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FFCP PHASE1:Mm9::chr11:34934567..34934620,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20564|HGNC=|MCL_coexpression_id=2664|UniProt=Q9WVB4|association_with_transcript=-105bp_to_ENSMUST00000069837_5end|description=CAGE_peak_1_at_Slit3_5end|id=chr11:34934567..34934620,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!5.68e-13!333;UBERON:0000464!1.63e-09!57;UBERON:0000922!5.39e-09!328;UBERON:0002048!1.72e-08!14;UBERON:0000117!1.72e-08!14;UBERON:0000171!1.72e-08!14;UBERON:0000170!1.72e-08!14;UBERON:0005597!1.72e-08!14;UBERON:0000118!1.72e-08!14;UBERON:0005153!2.44e-08!17;UBERON:0003102!4.12e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.65e-08,14;UBERON:0000117,1.65e-08,14;UBERON:0000171,1.65e-08,14;UBERON:0000170,1.65e-08,14;UBERON:0005597,1.65e-08,14;UBERON:0000118,1.65e-08,14;UBERON:0005153,2.35e-08,17;UBERON:0003102,2.04e-07,22|phase1_expression=22.5809874417759,0.697950815278722,0.454999239389536,0,0,0.16787927191189,0,0,0.140788722151667,0,0,0,0,0,1.33243904726265,1.82227740650843,0,0.630924330716475,0.822686601634433,0,24.5775108536592,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,223.340955088674,210.661263074151,146.28676147286,91.5397872887206,13.0815093828268,29.6576346691537,20.9984291000226,18.1982348112971,37.3756667348926,0,0,0.336093799142464,33.1864672486372,100.286703978565,90.2426161485524,1.41621522601718,4.23192783417626,1.90149421051854,15.2480039431109,12.450127145556,3.1496490104849,4.94433181283487,2.1314403448383,24.8668091730276,5.76327457982332,2.59224030771194,1.89008313664367,1.68259969081106,6.28432165688368,5.07997644188711,3.67472397644862,2.77951865952885,2.75765635983006,8.8092704799511,14.1732945274558,8.60196586234964,2.63772575460388,1.09785172322892,4.16730696445408,4.18774498502071,3.37657566019008,15.5854212732346,5.00868595305235,4.8406371471695,5.96478226640962,1.51452386666368,12.1670211771925,3.18850937571846,0.860423876981386,0,0,0,0,11.9377757111989,0,0,0,75.6329164200774,0,0,0,0.216491041011214,0,0,5.709193985953,20.7150306917737,36.5167662099469,46.1470969197921,27.4018930480927,23.9840117146301,21.8547828801303,36.5700879192042,21.1119873433855,25.9554716121093,119.728267529687,20.3460426948471,48.2065212843279,33.7887523244402,51.8816520854688,24.2309289583559,19.3235326027621,29.7414323675106,8.9409969323007,0,0,0,5.09288173976397,44.8350590762254,8.79580464790051,40.3272422846081,54.2116769540301,11.8439185398949,34.5573890334324,112.328818326899,63.1987410699273,20.975988949995,14.5204880561667,26.5445703643916,14.9436367881757,24.4884496535275,26.2226383034144,23.2684827097541,19.601399203582,13.5867500611607,23.2833033665114,73.2931175971664,71.2929922232679,62.8145513265297,37.2632745126877,77.8532297831674,82.1875112992313,82.3128545631774,32.2435512245959,0,0,0,54.888329721908,50.1885768359546,41.5943361974944,60.3699075742286,38.959317885986,45.0459969631144,29.7643449280522,35.948635787549,35.4966640796195,40.3171632288027,25.1176220041016,32.2653861992506,29.9709974221931,29.8588156795829,31.5385084086874,76.3352513287782,65.858951922742,2.64335026387038,12.9580777665137,38.8184615974126,42.4993109504602,48.325297995785,31.6643133658648,30.2434139629024,25.6804595251955,12.8122846617018,25.0342411180497,23.8768448360256,28.0528625578023,23.7856186285327,8.98819408654222,14.2651112917298,11.7493351220077,28.4501851429623,40.9009675142829,38.3206301288473,31.3623044881784,29.4807780494791,30.2285383727273,36.8036646063177,20.9606410131035,17.1128613347099,13.6970851953199,1.1858105083486,9.67701613153345,8.25547779475453,1.79889689907883,1.21716072833102,1.68824011826692,4.07401362850272,5.75392274901621,3.72911021582581,2.19649130550465,18.6898668485561,8.93138274404408,3.12037673114561,2.77836765741823,1.61457672169721,1.4473305640901,72.6080037354756,79.0179187082921,60.7859362128757,67.3887990527497,48.3461911474314,63.8198840853318,72.8413541111202,84.4928695224269,106.246087127573,97.444463445461,113.053430978158,87.5030100582041,89.7961905702657,89.3931182033742,0,0,28.0305635620851,48.8408040959376,4.49541651965817,6.44664276257117,62.13134429776,37.8706390806559,6.62567260774139,5.85658116444958,6.03185513651837,3.58453196928828,5.34716817797746,7.07691326972081,8.50102473517278,6.13737301613755,11.8586333383957,20.8858855674175,72.1055632858005,50.3925658378332,78.3486274490701,68.1326607876571,41.1509928853885,53.8973012264059,54.1159166966904,60.9194407611551,74.4160770059547,88.848757755795,74.1689201392795,120.693198186532,96.2542921638748,51.513991543538,33.7339547439996,44.3482835967203,3.40439605753788,28.9898361390409,20.0505959863269,24.8630960636647,26.2463545790565,53.8673829158253,41.1372551505302,27.0973804711993,92.2259812690382,31.774810629573,37.0487708732336,224.245304000413,154.521456347982,95.4753601612707,74.6077150019603,72.8785594868072,13.699599321603,5.19190845629427,11.1066072518604,61.9160603889667,58.7066651761986,11.1137389632768,5.33107488111998,6.17701067657611,0,0,0,13.3653886522116,39.8583351912231,52.0497835844733,30.0254847484608,34.2904805463729,29.6973086694802,46.3933351563783,36.5328274305985,25.3903263724509,25.9229946583586,16.776161453347,3.94585057078933,19.7361840778052,16.876766026624,22.9452402245976,27.1235629303235,34.4670496001187,41.4271052419512,70.7009809702649,66.9002617436035,25.6079168075566,24.4825505319186,8.21628913633263,38.1123404745509,19.9259256899765,10.6535074841792,11.0996551313838,8.74197961037565,5.16840432935866,4.57837534241189,5.55315474714812,2.66723823292499,1.51239277705261,3.50848370663109,2.69393156592922,6.42822961998629,45.3460767230423,0.443971906748129,0.717710852875806,1.00730769818447,141.607972425596,234.97845926488,34.4325053622458,28.5109944175158,33.6053309703693,37.2736216127264,33.1434170285167,45.8316410751517,44.1662678623277,33.5690434687615,37.769694869485,39.1513050134447,39.6282658837314,34.8919654917838,51.2582708634302,11.8317576245961,64.642029490967,37.2199260544012,43.2729956381563,19.0747977991464,22.0612210140017,44.0048521047198,43.6794321346456,51.6679927442823,46.4962869645387,51.4562978777187,54.7016390019621,48.5063008693991,50.5798703998467,52.3811476875193,49.0582502021566,47.1649206595562,46.6840313522166,43.2690195843472,46.662057682604,47.3159568291873,45.0788547644717,51.263780838674,47.0922389888744,50.7249560438632,52.2918276770561,43.1710015979743,47.0894783473739,46.8524192768223,44.8913817326191,49.1148975034081,46.7896291283926,47.470801007684,49.2699154971372,56.9074502394367,59.954538705107,44.4470056046276,61.4531214578133,60.6384012658234,44.5594666621421,36.4032501924062|short_description=p1@Slit3}}
|EntrezGene=20564
|HGNC=
|MCL_coexpression_id=2664
|UniProt=Q9WVB4
|association_with_transcript=-105bp_to_ENSMUST00000069837_5end
|description=CAGE_peak_1_at_Slit3_5end
|id=chr11:34934567..34934620,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!5.68e-13!333;UBERON:0000464!1.63e-09!57;UBERON:0000922!5.39e-09!328;UBERON:0002048!1.72e-08!14;UBERON:0000117!1.72e-08!14;UBERON:0000171!1.72e-08!14;UBERON:0000170!1.72e-08!14;UBERON:0005597!1.72e-08!14;UBERON:0000118!1.72e-08!14;UBERON:0005153!2.44e-08!17;UBERON:0003102!4.12e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.65e-08,14;UBERON:0000117,1.65e-08,14;UBERON:0000171,1.65e-08,14;UBERON:0000170,1.65e-08,14;UBERON:0005597,1.65e-08,14;UBERON:0000118,1.65e-08,14;UBERON:0005153,2.35e-08,17;UBERON:0003102,2.04e-07,22
|phase1_expression=22.5809874417759,0.697950815278722,0.454999239389536,0,0,0.16787927191189,0,0,0.140788722151667,0,0,0,0,0,1.33243904726265,1.82227740650843,0,0.630924330716475,0.822686601634433,0,24.5775108536592,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,223.340955088674,210.661263074151,146.28676147286,91.5397872887206,13.0815093828268,29.6576346691537,20.9984291000226,18.1982348112971,37.3756667348926,0,0,0.336093799142464,33.1864672486372,100.286703978565,90.2426161485524,1.41621522601718,4.23192783417626,1.90149421051854,15.2480039431109,12.450127145556,3.1496490104849,4.94433181283487,2.1314403448383,24.8668091730276,5.76327457982332,2.59224030771194,1.89008313664367,1.68259969081106,6.28432165688368,5.07997644188711,3.67472397644862,2.77951865952885,2.75765635983006,8.8092704799511,14.1732945274558,8.60196586234964,2.63772575460388,1.09785172322892,4.16730696445408,4.18774498502071,3.37657566019008,15.5854212732346,5.00868595305235,4.8406371471695,5.96478226640962,1.51452386666368,12.1670211771925,3.18850937571846,0.860423876981386,0,0,0,0,11.9377757111989,0,0,0,75.6329164200774,0,0,0,0.216491041011214,0,0,5.709193985953,20.7150306917737,36.5167662099469,46.1470969197921,27.4018930480927,23.9840117146301,21.8547828801303,36.5700879192042,21.1119873433855,25.9554716121093,119.728267529687,20.3460426948471,48.2065212843279,33.7887523244402,51.8816520854688,24.2309289583559,19.3235326027621,29.7414323675106,8.9409969323007,0,0,0,5.09288173976397,44.8350590762254,8.79580464790051,40.3272422846081,54.2116769540301,11.8439185398949,34.5573890334324,112.328818326899,63.1987410699273,20.975988949995,14.5204880561667,26.5445703643916,14.9436367881757,24.4884496535275,26.2226383034144,23.2684827097541,19.601399203582,13.5867500611607,23.2833033665114,73.2931175971664,71.2929922232679,62.8145513265297,37.2632745126877,77.8532297831674,82.1875112992313,82.3128545631774,32.2435512245959,0,0,0,54.888329721908,50.1885768359546,41.5943361974944,60.3699075742286,38.959317885986,45.0459969631144,29.7643449280522,35.948635787549,35.4966640796195,40.3171632288027,25.1176220041016,32.2653861992506,29.9709974221931,29.8588156795829,31.5385084086874,76.3352513287782,65.858951922742,2.64335026387038,12.9580777665137,38.8184615974126,42.4993109504602,48.325297995785,31.6643133658648,30.2434139629024,25.6804595251955,12.8122846617018,25.0342411180497,23.8768448360256,28.0528625578023,23.7856186285327,8.98819408654222,14.2651112917298,11.7493351220077,28.4501851429623,40.9009675142829,38.3206301288473,31.3623044881784,29.4807780494791,30.2285383727273,36.8036646063177,20.9606410131035,17.1128613347099,13.6970851953199,1.1858105083486,9.67701613153345,8.25547779475453,1.79889689907883,1.21716072833102,1.68824011826692,4.07401362850272,5.75392274901621,3.72911021582581,2.19649130550465,18.6898668485561,8.93138274404408,3.12037673114561,2.77836765741823,1.61457672169721,1.4473305640901,72.6080037354756,79.0179187082921,60.7859362128757,67.3887990527497,48.3461911474314,63.8198840853318,72.8413541111202,84.4928695224269,106.246087127573,97.444463445461,113.053430978158,87.5030100582041,89.7961905702657,89.3931182033742,0,0,28.0305635620851,48.8408040959376,4.49541651965817,6.44664276257117,62.13134429776,37.8706390806559,6.62567260774139,5.85658116444958,6.03185513651837,3.58453196928828,5.34716817797746,7.07691326972081,8.50102473517278,6.13737301613755,11.8586333383957,20.8858855674175,72.1055632858005,50.3925658378332,78.3486274490701,68.1326607876571,41.1509928853885,53.8973012264059,54.1159166966904,60.9194407611551,74.4160770059547,88.848757755795,74.1689201392795,120.693198186532,96.2542921638748,51.513991543538,33.7339547439996,44.3482835967203,3.40439605753788,28.9898361390409,20.0505959863269,24.8630960636647,26.2463545790565,53.8673829158253,41.1372551505302,27.0973804711993,92.2259812690382,31.774810629573,37.0487708732336,224.245304000413,154.521456347982,95.4753601612707,74.6077150019603,72.8785594868072,13.699599321603,5.19190845629427,11.1066072518604,61.9160603889667,58.7066651761986,11.1137389632768,5.33107488111998,6.17701067657611,0,0,0,13.3653886522116,39.8583351912231,52.0497835844733,30.0254847484608,34.2904805463729,29.6973086694802,46.3933351563783,36.5328274305985,25.3903263724509,25.9229946583586,16.776161453347,3.94585057078933,19.7361840778052,16.876766026624,22.9452402245976,27.1235629303235,34.4670496001187,41.4271052419512,70.7009809702649,66.9002617436035,25.6079168075566,24.4825505319186,8.21628913633263,38.1123404745509,19.9259256899765,10.6535074841792,11.0996551313838,8.74197961037565,5.16840432935866,4.57837534241189,5.55315474714812,2.66723823292499,1.51239277705261,3.50848370663109,2.69393156592922,6.42822961998629,45.3460767230423,0.443971906748129,0.717710852875806,1.00730769818447,141.607972425596,234.97845926488,34.4325053622458,28.5109944175158,33.6053309703693,37.2736216127264,33.1434170285167,45.8316410751517,44.1662678623277,33.5690434687615,37.769694869485,39.1513050134447,39.6282658837314,34.8919654917838,51.2582708634302,11.8317576245961,64.642029490967,37.2199260544012,43.2729956381563,19.0747977991464,22.0612210140017,44.0048521047198,43.6794321346456,51.6679927442823,46.4962869645387,51.4562978777187,54.7016390019621,48.5063008693991,50.5798703998467,52.3811476875193,49.0582502021566,47.1649206595562,46.6840313522166,43.2690195843472,46.662057682604,47.3159568291873,45.0788547644717,51.263780838674,47.0922389888744,50.7249560438632,52.2918276770561,43.1710015979743,47.0894783473739,46.8524192768223,44.8913817326191,49.1148975034081,46.7896291283926,47.470801007684,49.2699154971372,56.9074502394367,59.954538705107,44.4470056046276,61.4531214578133,60.6384012658234,44.5594666621421,36.4032501924062
|short_description=p1@Slit3
}}

Revision as of 19:33, 12 September 2013

Short description:p1@Slit3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Slit3_5end
Coexpression cluster:MCL_coexpression_mm9:2664
Association with transcript: -105bp_to_ENSMUST00000069837_5end
EntrezGene:Slit3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Slit3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G722.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A324.58
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8223.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9210.66
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3146.29
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B791.54
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.08
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B829.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C321.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C418.20
Mouse Astrocytes, donor3.CNhs12107.11633-122C437.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C133.19
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1100.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C590.24
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C615.25
Mouse Meningeal cells, donor3.CNhs12109.11639-122D112.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C824.87
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.67
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.59
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D91.51
Mouse Schwann, donor2.CNhs12573.11746-123F912.17
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G675.63
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.71
accessory axillary lymph node, adult.CNhs10475.1063-29H920.72
adrenal gland, adult.CNhs10508.49-24D736.52
adrenal gland, embryo E14.CNhs11038.406-44C546.15
adrenal gland, embryo E16.CNhs11004.1254-43D627.40
adrenal gland, embryo E17.CNhs11043.1263-45I123.98
adrenal gland, embryo E18.CNhs11026.1262-18F521.85
adrenal gland, neonate N00.CNhs11191.1311-23C136.57
adrenal gland, neonate N25.CNhs11223.1377-27I321.11
amnion, adult pregnant day17.5.CNhs10488.583-22A825.96
aorta, adult.CNhs10498.46-23H1119.73
bone (os femoris), adult.CNhs10483.56-12G220.35
bone (os femoris), neonate N02.CNhs11227.1985-43F548.21
bone (os femoris), neonate N16.CNhs11225.1525-43A633.79
bone (os femoris), neonate N20.CNhs11195.1350-25C351.88
cecum, adult.CNhs10467.37-13H424.23
cerebellum, adult.CNhs10494.15-8B219.32
cerebellum, neonate N30.CNhs11135.1395-42I229.74
colon, adult.CNhs10468.36-18H78.94
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.09
corpus striatum, adult.CNhs10487.19-21D844.84
corpus striatum, neonate N00.CNhs11226.630-43F18.80
cortex, adult.CNhs10473.12-14D540.33
cortex, neonate N30.CNhs11107.1392-42F254.21
diencephalon, adult.CNhs10482.20-12F211.84
diencephalon, neonate N30.CNhs11201.1388-42B234.56
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1112.33
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A263.20
epididymis, adult.CNhs10490.58-23B220.98
eyeball, adult.CNhs10484.31-12G414.52
eyeball, embryo E12.CNhs11016.345-16C626.54
eyeball, embryo E14.CNhs10521.399-16E214.94
eyeball, embryo E15.CNhs10593.426-16C924.49
eyeball, embryo E17.CNhs11023.1261-18D426.22
eyeball, neonate N00.CNhs11207.633-15C623.27
eyeball, neonate N01.CNhs11140.1532-43E719.60
eyeball, neonate N02.CNhs11205.1551-44G813.59
eyeball, neonate N16.CNhs11188.777-19A223.28
forelimb, embryo E11.CNhs10596.335-25E273.29
forelimb, embryo E12.CNhs10600.359-14H271.29
forelimb, embryo E13.CNhs10589.384-1E262.81
forelimb, embryo E14.CNhs10577.413-26A837.26
forelimb, embryo E15.CNhs11007.437-20E777.85
forelimb, embryo E17.CNhs10598.1517-43C482.19
forelimb, embryo E18.CNhs11008.1520-43B582.31
gonad, embryo E13.CNhs11044.1564-45I632.24
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E954.89
heart, embryo E12.CNhs11015.353-12F550.19
heart, embryo E13.CNhs11013.376-3I941.59
heart, embryo E14.CNhs10597.403-26D460.37
heart, embryo E15.CNhs11017.431-16C838.96
heart, embryo E16.CNhs11021.457-17C645.05
heart, embryo E17.CNhs11025.479-18E529.76
heart, embryo E18.CNhs11030.1283-20G335.95
heart, neonate N00.CNhs11213.639-21E335.50
heart, neonate N03.CNhs11221.1349-25I240.32
heart, neonate N10.CNhs11118.749-24G125.12
heart, neonate N16.CNhs11209.782-15G132.27
heart, neonate N20.CNhs11127.821-26I629.97
heart, neonate N25.CNhs11196.1351-25D329.86
heart, neonate N30.CNhs11202.1390-42D231.54
hippocampus, adult.CNhs10478.13-16E876.34
hippocampus, neonate N00.CNhs11228.627-43G165.86
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A312.96
intestine, embryo E12.CNhs11019.1251-16I538.82
intestine, embryo E13.CNhs11010.381-16D542.50
intestine, embryo E15.CNhs10602.976-16D848.33
intestine, embryo E16.CNhs10585.463-22H431.66
intestine, embryo E17.CNhs10582.482-18D330.24
intestine, embryo E18.CNhs10526.1289-20F725.68
intestine, neonate N00.CNhs11126.644-26D112.81
intestine, neonate N01.CNhs11192.1322-23E925.03
intestine, neonate N06.CNhs11102.688-20B823.88
intestine, neonate N07.CNhs11095.720-20F228.05
intestine, neonate N10.CNhs11098.755-23A523.79
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E314.27
intestine, neonate N30.CNhs11131.1384-42G111.75
kidney, embryo E14.CNhs10606.411-4I928.45
kidney, embryo E15.CNhs10997.434-16F840.90
kidney, embryo E16.CNhs10584.464-22A538.32
kidney, embryo E17.CNhs11028.483-18I231.36
kidney, embryo E18.CNhs11001.1288-20C729.48
kidney, neonate N00.CNhs11214.646-21G730.23
kidney, neonate N10.CNhs11206.758-6D536.80
kidney, neonate N20.CNhs11113.832-19I120.96
kidney, neonate N25.CNhs11122.1353-25F317.11
kidney, neonate N30.CNhs11203.1385-42H113.70
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F89.68
liver, embryo E13.CNhs10524.378-3H68.26
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G45.75
liver, neonate N00.CNhs11117.641-24F43.73
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H28.93
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B172.61
lung, embryo E12.CNhs10522.354-16G279.02
lung, embryo E14.CNhs10604.404-26F860.79
lung, embryo E15.CNhs11020.432-17C567.39
lung, embryo E16.CNhs10998.458-17B648.35
lung, embryo E17.CNhs10605.480-44A663.82
lung, embryo E18.CNhs10583.1287-20I672.84
lung, neonate N00.CNhs11224.640-42C684.49
lung, neonate N06.CNhs11212.683-20E5106.25
lung, neonate N07.CNhs11111.715-19A397.44
lung, neonate N10.CNhs11219.750-23E6113.05
lung, neonate N20.CNhs11109.822-18A487.50
lung, neonate N25.CNhs11119.1359-25C789.80
lung, neonate N30.CNhs11133.1394-42H289.39
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B628.03
mammary gland, adult pregnant day19.CNhs10476.588-5H248.84
medulla oblongata, adult.CNhs10477.17-12C24.50
medulla oblongata, neonate N30.CNhs11200.1396-42A36.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C762.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C237.87
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.03
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.08
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.14
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.86
olfactory brain, adult.CNhs10489.18-22I920.89
ovary, adult.CNhs10507.91-2I772.11
ovary, embryo E18.CNhs11040.505-44H750.39
ovary, neonate N00.CNhs11217.1299-22I478.35
oviduct, adult pregnant day01.CNhs10500.988-6G668.13
pancreas, adult.CNhs10486.34-16E441.15
pancreas, embryo E14.CNhs11012.405-44F453.90
pancreas, embryo E15.CNhs11042.1556-45F254.12
pancreas, embryo E16.CNhs11003.460-26E560.92
pancreas, embryo E17.CNhs10599.1558-45G374.42
pancreas, embryo E18.CNhs10580.1535-43I788.85
pancreas, neonate N00.CNhs11105.645-26G974.17
pancreas, neonate N01.CNhs11138.1531-43D7120.69
pancreas, neonate N02.CNhs11139.1539-43D896.25
pancreas, neonate N16.CNhs11136.787-43B651.51
pancreas, neonate N25.CNhs11094.1555-45E233.73
pancreas, neonate N30.CNhs11182.1548-44H544.35
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E628.99
pituitary gland, embryo E13.CNhs11009.370-44C720.05
pituitary gland, embryo E14.CNhs11037.398-44A524.86
pituitary gland, embryo E15.CNhs10592.427-16B926.25
pituitary gland, embryo E16.CNhs11036.449-43F653.87
pituitary gland, embryo E17.CNhs11039.1265-44F541.14
pituitary gland, neonate N00.CNhs11190.1308-22E927.10
placenta, adult pregnant day10.CNhs10472.539-13I792.23
placenta, adult pregnant day17.CNhs10464.577-18G331.77
prostate, adult.CNhs10470.859-1F837.05
skin, adult.CNhs10492.30-1C3224.25
skin, neonate N00.CNhs11124.650-25G4154.52
skin, neonate N03.CNhs11215.662-22H395.48
skin, neonate N06.CNhs11097.693-20I574.61
skin, neonate N10.CNhs11108.762-6C472.88
small intestine, neonate N16.CNhs11114.790-21I113.70
spinal cord, adult.CNhs10505.24-13C95.19
spleen, adult.CNhs10465.25-2G211.11
spleen, embryo E16.CNhs11035.461-43C161.92
spleen, embryo E18.CNhs11011.1271-21F258.71
spleen, neonate N10.CNhs11116.752-24D111.11
spleen, neonate N20.CNhs11112.824-19H15.33
spleen, neonate N25.CNhs11099.1354-25G36.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H613.37
stomach, embryo E12.CNhs10588.356-43E339.86
stomach, embryo E15.CNhs10603.1252-16G852.05
stomach, embryo E16.CNhs11022.459-17D430.03
stomach, embryo E17.CNhs11006.1035-18D534.29
stomach, embryo E18.CNhs10999.1286-20C629.70
stomach, neonate N03.CNhs11193.1340-24B846.39
stomach, neonate N07.CNhs11210.718-18A936.53
stomach, neonate N25.CNhs11104.1355-25E425.39
stomach, neonate N30.CNhs11134.1386-42I125.92
submandibular gland, adult.CNhs10469.59-29C116.78
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F519.74
testis, embryo E15.CNhs11034.443-27C516.88
testis, embryo E16.CNhs11033.470-26G522.95
testis, embryo E17.CNhs11029.486-18I527.12
testis, embryo E18.CNhs11027.503-18G534.47
testis, neonate N00.CNhs11189.1300-22B741.43
testis, neonate N07.CNhs11222.726-26I470.70
testis, neonate N10.CNhs11204.763-44D966.90
testis, neonate N20.CNhs11110.839-18H325.61
testis, neonate N30.CNhs11130.1391-42E224.48
thymus, adult.CNhs10471.38-12B58.22
thymus, embryo E14.CNhs11041.402-44I438.11
thymus, embryo E15.CNhs11005.430-45I219.93
thymus, embryo E16.CNhs11002.456-26C510.65
thymus, embryo E17.CNhs10581.478-18C111.10
thymus, embryo E18.CNhs10595.1273-19G48.74
thymus, neonate N02.CNhs11181.1541-43F85.17
thymus, neonate N03.CNhs11137.2104-43C74.58
thymus, neonate N06.CNhs11197.681-26C45.55
thymus, neonate N07.CNhs11211.713-19D32.67
thymus, neonate N10.CNhs11194.748-24E41.51
thymus, neonate N20.CNhs11186.820-7A23.51
thymus, neonate N25.CNhs11125.1362-25G72.69
thymus, neonate N30.CNhs11132.1393-42G26.43
tongue, adult.CNhs10499.32-1B445.35
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E4141.61
uterus, adult pregnant day19.CNhs10497.590-15F5234.98
uterus, adult.CNhs10509.92-27E534.43
vagina, adult.CNhs10502.89-27D528.51
vesicular gland, adult.CNhs10491.51-27F833.61
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A137.27
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A233.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A345.83
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D744.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A433.57
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A537.77
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A639.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A739.63
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A834.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A951.26
whole body, embryo E11.CNhs11014.324-5I811.83
whole body, embryo E12.CNhs10587.857-27C964.64
whole body, embryo E13.CNhs10512.372-23H237.22
whole body, embryo E14.5.CNhs10578.420-27D243.27
whole body, embryo E14.CNhs10519.395-14B119.07
whole body, embryo E16.CNhs10514.453-14F222.06
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G544.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G543.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G551.67
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G546.50
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G551.46
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G554.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G548.51
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G550.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G552.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G549.06
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G547.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G546.68
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G543.27
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G546.66
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G547.32
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G545.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G551.26
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G547.09
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G550.72
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G552.29
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G543.17
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G547.09
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G546.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G544.89
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G549.11
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G546.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G547.47
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G549.27
whole body, embryo E17.5.CNhs10513.490-9F956.91
whole body, embryo E17.CNhs10517.475-3I559.95
whole body, embryo E18.CNhs10516.493-3B344.45
whole body, neonate N00.CNhs10525.657-19C261.45
whole body, neonate N01.CNhs10576.659-23C660.64
whole body, neonate N06.CNhs10515.692-21D144.56
whole body, neonate N10.CNhs10518.761-6B436.40





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
lung1.65e-0814
respiratory tube1.65e-0814
respiration organ1.65e-0814
pair of lungs1.65e-0814
lung primordium1.65e-0814
lung bud1.65e-0814
epithelial bud2.35e-0817
surface structure2.04e-0722







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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