FFCP PHASE1:Mm9::chr11:119903064..119903081,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11302|HGNC=|MCL_coexpression_id=3|UniProt=B1AZF9,Q80YE4|association_with_transcript=13bp_to_NM_001198787,uc007mrl.2_5end|description=CAGE_peak_7_at_Aatk_5end|id=chr11:119903064..119903081,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000557,2.72e-09,7;CL:0002092,3.31e-09,3;CL:0002540,3.31e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.47e-09,3;DOID:4045,1.47e-09,3|ontology_enrichment_uberon=UBERON:0009569!2.93e-08!66;UBERON:0005172!5.67e-07!49;UBERON:0005173!5.67e-07!49;UBERON:0002417!5.67e-07!49;UBERON:0000916!5.67e-07!49;UBERON:0001474!6.64e-07!22;UBERON:0004765!6.64e-07!22;UBERON:0001434!6.64e-07!22;UBERON:0002204!8.49e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002204,9.30e-14,32;UBERON:0001474,1.42e-12,22;UBERON:0004765,1.42e-12,22;UBERON:0001434,1.42e-12,22;UBERON:0002048,6.40e-10,14;UBERON:0000117,6.40e-10,14;UBERON:0000171,6.40e-10,14;UBERON:0000170,6.40e-10,14;UBERON:0005597,6.40e-10,14;UBERON:0000118,6.40e-10,14;UBERON:0002371,1.11e-09,16;UBERON:0005153,5.88e-08,17;UBERON:0005178,5.88e-08,17;UBERON:0005181,5.88e-08,17;UBERON:0002224,5.88e-08,17;UBERON:0000915,5.88e-08,17;UBERON:0008947,5.88e-08,17;UBERON:0003258,5.88e-08,17|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0.315462165358238,0.137114433605739,0.42438965179803,0.255129870453209,0.297872853602656,1.04479915655574,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,24.2748345827406,14.8453715459522,19.3703785270305,45.2938245783881,21.8574555186703,22.3334762394331,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0.257259436035947,0.286533439938757,0,0,0,0,0,0,5.39939830368839,4.94433181283487,7.104801149461,1.49800055259202,0,0,0.135005938331691,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0.227178579999552,0.0755715601067855,4.05810284182349,0.860423876981386,0,0.539703191637817,0.649776417447669,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0.742210695324124,0,0.304465478312141,0.230615497256059,0,0.352766121407114,0.125666591329675,0.247194967734374,0.578397427679647,2.65383165584962,0.647067399789637,1.32504911076236,1.45462575940567,0,0.292780797011547,0.209446706813455,0,0.359445373517761,0,0.127070227073065,0.299581278809645,0,0,0,0.255715457330331,0,0.162241263067758,0.101839363850316,1.49288364732112,0,0.420883711772948,0,0,0,0,0.204109497453984,0,0.0937017245597288,0,0,0,0,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,0,2.1066395619397,1.28673953557358,0.568326998791185,0,0,0.180062061461015,0,0,0.154267112887378,0,0.804820204198858,0,0,0,0.324275238183423,0.730999937126662,0.219550115291051,0.268412837520744,0.210289948564127,0,0,0.264450566663544,0,0,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0,0.19496408711912,0.898819408654221,0,0.398282546508734,0,0.114248512609729,0,0,0.387904974335251,0.140271639780637,0.505892296994058,0.590440591918409,0.31399745568275,0.246794327843601,0.592905254174298,0,0,0.224862112384854,0.405720242777006,0.72353147925725,0.25462585178142,2.30156909960649,1.62135226775035,0.274561413188081,0,0.372140947668503,0.624075346229121,0.505157755894224,0.179397413521912,0.964887042726734,1.29327233116623,0,0,0,0,0.502518772325447,0.238043640886014,1.17080188714679,1.10344600874334,1.32878813789265,1.43509291791738,1.96635977658886,1.20879487306127,1.88043776155965,3.01582567878545,6.52686820582452,0,0.275936746304732,0.481651769963376,0.234423373184406,0,0.252470927204373,0,0,0,0.238968797952552,0.445597348164788,0.566153061577665,0,0,0.395287777946524,0,0,0,0,0,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0,0,0.316036757935816,1.05418608574999,0,0,0,0.258717367565509,0,0,0.178368817602071,0,0.304464949114599,0.469343416127421,0.21183207086382,0,0.49465875882444,0,0.0603129249281559,0,0,0,0.556275906031529,2.05045056957423,1.23832120777933,1.66675074632741,0.753473828018764,0.956859594047176,0.457556346413045,0.339956859987711,0.139951452323658,0,0.954670618015114,0,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0.330613822901344,0,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0.202725215290164,0,0,0.179026695667481,0,0.120195449519969,0.443068581523732,0.100966449948148,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0.572895513439397,0,0,0.755393897389701,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.280924522409647,0.192075457214608,0.459483751644906,0.952587382566147,0.231768651889711,0.192909220463705,0,0.294397840268795,0.685738504770831,0,0,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0,0,0,0,0.492522411877817,0.818462086339379,0.309873682371932,0.385813221962283,0,0.233931608445408,0.214871054048298,0.191288332068843,0.882365676478062,0.463735671240843|short_description=p7@Aatk}} | ||
|EntrezGene=11302 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=B1AZF9,Q80YE4 | |||
|association_with_transcript=13bp_to_NM_001198787,uc007mrl.2_5end | |||
|description=CAGE_peak_7_at_Aatk_5end | |||
|id=chr11:119903064..119903081,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,2.72e-09,7;CL:0002092,3.31e-09,3;CL:0002540,3.31e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.47e-09,3;DOID:4045,1.47e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0009569!2.93e-08!66;UBERON:0005172!5.67e-07!49;UBERON:0005173!5.67e-07!49;UBERON:0002417!5.67e-07!49;UBERON:0000916!5.67e-07!49;UBERON:0001474!6.64e-07!22;UBERON:0004765!6.64e-07!22;UBERON:0001434!6.64e-07!22;UBERON:0002204!8.49e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,9.30e-14,32;UBERON:0001474,1.42e-12,22;UBERON:0004765,1.42e-12,22;UBERON:0001434,1.42e-12,22;UBERON:0002048,6.40e-10,14;UBERON:0000117,6.40e-10,14;UBERON:0000171,6.40e-10,14;UBERON:0000170,6.40e-10,14;UBERON:0005597,6.40e-10,14;UBERON:0000118,6.40e-10,14;UBERON:0002371,1.11e-09,16;UBERON:0005153,5.88e-08,17;UBERON:0005178,5.88e-08,17;UBERON:0005181,5.88e-08,17;UBERON:0002224,5.88e-08,17;UBERON:0000915,5.88e-08,17;UBERON:0008947,5.88e-08,17;UBERON:0003258,5.88e-08,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0.315462165358238,0.137114433605739,0.42438965179803,0.255129870453209,0.297872853602656,1.04479915655574,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,24.2748345827406,14.8453715459522,19.3703785270305,45.2938245783881,21.8574555186703,22.3334762394331,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0.257259436035947,0.286533439938757,0,0,0,0,0,0,5.39939830368839,4.94433181283487,7.104801149461,1.49800055259202,0,0,0.135005938331691,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0.227178579999552,0.0755715601067855,4.05810284182349,0.860423876981386,0,0.539703191637817,0.649776417447669,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0.742210695324124,0,0.304465478312141,0.230615497256059,0,0.352766121407114,0.125666591329675,0.247194967734374,0.578397427679647,2.65383165584962,0.647067399789637,1.32504911076236,1.45462575940567,0,0.292780797011547,0.209446706813455,0,0.359445373517761,0,0.127070227073065,0.299581278809645,0,0,0,0.255715457330331,0,0.162241263067758,0.101839363850316,1.49288364732112,0,0.420883711772948,0,0,0,0,0.204109497453984,0,0.0937017245597288,0,0,0,0,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,0,2.1066395619397,1.28673953557358,0.568326998791185,0,0,0.180062061461015,0,0,0.154267112887378,0,0.804820204198858,0,0,0,0.324275238183423,0.730999937126662,0.219550115291051,0.268412837520744,0.210289948564127,0,0,0.264450566663544,0,0,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0,0.19496408711912,0.898819408654221,0,0.398282546508734,0,0.114248512609729,0,0,0.387904974335251,0.140271639780637,0.505892296994058,0.590440591918409,0.31399745568275,0.246794327843601,0.592905254174298,0,0,0.224862112384854,0.405720242777006,0.72353147925725,0.25462585178142,2.30156909960649,1.62135226775035,0.274561413188081,0,0.372140947668503,0.624075346229121,0.505157755894224,0.179397413521912,0.964887042726734,1.29327233116623,0,0,0,0,0.502518772325447,0.238043640886014,1.17080188714679,1.10344600874334,1.32878813789265,1.43509291791738,1.96635977658886,1.20879487306127,1.88043776155965,3.01582567878545,6.52686820582452,0,0.275936746304732,0.481651769963376,0.234423373184406,0,0.252470927204373,0,0,0,0.238968797952552,0.445597348164788,0.566153061577665,0,0,0.395287777946524,0,0,0,0,0,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0,0,0.316036757935816,1.05418608574999,0,0,0,0.258717367565509,0,0,0.178368817602071,0,0.304464949114599,0.469343416127421,0.21183207086382,0,0.49465875882444,0,0.0603129249281559,0,0,0,0.556275906031529,2.05045056957423,1.23832120777933,1.66675074632741,0.753473828018764,0.956859594047176,0.457556346413045,0.339956859987711,0.139951452323658,0,0.954670618015114,0,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0.330613822901344,0,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0.202725215290164,0,0,0.179026695667481,0,0.120195449519969,0.443068581523732,0.100966449948148,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0.572895513439397,0,0,0.755393897389701,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.280924522409647,0.192075457214608,0.459483751644906,0.952587382566147,0.231768651889711,0.192909220463705,0,0.294397840268795,0.685738504770831,0,0,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0,0,0,0,0.492522411877817,0.818462086339379,0.309873682371932,0.385813221962283,0,0.233931608445408,0.214871054048298,0.191288332068843,0.882365676478062,0.463735671240843 | |||
|short_description=p7@Aatk | |||
}} |
Revision as of 19:04, 12 September 2013
Short description: | p7@Aatk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Aatk_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 13bp_to_NM_001198787, uc007mrl.2_5end |
EntrezGene: | Aatk |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 2.72e-09 | 7 |
bone marrow cell | 3.31e-09 | 3 |
mesenchymal stem cell of the bone marrow | 3.31e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 9.30e-14 | 32 |
bone element | 1.42e-12 | 22 |
skeletal element | 1.42e-12 | 22 |
skeletal system | 1.42e-12 | 22 |
lung | 6.40e-10 | 14 |
respiratory tube | 6.40e-10 | 14 |
respiration organ | 6.40e-10 | 14 |
pair of lungs | 6.40e-10 | 14 |
lung primordium | 6.40e-10 | 14 |
lung bud | 6.40e-10 | 14 |
bone marrow | 1.11e-09 | 16 |
epithelial bud | 5.88e-08 | 17 |
thoracic cavity element | 5.88e-08 | 17 |
thoracic segment organ | 5.88e-08 | 17 |
thoracic cavity | 5.88e-08 | 17 |
thoracic segment of trunk | 5.88e-08 | 17 |
respiratory primordium | 5.88e-08 | 17 |
endoderm of foregut | 5.88e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.47e-09 | 3 |
muscle cancer | 1.47e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.