FFCP PHASE1:Mm9::chr11:104304820..104304832,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:104304820..104304832,-|id=chr11:104304820..104304832,-|ontology_enrichment_celltype=CL:0000838!5.32e-08!12;CL:0000791!9.28e-08!9;CL:0000789!9.28e-08!9;CL:0002420!9.28e-08!9;CL:0002419!9.28e-08!9;CL:0000790!9.28e-08!9;CL:0000988!1.52e-07!32;CL:0002032!1.52e-07!32;CL:0000037!1.52e-07!32;CL:0000566!1.52e-07!32;CL:0000837!1.52e-07!32;CL:0000084!2.37e-07!11;CL:0000827!2.37e-07!11;CL:0000542!3.32e-07!13;CL:0000051!3.32e-07!13|ontology_enrichment_celltype_v019_2=CL:0000791,2.03e-29,9;CL:0000789,2.03e-29,9;CL:0002420,2.03e-29,9;CL:0002419,2.03e-29,9;CL:0000790,2.03e-29,9;CL:0000084,4.64e-24,11;CL:0000827,4.64e-24,11;CL:0000624,4.75e-23,8;CL:0002293,1.10e-22,3;CL:0000838,4.77e-22,12;CL:0000542,2.41e-20,13;CL:0000051,2.41e-20,13;CL:0000738,1.60e-15,17;CL:0002087,1.60e-15,17;CL:0000893,1.13e-11,6;CL:0002489,1.13e-11,6;CL:0000898,1.13e-11,6;CL:0000809,1.13e-11,6;CL:0000810,1.13e-11,6;CL:0000895,1.13e-11,6;CL:0000808,1.13e-11,6;CL:0000894,1.13e-11,6;CL:0000806,1.13e-11,6;CL:0000807,1.13e-11,6;CL:0000805,1.13e-11,6;CL:0002425,1.13e-11,6;CL:0002436,1.13e-11,6;CL:0002427,1.13e-11,6;CL:0002428,1.13e-11,6;CL:0002429,1.13e-11,6;CL:0002433,1.13e-11,6;CL:0002431,1.13e-11,6;CL:0002432,1.13e-11,6;CL:0002031,1.73e-10,25;CL:0000625,5.23e-09,1;CL:0000815,1.74e-08,1;CL:0000792,1.74e-08,1;CL:0000988,3.89e-08,32;CL:0002032,3.89e-08,32;CL:0000037,3.89e-08,32;CL:0000837,3.89e-08,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!8.85e-18!48;UBERON:0004177!6.29e-16!29;UBERON:0000072!1.05e-15!27;UBERON:0002370!2.33e-15!23;UBERON:0000974!2.33e-15!23;UBERON:0004807!2.33e-15!23;UBERON:0005058!2.33e-15!23;UBERON:0003351!2.33e-15!23;UBERON:0009113!2.33e-15!23;UBERON:0003295!2.33e-15!23;UBERON:0009722!2.33e-15!23;UBERON:0005562!2.33e-15!23;UBERON:0007690!2.33e-15!23;UBERON:0002390!5.88e-15!45;UBERON:0003061!5.88e-15!45;UBERON:0006562!1.80e-14!24;UBERON:0003408!1.80e-14!24;UBERON:0001557!1.80e-14!24;UBERON:0001042!1.80e-14!24;UBERON:0008814!1.80e-14!24;UBERON:0009145!1.80e-14!24;UBERON:0000063!7.46e-12!35;UBERON:0000065!2.45e-11!41;UBERON:0002405!5.98e-11!70;UBERON:0001004!6.72e-11!42;UBERON:0005057!7.06e-08!51;UBERON:0003081!9.65e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.50e-11,23;UBERON:0000974,2.50e-11,23;UBERON:0004807,2.50e-11,23;UBERON:0005058,2.50e-11,23;UBERON:0003351,2.50e-11,23;UBERON:0009113,2.50e-11,23;UBERON:0003295,2.50e-11,23;UBERON:0009722,2.50e-11,23;UBERON:0005562,2.50e-11,23;UBERON:0007690,2.50e-11,23;UBERON:0006562,7.57e-11,24;UBERON:0003408,7.57e-11,24;UBERON:0001557,7.57e-11,24;UBERON:0001042,7.57e-11,24;UBERON:0008814,7.57e-11,24;UBERON:0009145,7.57e-11,24;UBERON:0000072,1.29e-09,27;UBERON:0004177,6.20e-09,29;UBERON:0005057,6.20e-09,29;UBERON:0000029,1.05e-08,1;UBERON:0001097,1.05e-08,1;UBERON:0003968,1.05e-08,1;UBERON:0001467,1.05e-08,1;UBERON:0000065,2.60e-08,41;UBERON:0001004,4.21e-08,42;UBERON:0000077,2.36e-07,35;UBERON:0007811,3.85e-07,36;UBERON:0002193,4.36e-07,48;UBERON:0002405,4.36e-07,48|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,1.54867594366833,0.468129052643987,0,0,3.42401459862411,2.88487327982691,0.333109761815663,0.202475267389826,0,0.473193248037357,0.685572168028694,0,0.0850432901510698,0.0992909512008853,0,0.319984845586813,0.45881856213434,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0.167782606057736,3.62681071005672,5.04140698713696,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,0,0,0,0.35333957451034,0,1.28326477414318,2.54805239706646,7.11066703153331,0.432982082022428,0.506719730950197,0,0.22836775943812,2.84831672011889,0.445326417194474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0,0.502670417600539,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0.252578877947112,0,0,1.10851914099963,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0.291480836629851,0,0.683483523191411,0,0,0,0.410082683163076,0.457556346413045,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.389762468933385,0.358053391334963,0,0.240390899039938,0.295379054349154,0.201932899896295,0.228620419965,0.403304740547362,0.487289403698762,0.0962118416403295,0.116876902181569,0,0,0.0897138566094757,0,0,0.375364950902364,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr11:104304820..104304832,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:104304820..104304832,- | |||
|id=chr11:104304820..104304832,- | |||
|ontology_enrichment_celltype=CL:0000838!5.32e-08!12;CL:0000791!9.28e-08!9;CL:0000789!9.28e-08!9;CL:0002420!9.28e-08!9;CL:0002419!9.28e-08!9;CL:0000790!9.28e-08!9;CL:0000988!1.52e-07!32;CL:0002032!1.52e-07!32;CL:0000037!1.52e-07!32;CL:0000566!1.52e-07!32;CL:0000837!1.52e-07!32;CL:0000084!2.37e-07!11;CL:0000827!2.37e-07!11;CL:0000542!3.32e-07!13;CL:0000051!3.32e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.03e-29,9;CL:0000789,2.03e-29,9;CL:0002420,2.03e-29,9;CL:0002419,2.03e-29,9;CL:0000790,2.03e-29,9;CL:0000084,4.64e-24,11;CL:0000827,4.64e-24,11;CL:0000624,4.75e-23,8;CL:0002293,1.10e-22,3;CL:0000838,4.77e-22,12;CL:0000542,2.41e-20,13;CL:0000051,2.41e-20,13;CL:0000738,1.60e-15,17;CL:0002087,1.60e-15,17;CL:0000893,1.13e-11,6;CL:0002489,1.13e-11,6;CL:0000898,1.13e-11,6;CL:0000809,1.13e-11,6;CL:0000810,1.13e-11,6;CL:0000895,1.13e-11,6;CL:0000808,1.13e-11,6;CL:0000894,1.13e-11,6;CL:0000806,1.13e-11,6;CL:0000807,1.13e-11,6;CL:0000805,1.13e-11,6;CL:0002425,1.13e-11,6;CL:0002436,1.13e-11,6;CL:0002427,1.13e-11,6;CL:0002428,1.13e-11,6;CL:0002429,1.13e-11,6;CL:0002433,1.13e-11,6;CL:0002431,1.13e-11,6;CL:0002432,1.13e-11,6;CL:0002031,1.73e-10,25;CL:0000625,5.23e-09,1;CL:0000815,1.74e-08,1;CL:0000792,1.74e-08,1;CL:0000988,3.89e-08,32;CL:0002032,3.89e-08,32;CL:0000037,3.89e-08,32;CL:0000837,3.89e-08,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.85e-18!48;UBERON:0004177!6.29e-16!29;UBERON:0000072!1.05e-15!27;UBERON:0002370!2.33e-15!23;UBERON:0000974!2.33e-15!23;UBERON:0004807!2.33e-15!23;UBERON:0005058!2.33e-15!23;UBERON:0003351!2.33e-15!23;UBERON:0009113!2.33e-15!23;UBERON:0003295!2.33e-15!23;UBERON:0009722!2.33e-15!23;UBERON:0005562!2.33e-15!23;UBERON:0007690!2.33e-15!23;UBERON:0002390!5.88e-15!45;UBERON:0003061!5.88e-15!45;UBERON:0006562!1.80e-14!24;UBERON:0003408!1.80e-14!24;UBERON:0001557!1.80e-14!24;UBERON:0001042!1.80e-14!24;UBERON:0008814!1.80e-14!24;UBERON:0009145!1.80e-14!24;UBERON:0000063!7.46e-12!35;UBERON:0000065!2.45e-11!41;UBERON:0002405!5.98e-11!70;UBERON:0001004!6.72e-11!42;UBERON:0005057!7.06e-08!51;UBERON:0003081!9.65e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.50e-11,23;UBERON:0000974,2.50e-11,23;UBERON:0004807,2.50e-11,23;UBERON:0005058,2.50e-11,23;UBERON:0003351,2.50e-11,23;UBERON:0009113,2.50e-11,23;UBERON:0003295,2.50e-11,23;UBERON:0009722,2.50e-11,23;UBERON:0005562,2.50e-11,23;UBERON:0007690,2.50e-11,23;UBERON:0006562,7.57e-11,24;UBERON:0003408,7.57e-11,24;UBERON:0001557,7.57e-11,24;UBERON:0001042,7.57e-11,24;UBERON:0008814,7.57e-11,24;UBERON:0009145,7.57e-11,24;UBERON:0000072,1.29e-09,27;UBERON:0004177,6.20e-09,29;UBERON:0005057,6.20e-09,29;UBERON:0000029,1.05e-08,1;UBERON:0001097,1.05e-08,1;UBERON:0003968,1.05e-08,1;UBERON:0001467,1.05e-08,1;UBERON:0000065,2.60e-08,41;UBERON:0001004,4.21e-08,42;UBERON:0000077,2.36e-07,35;UBERON:0007811,3.85e-07,36;UBERON:0002193,4.36e-07,48;UBERON:0002405,4.36e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,1.54867594366833,0.468129052643987,0,0,3.42401459862411,2.88487327982691,0.333109761815663,0.202475267389826,0,0.473193248037357,0.685572168028694,0,0.0850432901510698,0.0992909512008853,0,0.319984845586813,0.45881856213434,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0.167782606057736,3.62681071005672,5.04140698713696,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,0,0,0,0.35333957451034,0,1.28326477414318,2.54805239706646,7.11066703153331,0.432982082022428,0.506719730950197,0,0.22836775943812,2.84831672011889,0.445326417194474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0,0.502670417600539,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0.252578877947112,0,0,1.10851914099963,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0.291480836629851,0,0.683483523191411,0,0,0,0.410082683163076,0.457556346413045,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.389762468933385,0.358053391334963,0,0.240390899039938,0.295379054349154,0.201932899896295,0.228620419965,0.403304740547362,0.487289403698762,0.0962118416403295,0.116876902181569,0,0,0.0897138566094757,0,0,0.375364950902364,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:104304820..104304832,- | |||
}} |
Revision as of 18:27, 12 September 2013
Short description: | p@chr11:104304820..104304832, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:104304820..104304832, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.50e-11 | 23 |
neck | 2.50e-11 | 23 |
respiratory system epithelium | 2.50e-11 | 23 |
hemolymphoid system gland | 2.50e-11 | 23 |
pharyngeal epithelium | 2.50e-11 | 23 |
thymic region | 2.50e-11 | 23 |
pharyngeal gland | 2.50e-11 | 23 |
entire pharyngeal arch endoderm | 2.50e-11 | 23 |
thymus primordium | 2.50e-11 | 23 |
early pharyngeal endoderm | 2.50e-11 | 23 |
pharynx | 7.57e-11 | 24 |
gland of gut | 7.57e-11 | 24 |
upper respiratory tract | 7.57e-11 | 24 |
chordate pharynx | 7.57e-11 | 24 |
pharyngeal arch system | 7.57e-11 | 24 |
pharyngeal region of foregut | 7.57e-11 | 24 |
segment of respiratory tract | 1.29e-09 | 27 |
hemopoietic organ | 6.20e-09 | 29 |
immune organ | 6.20e-09 | 29 |
lymph node | 1.05e-08 | 1 |
axillary lymph node | 1.05e-08 | 1 |
peripheral lymph node | 1.05e-08 | 1 |
shoulder | 1.05e-08 | 1 |
respiratory tract | 2.60e-08 | 41 |
respiratory system | 4.21e-08 | 42 |
mixed endoderm/mesoderm-derived structure | 2.36e-07 | 35 |
craniocervical region | 3.85e-07 | 36 |
hemolymphoid system | 4.36e-07 | 48 |
immune system | 4.36e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.