FFCP PHASE1:Mm9::chr11:3005053..3005065,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=233|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:3005053..3005065,+|id=chr11:3005053..3005065,+|ontology_enrichment_celltype=CL:0000791!5.44e-39!9;CL:0000789!5.44e-39!9;CL:0002420!5.44e-39!9;CL:0002419!5.44e-39!9;CL:0000790!5.44e-39!9;CL:0000838!2.25e-35!12;CL:0000624!6.49e-35!8;CL:0000542!1.54e-32!13;CL:0000051!1.54e-32!13;CL:0000084!1.12e-31!11;CL:0000827!1.12e-31!11;CL:0000893!1.10e-26!6;CL:0002489!1.10e-26!6;CL:0000898!1.10e-26!6;CL:0000809!1.10e-26!6;CL:0000810!1.10e-26!6;CL:0000895!1.10e-26!6;CL:0000808!1.10e-26!6;CL:0000894!1.10e-26!6;CL:0000806!1.10e-26!6;CL:0000807!1.10e-26!6;CL:0000805!1.10e-26!6;CL:0002425!1.10e-26!6;CL:0002436!1.10e-26!6;CL:0002427!1.10e-26!6;CL:0002428!1.10e-26!6;CL:0002429!1.10e-26!6;CL:0002433!1.10e-26!6;CL:0002431!1.10e-26!6;CL:0002432!1.10e-26!6;CL:0000738!1.57e-24!17;CL:0002087!1.57e-24!17;CL:0002031!4.29e-23!25;CL:0000988!1.30e-17!32;CL:0002032!1.30e-17!32;CL:0000037!1.30e-17!32;CL:0000566!1.30e-17!32;CL:0000837!1.30e-17!32;CL:0002320!1.22e-11!46;CL:0000134!1.22e-11!46;CL:0000219!1.29e-09!54;CL:0000063!1.70e-07!66;CL:0000034!1.87e-07!97;CL:0000723!5.85e-07!91;CL:0000048!5.85e-07!91|ontology_enrichment_celltype_v019_2=CL:0000791,1.77e-60,9;CL:0000789,1.77e-60,9;CL:0002420,1.77e-60,9;CL:0002419,1.77e-60,9;CL:0000790,1.77e-60,9;CL:0000624,4.82e-54,8;CL:0000084,2.20e-49,11;CL:0000827,2.20e-49,11;CL:0000838,3.19e-45,12;CL:0000542,1.07e-41,13;CL:0000051,1.07e-41,13;CL:0000893,4.64e-41,6;CL:0002489,4.64e-41,6;CL:0000898,4.64e-41,6;CL:0000809,4.64e-41,6;CL:0000810,4.64e-41,6;CL:0000895,4.64e-41,6;CL:0000808,4.64e-41,6;CL:0000894,4.64e-41,6;CL:0000806,4.64e-41,6;CL:0000807,4.64e-41,6;CL:0000805,4.64e-41,6;CL:0002425,4.64e-41,6;CL:0002436,4.64e-41,6;CL:0002427,4.64e-41,6;CL:0002428,4.64e-41,6;CL:0002429,4.64e-41,6;CL:0002433,4.64e-41,6;CL:0002431,4.64e-41,6;CL:0002432,4.64e-41,6;CL:0000738,9.69e-32,17;CL:0002087,9.69e-32,17;CL:0002031,2.33e-21,25;CL:0000988,1.61e-16,32;CL:0002032,1.61e-16,32;CL:0000037,1.61e-16,32;CL:0000837,1.61e-16,32;CL:0002320,3.09e-11,46;CL:0000134,3.09e-11,46;CL:0000219,1.94e-09,54;CL:0000625,5.62e-08,1;CL:0000723,6.32e-08,91;CL:0000048,6.32e-08,91;CL:0000815,6.57e-08,1;CL:0000792,6.57e-08,1;CL:0000034,2.33e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.40e-09,3;DOID:4045,1.40e-09,3|ontology_enrichment_uberon=UBERON:0002384!1.22e-11!46;UBERON:0002370!3.46e-11!23;UBERON:0000974!3.46e-11!23;UBERON:0004807!3.46e-11!23;UBERON:0005058!3.46e-11!23;UBERON:0003351!3.46e-11!23;UBERON:0009113!3.46e-11!23;UBERON:0003295!3.46e-11!23;UBERON:0009722!3.46e-11!23;UBERON:0005562!3.46e-11!23;UBERON:0007690!3.46e-11!23;UBERON:0004177!7.65e-11!29;UBERON:0006562!1.12e-10!24;UBERON:0003408!1.12e-10!24;UBERON:0001557!1.12e-10!24;UBERON:0001042!1.12e-10!24;UBERON:0008814!1.12e-10!24;UBERON:0009145!1.12e-10!24;UBERON:0002390!9.90e-10!45;UBERON:0003061!9.90e-10!45;UBERON:0000072!2.28e-09!27;UBERON:0002193!5.20e-09!48;UBERON:0000063!5.61e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.09e-11,46;UBERON:0002370,1.43e-10,23;UBERON:0000974,1.43e-10,23;UBERON:0004807,1.43e-10,23;UBERON:0005058,1.43e-10,23;UBERON:0003351,1.43e-10,23;UBERON:0009113,1.43e-10,23;UBERON:0003295,1.43e-10,23;UBERON:0009722,1.43e-10,23;UBERON:0005562,1.43e-10,23;UBERON:0007690,1.43e-10,23;UBERON:0006562,4.06e-10,24;UBERON:0003408,4.06e-10,24;UBERON:0001557,4.06e-10,24;UBERON:0001042,4.06e-10,24;UBERON:0008814,4.06e-10,24;UBERON:0009145,4.06e-10,24;UBERON:0000072,5.84e-09,27;UBERON:0004177,2.55e-08,29;UBERON:0005057,2.55e-08,29;UBERON:0000077,7.81e-07,35|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,6.75785866328,4.21316147379588,3.5955773327356,1.51567102091139,7.87523357683546,1.04904482902797,0,0,0,0,0.137114433605739,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,0,1.0470474879476,4.1176204162171,0.683045484958446,2.42755176515577,0,0,0,0,0,0,0,0,0,0.335565212115473,3.62681071005672,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0,0,0,0,0,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:3005053..3005065,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=233 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:3005053..3005065,+ | |||
|id=chr11:3005053..3005065,+ | |||
|ontology_enrichment_celltype=CL:0000791!5.44e-39!9;CL:0000789!5.44e-39!9;CL:0002420!5.44e-39!9;CL:0002419!5.44e-39!9;CL:0000790!5.44e-39!9;CL:0000838!2.25e-35!12;CL:0000624!6.49e-35!8;CL:0000542!1.54e-32!13;CL:0000051!1.54e-32!13;CL:0000084!1.12e-31!11;CL:0000827!1.12e-31!11;CL:0000893!1.10e-26!6;CL:0002489!1.10e-26!6;CL:0000898!1.10e-26!6;CL:0000809!1.10e-26!6;CL:0000810!1.10e-26!6;CL:0000895!1.10e-26!6;CL:0000808!1.10e-26!6;CL:0000894!1.10e-26!6;CL:0000806!1.10e-26!6;CL:0000807!1.10e-26!6;CL:0000805!1.10e-26!6;CL:0002425!1.10e-26!6;CL:0002436!1.10e-26!6;CL:0002427!1.10e-26!6;CL:0002428!1.10e-26!6;CL:0002429!1.10e-26!6;CL:0002433!1.10e-26!6;CL:0002431!1.10e-26!6;CL:0002432!1.10e-26!6;CL:0000738!1.57e-24!17;CL:0002087!1.57e-24!17;CL:0002031!4.29e-23!25;CL:0000988!1.30e-17!32;CL:0002032!1.30e-17!32;CL:0000037!1.30e-17!32;CL:0000566!1.30e-17!32;CL:0000837!1.30e-17!32;CL:0002320!1.22e-11!46;CL:0000134!1.22e-11!46;CL:0000219!1.29e-09!54;CL:0000063!1.70e-07!66;CL:0000034!1.87e-07!97;CL:0000723!5.85e-07!91;CL:0000048!5.85e-07!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.77e-60,9;CL:0000789,1.77e-60,9;CL:0002420,1.77e-60,9;CL:0002419,1.77e-60,9;CL:0000790,1.77e-60,9;CL:0000624,4.82e-54,8;CL:0000084,2.20e-49,11;CL:0000827,2.20e-49,11;CL:0000838,3.19e-45,12;CL:0000542,1.07e-41,13;CL:0000051,1.07e-41,13;CL:0000893,4.64e-41,6;CL:0002489,4.64e-41,6;CL:0000898,4.64e-41,6;CL:0000809,4.64e-41,6;CL:0000810,4.64e-41,6;CL:0000895,4.64e-41,6;CL:0000808,4.64e-41,6;CL:0000894,4.64e-41,6;CL:0000806,4.64e-41,6;CL:0000807,4.64e-41,6;CL:0000805,4.64e-41,6;CL:0002425,4.64e-41,6;CL:0002436,4.64e-41,6;CL:0002427,4.64e-41,6;CL:0002428,4.64e-41,6;CL:0002429,4.64e-41,6;CL:0002433,4.64e-41,6;CL:0002431,4.64e-41,6;CL:0002432,4.64e-41,6;CL:0000738,9.69e-32,17;CL:0002087,9.69e-32,17;CL:0002031,2.33e-21,25;CL:0000988,1.61e-16,32;CL:0002032,1.61e-16,32;CL:0000037,1.61e-16,32;CL:0000837,1.61e-16,32;CL:0002320,3.09e-11,46;CL:0000134,3.09e-11,46;CL:0000219,1.94e-09,54;CL:0000625,5.62e-08,1;CL:0000723,6.32e-08,91;CL:0000048,6.32e-08,91;CL:0000815,6.57e-08,1;CL:0000792,6.57e-08,1;CL:0000034,2.33e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.40e-09,3;DOID:4045,1.40e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.22e-11!46;UBERON:0002370!3.46e-11!23;UBERON:0000974!3.46e-11!23;UBERON:0004807!3.46e-11!23;UBERON:0005058!3.46e-11!23;UBERON:0003351!3.46e-11!23;UBERON:0009113!3.46e-11!23;UBERON:0003295!3.46e-11!23;UBERON:0009722!3.46e-11!23;UBERON:0005562!3.46e-11!23;UBERON:0007690!3.46e-11!23;UBERON:0004177!7.65e-11!29;UBERON:0006562!1.12e-10!24;UBERON:0003408!1.12e-10!24;UBERON:0001557!1.12e-10!24;UBERON:0001042!1.12e-10!24;UBERON:0008814!1.12e-10!24;UBERON:0009145!1.12e-10!24;UBERON:0002390!9.90e-10!45;UBERON:0003061!9.90e-10!45;UBERON:0000072!2.28e-09!27;UBERON:0002193!5.20e-09!48;UBERON:0000063!5.61e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.09e-11,46;UBERON:0002370,1.43e-10,23;UBERON:0000974,1.43e-10,23;UBERON:0004807,1.43e-10,23;UBERON:0005058,1.43e-10,23;UBERON:0003351,1.43e-10,23;UBERON:0009113,1.43e-10,23;UBERON:0003295,1.43e-10,23;UBERON:0009722,1.43e-10,23;UBERON:0005562,1.43e-10,23;UBERON:0007690,1.43e-10,23;UBERON:0006562,4.06e-10,24;UBERON:0003408,4.06e-10,24;UBERON:0001557,4.06e-10,24;UBERON:0001042,4.06e-10,24;UBERON:0008814,4.06e-10,24;UBERON:0009145,4.06e-10,24;UBERON:0000072,5.84e-09,27;UBERON:0004177,2.55e-08,29;UBERON:0005057,2.55e-08,29;UBERON:0000077,7.81e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,6.75785866328,4.21316147379588,3.5955773327356,1.51567102091139,7.87523357683546,1.04904482902797,0,0,0,0,0.137114433605739,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,0,1.0470474879476,4.1176204162171,0.683045484958446,2.42755176515577,0,0,0,0,0,0,0,0,0,0.335565212115473,3.62681071005672,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0,0,0,0,0,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:3005053..3005065,+ | |||
}} |
Revision as of 19:22, 12 September 2013
Short description: | p@chr11:3005053..3005065, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:3005053..3005065, + |
Coexpression cluster: | MCL_coexpression_mm9:233 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.09e-11 | 46 |
thymus | 1.43e-10 | 23 |
neck | 1.43e-10 | 23 |
respiratory system epithelium | 1.43e-10 | 23 |
hemolymphoid system gland | 1.43e-10 | 23 |
pharyngeal epithelium | 1.43e-10 | 23 |
thymic region | 1.43e-10 | 23 |
pharyngeal gland | 1.43e-10 | 23 |
entire pharyngeal arch endoderm | 1.43e-10 | 23 |
thymus primordium | 1.43e-10 | 23 |
early pharyngeal endoderm | 1.43e-10 | 23 |
pharynx | 4.06e-10 | 24 |
gland of gut | 4.06e-10 | 24 |
upper respiratory tract | 4.06e-10 | 24 |
chordate pharynx | 4.06e-10 | 24 |
pharyngeal arch system | 4.06e-10 | 24 |
pharyngeal region of foregut | 4.06e-10 | 24 |
segment of respiratory tract | 5.84e-09 | 27 |
hemopoietic organ | 2.55e-08 | 29 |
immune organ | 2.55e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 7.81e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.40e-09 | 3 |
muscle cancer | 1.40e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.