FFCP PHASE1:Mm9::chr11:33863281..33863297,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16533|HGNC=|MCL_coexpression_id=1284|UniProt=Q5SQK1,Q8CAE3|association_with_transcript=268bp_to_ENSMUST00000020362,NM_031169,uc007iks.2_5end|description=CAGE_peak_1_at_Kcnmb1_5end|id=chr11:33863281..33863297,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!8.83e-10!18;UBERON:0000948!8.83e-10!18;UBERON:0005498!8.83e-10!18;UBERON:0004140!8.83e-10!18;UBERON:0009881!8.83e-10!18;UBERON:0004141!8.83e-10!18;UBERON:0003084!8.83e-10!18;UBERON:0007005!8.83e-10!18;UBERON:0004139!8.83e-10!18;UBERON:0004291!8.83e-10!18;UBERON:0003103!2.46e-09!43;UBERON:0004535!3.35e-08!23;UBERON:0001009!3.35e-08!23;UBERON:0004872!1.45e-07!33;UBERON:0005153!3.76e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.59e-13,18;UBERON:0000948,1.59e-13,18;UBERON:0005498,1.59e-13,18;UBERON:0004140,1.59e-13,18;UBERON:0009881,1.59e-13,18;UBERON:0004141,1.59e-13,18;UBERON:0003084,1.59e-13,18;UBERON:0007005,1.59e-13,18;UBERON:0004139,1.59e-13,18;UBERON:0004291,1.59e-13,18;UBERON:0004535,9.51e-13,23;UBERON:0001009,9.51e-13,23;UBERON:0005409,1.03e-09,47;UBERON:0003103,2.32e-09,43;UBERON:0004872,7.86e-09,33;UBERON:0005153,3.42e-08,17|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,2.82985379639542,3.43840127926508,4.12537673821954,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,1.15265491596466,0.103689612308478,0,0,0.285650984403804,0.441737081903227,0.244981598429908,0.0958454710182364,0,1.10115880999389,0.255374676170375,0,0.131886287730194,0,0.52091337055676,0.558365998002762,0.56276261003168,0.916789486660861,0.294628585473668,0.142371680799103,0.186399445825301,0,0,3.76823835312181,1.72084775396277,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.91347103775248,0.258937883647172,0.148442139064825,0,0,0,0,0.352766121407114,0.376999773989026,1.73036477414062,33.6916501623394,0.884610551949874,0.485300549842228,0,1.45462575940567,5.59175283654366,0.585561594023094,0.628340120440365,4.59822699375465,0,0,0,1.49790639404823,0,0.125654352112864,0.695297280769106,0.511430914660661,1.45451631191692,0.811206315338788,1.52759045775474,0.995255764880744,1.0108910337347,0.420883711772948,0.260240885925407,0.459804208866946,0.180062129805349,0,0.272145996605311,0.768682321709099,0.468508622798644,0.258703370739016,0.215567992932842,0,0,0,0,0,0.205782136407943,0,0,0,0,7.66365358381357,7.27030785941398,3.6012412292203,2.13070262026689,2.75469924446365,1.23413690309903,1.86027155800326,1.87791380979733,0.934122738937356,1.48103864922132,3.61168420974009,2.99954595319666,2.33919979880532,3.29325172936576,2.14730270016595,0.630869845692382,0.102904612379284,0,2.64450566663544,0.853153002140936,0.928946687441754,1.9330119198314,1.21010114774006,3.7804267453628,2.28270751335071,4.74529061544512,2.9645811850322,3.2673577144035,4.37704238490532,3.31438948102504,2.69645822596266,5.61958929674205,4.38110801159608,0.379335801906163,0.456994050438915,1.1270773567308,0.407302655690628,0.193952487167626,0.701358198903186,1.58091342810643,1.47610147979602,1.09899109488962,1.60416313098341,0.296452627087149,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0.964887042726734,4.0645701836653,1.51593129416388,2.11854469374634,0.339490171550376,1.40814148973101,0.837531287209079,0.714130922658041,1.17080188714679,1.7339865851681,2.43611158613652,2.23236676120482,4.26044618260919,2.41758974612254,2.31438493730419,0,0,1.96705709207614,1.93155722413313,2.24770825982909,0.937693492737625,0,0.504941854408746,0.631016438832513,0.390438744296638,0,0.238968797952552,0.445597348164788,0,0.404810701674894,0.876767573733936,0,0.963963949265421,12.2068473279111,0.534196811001766,0.488660878060728,17.9817434040064,0,0.242780636154981,0,0.754420319023592,0,0.922305443831782,0.775284879504663,0.363533729477506,1.42598951353889,2.21225730555071,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0,0.704015124191131,0.21183207086382,2.20528398054962,0.32977250588296,0.322928853391811,0.663442174209714,0.238744688006273,0.164140899745061,4.37221254944776,1.11255181206306,0.341741761595705,0.412773735926445,0,0.188368457004691,0.27338845544205,1.14389086603261,0,0,0,13.3653886522116,0.474503990371703,2.43983360552218,2.05210147561422,3.76358932826044,5.02233896616208,11.1937407499401,11.1582165229204,12.3025292732494,6.61036363788144,3.10669656543463,0,0,0.496375471371293,0.972255941720238,0.645799117388655,1.01373675294467,0.821500670520278,0.39061315453185,0.524296722128554,0.241584120826006,0,0,0.405450430580328,0.205421914329655,0,0,0,0,0.295379054349154,0.100966449948148,0,0.100826185136841,0.194915761479505,0,0,0.680191150845634,0,0,0,47.717829725951,35.4719878602734,16.6667978083211,15.2201549146137,1.00314420807073,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,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| ||
|EntrezGene=16533 | |||
|HGNC= | |||
|MCL_coexpression_id=1284 | |||
|UniProt=Q5SQK1,Q8CAE3 | |||
|association_with_transcript=268bp_to_ENSMUST00000020362,NM_031169,uc007iks.2_5end | |||
|description=CAGE_peak_1_at_Kcnmb1_5end | |||
|id=chr11:33863281..33863297,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!8.83e-10!18;UBERON:0000948!8.83e-10!18;UBERON:0005498!8.83e-10!18;UBERON:0004140!8.83e-10!18;UBERON:0009881!8.83e-10!18;UBERON:0004141!8.83e-10!18;UBERON:0003084!8.83e-10!18;UBERON:0007005!8.83e-10!18;UBERON:0004139!8.83e-10!18;UBERON:0004291!8.83e-10!18;UBERON:0003103!2.46e-09!43;UBERON:0004535!3.35e-08!23;UBERON:0001009!3.35e-08!23;UBERON:0004872!1.45e-07!33;UBERON:0005153!3.76e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.59e-13,18;UBERON:0000948,1.59e-13,18;UBERON:0005498,1.59e-13,18;UBERON:0004140,1.59e-13,18;UBERON:0009881,1.59e-13,18;UBERON:0004141,1.59e-13,18;UBERON:0003084,1.59e-13,18;UBERON:0007005,1.59e-13,18;UBERON:0004139,1.59e-13,18;UBERON:0004291,1.59e-13,18;UBERON:0004535,9.51e-13,23;UBERON:0001009,9.51e-13,23;UBERON:0005409,1.03e-09,47;UBERON:0003103,2.32e-09,43;UBERON:0004872,7.86e-09,33;UBERON:0005153,3.42e-08,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,2.82985379639542,3.43840127926508,4.12537673821954,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,1.15265491596466,0.103689612308478,0,0,0.285650984403804,0.441737081903227,0.244981598429908,0.0958454710182364,0,1.10115880999389,0.255374676170375,0,0.131886287730194,0,0.52091337055676,0.558365998002762,0.56276261003168,0.916789486660861,0.294628585473668,0.142371680799103,0.186399445825301,0,0,3.76823835312181,1.72084775396277,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.91347103775248,0.258937883647172,0.148442139064825,0,0,0,0,0.352766121407114,0.376999773989026,1.73036477414062,33.6916501623394,0.884610551949874,0.485300549842228,0,1.45462575940567,5.59175283654366,0.585561594023094,0.628340120440365,4.59822699375465,0,0,0,1.49790639404823,0,0.125654352112864,0.695297280769106,0.511430914660661,1.45451631191692,0.811206315338788,1.52759045775474,0.995255764880744,1.0108910337347,0.420883711772948,0.260240885925407,0.459804208866946,0.180062129805349,0,0.272145996605311,0.768682321709099,0.468508622798644,0.258703370739016,0.215567992932842,0,0,0,0,0,0.205782136407943,0,0,0,0,7.66365358381357,7.27030785941398,3.6012412292203,2.13070262026689,2.75469924446365,1.23413690309903,1.86027155800326,1.87791380979733,0.934122738937356,1.48103864922132,3.61168420974009,2.99954595319666,2.33919979880532,3.29325172936576,2.14730270016595,0.630869845692382,0.102904612379284,0,2.64450566663544,0.853153002140936,0.928946687441754,1.9330119198314,1.21010114774006,3.7804267453628,2.28270751335071,4.74529061544512,2.9645811850322,3.2673577144035,4.37704238490532,3.31438948102504,2.69645822596266,5.61958929674205,4.38110801159608,0.379335801906163,0.456994050438915,1.1270773567308,0.407302655690628,0.193952487167626,0.701358198903186,1.58091342810643,1.47610147979602,1.09899109488962,1.60416313098341,0.296452627087149,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0.964887042726734,4.0645701836653,1.51593129416388,2.11854469374634,0.339490171550376,1.40814148973101,0.837531287209079,0.714130922658041,1.17080188714679,1.7339865851681,2.43611158613652,2.23236676120482,4.26044618260919,2.41758974612254,2.31438493730419,0,0,1.96705709207614,1.93155722413313,2.24770825982909,0.937693492737625,0,0.504941854408746,0.631016438832513,0.390438744296638,0,0.238968797952552,0.445597348164788,0,0.404810701674894,0.876767573733936,0,0.963963949265421,12.2068473279111,0.534196811001766,0.488660878060728,17.9817434040064,0,0.242780636154981,0,0.754420319023592,0,0.922305443831782,0.775284879504663,0.363533729477506,1.42598951353889,2.21225730555071,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0,0.704015124191131,0.21183207086382,2.20528398054962,0.32977250588296,0.322928853391811,0.663442174209714,0.238744688006273,0.164140899745061,4.37221254944776,1.11255181206306,0.341741761595705,0.412773735926445,0,0.188368457004691,0.27338845544205,1.14389086603261,0,0,0,13.3653886522116,0.474503990371703,2.43983360552218,2.05210147561422,3.76358932826044,5.02233896616208,11.1937407499401,11.1582165229204,12.3025292732494,6.61036363788144,3.10669656543463,0,0,0.496375471371293,0.972255941720238,0.645799117388655,1.01373675294467,0.821500670520278,0.39061315453185,0.524296722128554,0.241584120826006,0,0,0.405450430580328,0.205421914329655,0,0,0,0,0.295379054349154,0.100966449948148,0,0.100826185136841,0.194915761479505,0,0,0.680191150845634,0,0,0,47.717829725951,35.4719878602734,16.6667978083211,15.2201549146137,1.00314420807073,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,1.11123363900808,0.412070114477788,0.64183841918363,0.758091635291392,0.50695859978048,0.754505365544305,0.468207537349412,0.576226371643824,0.804096565378586,1.42888107384922,1.15884325944855,0.38581844092741,1.23625770240992,0.441596760403192,1.37147700954166,0.354951612318675,1.1921809497366,0.581385666529314,0.470546902076653,0.930760686808441,0.182927972872773,0.526139422875686,0.814824683075171,0,1.06771516311757,0.591026894253381,0,0.464810523557898,0.771626443924566,0.499621155875892,1.40358965067245,0.214871054048298,0,0.882365676478062,0.695603506861264 | |||
|short_description=p1@Kcnmb1 | |||
}} |
Revision as of 19:31, 12 September 2013
Short description: | p1@Kcnmb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kcnmb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1284 |
Association with transcript: | 268bp_to_ENSMUST00000020362, NM_031169, uc007iks.2_5end |
EntrezGene: | Kcnmb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.59e-13 | 18 |
heart | 1.59e-13 | 18 |
primitive heart tube | 1.59e-13 | 18 |
primary heart field | 1.59e-13 | 18 |
anterior lateral plate mesoderm | 1.59e-13 | 18 |
heart tube | 1.59e-13 | 18 |
heart primordium | 1.59e-13 | 18 |
cardiac mesoderm | 1.59e-13 | 18 |
cardiogenic plate | 1.59e-13 | 18 |
heart rudiment | 1.59e-13 | 18 |
cardiovascular system | 9.51e-13 | 23 |
circulatory system | 9.51e-13 | 23 |
gastrointestinal system | 1.03e-09 | 47 |
compound organ | 2.32e-09 | 43 |
splanchnic layer of lateral plate mesoderm | 7.86e-09 | 33 |
epithelial bud | 3.42e-08 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.