0,0,0,0,0.591534000199219,1.85443159085912,1.20505514941741,0.882351781859152,0.217879444092406,0.237270619111097,0.943819157121151,0.392442930250692,0.769494313892781,0,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0,0.548751427043128,1.1240175325762,0.301586917234893,0.925884451585296,0.325808305310325,0,0,0.34779121492523,0.469634776943287,1.44366447761074,1.38895653772983,0.380508304469197,0.790204397959275,0,0,0,0,1.87467667973554,1.6798212819886,0,0.806026704325635,0.290633938513962,0,0.492663237895943,0.44024217006613,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0.129271715757778,0,0.845302752556,0,1.040074369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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9553 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14487 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=45bp_to_ENST00000472192_5end | |||
|description=CAGE_peak_4_at_MRPL33_5end | |||
|id=chr2:27994656..27994667,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.16e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.31e-15;8!CL:0000081;5.23e-11;11!CL:0000775;5.13e-09;3!CL:1000507;2.91e-08;10!CL:1000494;2.91e-08;10!CL:0000767;3.11e-08;3!CL:0000239;3.35e-08;3!CL:1000615;3.35e-08;3!CL:0002306;3.35e-08;3!CL:0000064;3.78e-08;3!CL:0000067;3.78e-08;3!CL:0005012;3.78e-08;3!CL:0002304;3.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.25e-15,8;CL:0000081,5.07e-11,11;CL:0000775,4.82e-09,3;CL:0000064,1.49e-08,3;CL:0000067,1.49e-08,3;CL:0005012,1.49e-08,3;CL:0002304,1.49e-08,3;CL:0000763,1.51e-08,108;CL:0000049,1.51e-08,108;CL:0000766,2.39e-08,72;CL:1000507,2.43e-08,10;CL:1000494,2.43e-08,10;CL:0000767,3.23e-08,3;CL:0000239,4.03e-08,3;CL:1000615,4.03e-08,3;CL:0002306,4.03e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;2.91e-08;10!UBERON:0009773;2.91e-08;10!UBERON:0001231;2.91e-08;10!UBERON:0004810;2.91e-08;10!UBERON:0006853;3.35e-08;3!UBERON:0007685;3.35e-08;3!UBERON:0004134;3.35e-08;3!UBERON:0001778;3.78e-08;3!UBERON:0001775;3.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.49e-08,3;UBERON:0001775,1.49e-08,3;UBERON:0004810,2.43e-08,10;UBERON:0006853,4.03e-08,3;UBERON:0007685,4.03e-08,3;UBERON:0004134,4.03e-08,3 | |||
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| |||
|short_description=p4@MRPL33 | |||
}} |
Revision as of 18:09, 12 September 2013
Short description: | p4@MRPL33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_MRPL33_5end |
Coexpression cluster: | NA |
Association with transcript: | 45bp_to_ENST00000472192_5end |
EntrezGene: | MRPL33 |
HGNC: | 14487 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.25e-15 | 8 |
blood cell | 5.07e-11 | 11 |
neutrophil | 4.82e-09 | 3 |
ciliated cell | 1.49e-08 | 3 |
ciliated epithelial cell | 1.49e-08 | 3 |
multi-ciliated epithelial cell | 1.49e-08 | 3 |
non-pigmented ciliary epithelial cell | 1.49e-08 | 3 |
myeloid cell | 1.51e-08 | 108 |
common myeloid progenitor | 1.51e-08 | 108 |
myeloid leukocyte | 2.39e-08 | 72 |
kidney tubule cell | 2.43e-08 | 10 |
nephron tubule epithelial cell | 2.43e-08 | 10 |
basophil | 3.23e-08 | 3 |
brush border epithelial cell | 4.03e-08 | 3 |
kidney cortex tubule cell | 4.03e-08 | 3 |
epithelial cell of proximal tubule | 4.03e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.49e-08 | 3 |
ciliary body | 1.49e-08 | 3 |
nephron tubule epithelium | 2.43e-08 | 10 |
renal cortex tubule | 4.03e-08 | 3 |
region of nephron tubule | 4.03e-08 | 3 |
proximal tubule | 4.03e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.