FFCP PHASE1:Mm9::chr11:109287074..109287084,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=29|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:109287074..109287084,-|id=chr11:109287074..109287084,-|ontology_enrichment_celltype=CL:0000624!1.89e-21!8;CL:0000838!3.72e-19!12;CL:0000791!5.04e-19!9;CL:0000789!5.04e-19!9;CL:0002420!5.04e-19!9;CL:0002419!5.04e-19!9;CL:0000790!5.04e-19!9;CL:0000542!1.25e-17!13;CL:0000051!1.25e-17!13;CL:0000084!1.72e-15!11;CL:0000827!1.72e-15!11;CL:0000738!2.60e-13!17;CL:0002087!2.60e-13!17;CL:0000893!6.78e-13!6;CL:0002489!6.78e-13!6;CL:0000898!6.78e-13!6;CL:0000809!6.78e-13!6;CL:0000810!6.78e-13!6;CL:0000895!6.78e-13!6;CL:0000808!6.78e-13!6;CL:0000894!6.78e-13!6;CL:0000806!6.78e-13!6;CL:0000807!6.78e-13!6;CL:0000805!6.78e-13!6;CL:0002425!6.78e-13!6;CL:0002436!6.78e-13!6;CL:0002427!6.78e-13!6;CL:0002428!6.78e-13!6;CL:0002429!6.78e-13!6;CL:0002433!6.78e-13!6;CL:0002431!6.78e-13!6;CL:0002432!6.78e-13!6;CL:0002031!1.96e-11!25;CL:0000988!5.57e-11!32;CL:0002032!5.57e-11!32;CL:0000037!5.57e-11!32;CL:0000566!5.57e-11!32;CL:0000837!5.57e-11!32;CL:0000219!4.81e-09!54;CL:0002320!5.48e-09!46;CL:0000134!5.48e-09!46;CL:0000063!4.09e-07!66|ontology_enrichment_celltype_v019_2=CL:0000624,2.45e-33,8;CL:0000815,2.87e-30,1;CL:0000792,2.87e-30,1;CL:0000791,8.84e-30,9;CL:0000789,8.84e-30,9;CL:0002420,8.84e-30,9;CL:0002419,8.84e-30,9;CL:0000790,8.84e-30,9;CL:0000084,1.34e-24,11;CL:0000827,1.34e-24,11;CL:0000838,1.18e-22,12;CL:0000542,5.26e-21,13;CL:0000051,5.26e-21,13;CL:0000738,2.41e-16,17;CL:0002087,2.41e-16,17;CL:0002031,1.80e-11,25;CL:0000988,3.42e-09,32;CL:0002032,3.42e-09,32;CL:0000037,3.42e-09,32;CL:0000837,3.42e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000063!1.86e-09!35;UBERON:0002370!3.48e-09!23;UBERON:0000974!3.48e-09!23;UBERON:0004807!3.48e-09!23;UBERON:0005058!3.48e-09!23;UBERON:0003351!3.48e-09!23;UBERON:0009113!3.48e-09!23;UBERON:0003295!3.48e-09!23;UBERON:0009722!3.48e-09!23;UBERON:0005562!3.48e-09!23;UBERON:0007690!3.48e-09!23;UBERON:0002384!5.48e-09!46;UBERON:0006562!9.00e-09!24;UBERON:0003408!9.00e-09!24;UBERON:0001557!9.00e-09!24;UBERON:0001042!9.00e-09!24;UBERON:0008814!9.00e-09!24;UBERON:0009145!9.00e-09!24;UBERON:0000072!1.02e-07!27;UBERON:0002390!3.77e-07!45;UBERON:0003061!3.77e-07!45;UBERON:0004177!3.93e-07!29|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0.30246421130683,0,0,0,4.9066862907799,0,0.234064526321993,0,0.0797721589953364,0.684802919724823,3.05971408466491,0,0,0,0.315462165358238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0.335565212115473,2.90144856804538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:109287074..109287084,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=29 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:109287074..109287084,- | |||
|id=chr11:109287074..109287084,- | |||
|ontology_enrichment_celltype=CL:0000624!1.89e-21!8;CL:0000838!3.72e-19!12;CL:0000791!5.04e-19!9;CL:0000789!5.04e-19!9;CL:0002420!5.04e-19!9;CL:0002419!5.04e-19!9;CL:0000790!5.04e-19!9;CL:0000542!1.25e-17!13;CL:0000051!1.25e-17!13;CL:0000084!1.72e-15!11;CL:0000827!1.72e-15!11;CL:0000738!2.60e-13!17;CL:0002087!2.60e-13!17;CL:0000893!6.78e-13!6;CL:0002489!6.78e-13!6;CL:0000898!6.78e-13!6;CL:0000809!6.78e-13!6;CL:0000810!6.78e-13!6;CL:0000895!6.78e-13!6;CL:0000808!6.78e-13!6;CL:0000894!6.78e-13!6;CL:0000806!6.78e-13!6;CL:0000807!6.78e-13!6;CL:0000805!6.78e-13!6;CL:0002425!6.78e-13!6;CL:0002436!6.78e-13!6;CL:0002427!6.78e-13!6;CL:0002428!6.78e-13!6;CL:0002429!6.78e-13!6;CL:0002433!6.78e-13!6;CL:0002431!6.78e-13!6;CL:0002432!6.78e-13!6;CL:0002031!1.96e-11!25;CL:0000988!5.57e-11!32;CL:0002032!5.57e-11!32;CL:0000037!5.57e-11!32;CL:0000566!5.57e-11!32;CL:0000837!5.57e-11!32;CL:0000219!4.81e-09!54;CL:0002320!5.48e-09!46;CL:0000134!5.48e-09!46;CL:0000063!4.09e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.45e-33,8;CL:0000815,2.87e-30,1;CL:0000792,2.87e-30,1;CL:0000791,8.84e-30,9;CL:0000789,8.84e-30,9;CL:0002420,8.84e-30,9;CL:0002419,8.84e-30,9;CL:0000790,8.84e-30,9;CL:0000084,1.34e-24,11;CL:0000827,1.34e-24,11;CL:0000838,1.18e-22,12;CL:0000542,5.26e-21,13;CL:0000051,5.26e-21,13;CL:0000738,2.41e-16,17;CL:0002087,2.41e-16,17;CL:0002031,1.80e-11,25;CL:0000988,3.42e-09,32;CL:0002032,3.42e-09,32;CL:0000037,3.42e-09,32;CL:0000837,3.42e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000063!1.86e-09!35;UBERON:0002370!3.48e-09!23;UBERON:0000974!3.48e-09!23;UBERON:0004807!3.48e-09!23;UBERON:0005058!3.48e-09!23;UBERON:0003351!3.48e-09!23;UBERON:0009113!3.48e-09!23;UBERON:0003295!3.48e-09!23;UBERON:0009722!3.48e-09!23;UBERON:0005562!3.48e-09!23;UBERON:0007690!3.48e-09!23;UBERON:0002384!5.48e-09!46;UBERON:0006562!9.00e-09!24;UBERON:0003408!9.00e-09!24;UBERON:0001557!9.00e-09!24;UBERON:0001042!9.00e-09!24;UBERON:0008814!9.00e-09!24;UBERON:0009145!9.00e-09!24;UBERON:0000072!1.02e-07!27;UBERON:0002390!3.77e-07!45;UBERON:0003061!3.77e-07!45;UBERON:0004177!3.93e-07!29 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,4.9066862907799,0,0.234064526321993,0,0.0797721589953364,0.684802919724823,3.05971408466491,0,0,0,0.315462165358238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0.335565212115473,2.90144856804538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:109287074..109287084,- | |||
}} |
Revision as of 18:38, 12 September 2013
Short description: | p@chr11:109287074..109287084, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:109287074..109287084, - |
Coexpression cluster: | MCL_coexpression_mm9:29 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.45e-33 | 8 |
regulatory T cell | 2.87e-30 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.87e-30 | 1 |
mature alpha-beta T cell | 8.84e-30 | 9 |
alpha-beta T cell | 8.84e-30 | 9 |
immature T cell | 8.84e-30 | 9 |
mature T cell | 8.84e-30 | 9 |
immature alpha-beta T cell | 8.84e-30 | 9 |
T cell | 1.34e-24 | 11 |
pro-T cell | 1.34e-24 | 11 |
lymphoid lineage restricted progenitor cell | 1.18e-22 | 12 |
lymphocyte | 5.26e-21 | 13 |
common lymphoid progenitor | 5.26e-21 | 13 |
leukocyte | 2.41e-16 | 17 |
nongranular leukocyte | 2.41e-16 | 17 |
hematopoietic lineage restricted progenitor cell | 1.80e-11 | 25 |
hematopoietic cell | 3.42e-09 | 32 |
hematopoietic oligopotent progenitor cell | 3.42e-09 | 32 |
hematopoietic stem cell | 3.42e-09 | 32 |
hematopoietic multipotent progenitor cell | 3.42e-09 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.