FFCP PHASE1:Mm9::chr11:3931773..3931836,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=103655|HGNC=|MCL_coexpression_id=8|UniProt=Q8R0F9,Q5SQ22|association_with_transcript=0bp_to_ENSMUST00000019512,ENSMUST00000131171,ENSMUST00000136222,NM_146013,uc007hue.1_5end|description=CAGE_peak_1_at_Sec14l4_5end|id=chr11:3931773..3931836,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000466!1.39e-18!79;UBERON:0002365!2.65e-14!25;UBERON:0002330!2.65e-14!25;UBERON:0009854!2.94e-14!23;UBERON:0009856!2.94e-14!23;UBERON:0002107!6.77e-14!22;UBERON:0007499!6.77e-14!22;UBERON:0006925!6.77e-14!22;UBERON:0009497!6.77e-14!22;UBERON:0000015!6.77e-14!22;UBERON:0002423!6.77e-14!22;UBERON:0006235!6.77e-14!22;UBERON:0008835!6.77e-14!22;UBERON:0003894!6.77e-14!22;UBERON:0004161!6.77e-14!22;UBERON:0008836!6.77e-14!22;UBERON:0000077!4.05e-13!97;UBERON:0001041!6.46e-13!92;UBERON:0005177!4.65e-12!85;UBERON:0004921!3.12e-11!126;UBERON:0004185!3.12e-11!126;UBERON:0001007!5.18e-11!128;UBERON:0001555!5.18e-11!128;UBERON:0007026!5.18e-11!128;UBERON:0009569!7.59e-11!66;UBERON:0004119!1.10e-10!130;UBERON:0000925!1.10e-10!130;UBERON:0006595!1.10e-10!130;UBERON:0002100!4.63e-09!98;UBERON:0005911!6.20e-08!69;UBERON:0005153!6.67e-08!17;UBERON:0005256!1.58e-07!47;UBERON:0005178!1.71e-07!17;UBERON:0005181!1.71e-07!17;UBERON:0002224!1.71e-07!17;UBERON:0000915!1.71e-07!17;UBERON:0008947!1.71e-07!17;UBERON:0003258!1.71e-07!17;UBERON:0000464!1.83e-07!57;UBERON:0002048!1.88e-07!14;UBERON:0000117!1.88e-07!14;UBERON:0000171!1.88e-07!14;UBERON:0000170!1.88e-07!14;UBERON:0005597!1.88e-07!14;UBERON:0000118!1.88e-07!14;UBERON:0000949!1.96e-07!72;UBERON:0003104!2.26e-07!131;UBERON:0009142!2.26e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0009854,2.31e-17,23;UBERON:0009856,2.31e-17,23;UBERON:0002107,7.12e-17,22;UBERON:0007499,7.12e-17,22;UBERON:0006925,7.12e-17,22;UBERON:0009497,7.12e-17,22;UBERON:0000015,7.12e-17,22;UBERON:0002423,7.12e-17,22;UBERON:0006235,7.12e-17,22;UBERON:0008835,7.12e-17,22;UBERON:0003894,7.12e-17,22;UBERON:0004161,7.12e-17,22;UBERON:0008836,7.12e-17,22;UBERON:0005177,5.31e-16,79;UBERON:0002365,1.62e-15,25;UBERON:0002330,1.62e-15,25;UBERON:0002100,8.37e-13,90;UBERON:0009569,8.94e-12,66;UBERON:0001041,3.35e-09,80;UBERON:0005911,2.73e-08,69;UBERON:0005256,2.86e-08,45;UBERON:0002048,5.36e-08,14;UBERON:0000117,5.36e-08,14;UBERON:0000171,5.36e-08,14;UBERON:0000170,5.36e-08,14;UBERON:0005597,5.36e-08,14;UBERON:0000118,5.36e-08,14;UBERON:0000949,1.31e-07,72;UBERON:0005178,1.72e-07,17;UBERON:0005181,1.72e-07,17;UBERON:0002224,1.72e-07,17;UBERON:0000915,1.72e-07,17;UBERON:0008947,1.72e-07,17;UBERON:0003258,1.72e-07,17;UBERON:0005153,3.94e-07,17|phase1_expression=0,2.09385244583617,1.36499771816861,0,0,0.16787927191189,0.700837921786577,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,5.69790044012167,0,0,0,0.68822784320151,1.14846392823004,0,0.861884930743556,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0.135005938331691,0,0,0,0,0.191690942036473,0,0,0.127687338085188,0.153606533256243,0,0,0,0.279182999001381,0,0.45839474333043,0,0,0,0,0,7.24661221754194,121.319766654375,107.435470725825,189.975523456512,189.734713894719,193.995642113146,45.5039921226876,0,0,0,0,0,0,0,1.29894624606728,1.01343946190039,0.505524445014783,93.0598619710339,0,0.890652834388949,0.173485326766136,0.304465478312141,1.15307748628029,1.05505848386836,1.29347577849275,2.38766523526383,0.741584903203122,5.92857363371638,0,0,0.441683036920787,0,3.72783522436244,0,0.209446706813455,0.766371165625774,0,0,0,0,0,0,0.347648640384553,0.255715457330331,0,0,0,0.497627882440372,1.76905930903572,95.5406025724592,0,0,0,0.150704817835715,0,0,0,8.2785078636485,0,0,0,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0,0,0,0.164167464079095,0.324275238183423,0,0.219550115291051,0.268412837520744,0.841159794256509,0.205809224758569,0.660837565967596,0,0.213288250535234,0,0.644337306610467,0.80673409849337,0.22237804384487,0.570676878337677,0,0.164698954724011,0.502670417600539,0.198956472041151,0.38992817423824,0,0.432276099749388,0.597423819763102,0.189667900953082,0,0,0,0,0,0,0,0,0,186.17224981073,0.83422552858047,1.57247196090562,2.47348323623339,3.44862206360455,6.75296047306767,9.93040821947537,19.8510334841059,37.9396430653583,35.4184223012625,56.0696005456683,55.0768602549385,65.5279113540577,144.222539307801,84.4961817688206,147.62771753719,45.2645315908181,0.189491411770485,0.814824882210129,2.20668611507745,7.74477819352057,16.7506257441816,15.2347930167049,24.5868396300827,15.6058792665129,14.6166695168191,12.9158362612565,31.1340297959902,22.6217326244323,40.2124382856602,0,0,0.983528546038072,0.551873492609465,0.321101179975584,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,2.41298144854057,0.534196811001766,0.162886959353576,2.3095817216155,17.2568679841952,0.728341908464944,2.41858845571801,3.01768127609437,2.95301892880773,3.68922177532713,1.03371317267288,1.81766864738753,6.06045543254026,4.74055136903724,9.48767477174989,14.4389760547462,32.3417625466099,0,0.129358683782755,0.428674070063185,0,0,1.64549020602121,3.04464949114599,0.23467170806371,0,13.6727606794076,28.855094264759,1.45317984026315,4.52346936961169,11.2210003362948,14.7726809770555,0.291480836629851,0,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0,0,29.5947891584685,0,0,0.324016022465404,1.04544148007234,0.87345025498471,4.85511646985355,9.17453358551229,23.0345228945946,0.129614973291793,18.0188400795208,1.69107881605257,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0,1.5624526181274,0.314578033277133,1.44950472495604,1.72818003754719,0.632022241256357,0,0,0,0,0,0.120195449519969,0.147689527174577,0.403865799792591,0.304827226619999,0,0.194915761479505,0.0962118416403295,0.116876902181569,1.81384306892169,0.665957860122194,0,1.00730769818447,0.579568782096571,0,0.915758121336325,0.643105137237198,1.00314420807073,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0.103787347584177,0.399024873401031,0.170733605754134,1.21553358534147,1.04806581313991,2.5738091183002,4.22268782823069,3.5025959730612,2.24643446714271,3.03236654116557,4.30914809813408,3.58390048633545,3.37109426891577,2.43295579138503,3.10151532360312,4.28664322154766,3.01299247456624,3.08654752741928,2.88460130562315,2.64958056241915,3.77156177623957,4.2594193478241,3.57654284920981,3.34296758254356,4.14081273827455,3.21535509988371,3.84148743032822,4.20911538300549,2.98769050460896,3.92799590160417,3.2031454893527,2.46261205938909,2.86461730218783,3.56354734727722,4.24394544158511,1.74867404556562,4.44470056046276,5.15690529715916,1.91288332068843,2.20591419119516,1.62307484934295|short_description=p1@Sec14l4}} | ||
|EntrezGene=103655 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=Q8R0F9,Q5SQ22 | |||
|association_with_transcript=0bp_to_ENSMUST00000019512,ENSMUST00000131171,ENSMUST00000136222,NM_146013,uc007hue.1_5end | |||
|description=CAGE_peak_1_at_Sec14l4_5end | |||
|id=chr11:3931773..3931836,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!1.39e-18!79;UBERON:0002365!2.65e-14!25;UBERON:0002330!2.65e-14!25;UBERON:0009854!2.94e-14!23;UBERON:0009856!2.94e-14!23;UBERON:0002107!6.77e-14!22;UBERON:0007499!6.77e-14!22;UBERON:0006925!6.77e-14!22;UBERON:0009497!6.77e-14!22;UBERON:0000015!6.77e-14!22;UBERON:0002423!6.77e-14!22;UBERON:0006235!6.77e-14!22;UBERON:0008835!6.77e-14!22;UBERON:0003894!6.77e-14!22;UBERON:0004161!6.77e-14!22;UBERON:0008836!6.77e-14!22;UBERON:0000077!4.05e-13!97;UBERON:0001041!6.46e-13!92;UBERON:0005177!4.65e-12!85;UBERON:0004921!3.12e-11!126;UBERON:0004185!3.12e-11!126;UBERON:0001007!5.18e-11!128;UBERON:0001555!5.18e-11!128;UBERON:0007026!5.18e-11!128;UBERON:0009569!7.59e-11!66;UBERON:0004119!1.10e-10!130;UBERON:0000925!1.10e-10!130;UBERON:0006595!1.10e-10!130;UBERON:0002100!4.63e-09!98;UBERON:0005911!6.20e-08!69;UBERON:0005153!6.67e-08!17;UBERON:0005256!1.58e-07!47;UBERON:0005178!1.71e-07!17;UBERON:0005181!1.71e-07!17;UBERON:0002224!1.71e-07!17;UBERON:0000915!1.71e-07!17;UBERON:0008947!1.71e-07!17;UBERON:0003258!1.71e-07!17;UBERON:0000464!1.83e-07!57;UBERON:0002048!1.88e-07!14;UBERON:0000117!1.88e-07!14;UBERON:0000171!1.88e-07!14;UBERON:0000170!1.88e-07!14;UBERON:0005597!1.88e-07!14;UBERON:0000118!1.88e-07!14;UBERON:0000949!1.96e-07!72;UBERON:0003104!2.26e-07!131;UBERON:0009142!2.26e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,2.31e-17,23;UBERON:0009856,2.31e-17,23;UBERON:0002107,7.12e-17,22;UBERON:0007499,7.12e-17,22;UBERON:0006925,7.12e-17,22;UBERON:0009497,7.12e-17,22;UBERON:0000015,7.12e-17,22;UBERON:0002423,7.12e-17,22;UBERON:0006235,7.12e-17,22;UBERON:0008835,7.12e-17,22;UBERON:0003894,7.12e-17,22;UBERON:0004161,7.12e-17,22;UBERON:0008836,7.12e-17,22;UBERON:0005177,5.31e-16,79;UBERON:0002365,1.62e-15,25;UBERON:0002330,1.62e-15,25;UBERON:0002100,8.37e-13,90;UBERON:0009569,8.94e-12,66;UBERON:0001041,3.35e-09,80;UBERON:0005911,2.73e-08,69;UBERON:0005256,2.86e-08,45;UBERON:0002048,5.36e-08,14;UBERON:0000117,5.36e-08,14;UBERON:0000171,5.36e-08,14;UBERON:0000170,5.36e-08,14;UBERON:0005597,5.36e-08,14;UBERON:0000118,5.36e-08,14;UBERON:0000949,1.31e-07,72;UBERON:0005178,1.72e-07,17;UBERON:0005181,1.72e-07,17;UBERON:0002224,1.72e-07,17;UBERON:0000915,1.72e-07,17;UBERON:0008947,1.72e-07,17;UBERON:0003258,1.72e-07,17;UBERON:0005153,3.94e-07,17 | |||
|phase1_expression=0,2.09385244583617,1.36499771816861,0,0,0.16787927191189,0.700837921786577,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,5.69790044012167,0,0,0,0.68822784320151,1.14846392823004,0,0.861884930743556,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0.135005938331691,0,0,0,0,0.191690942036473,0,0,0.127687338085188,0.153606533256243,0,0,0,0.279182999001381,0,0.45839474333043,0,0,0,0,0,7.24661221754194,121.319766654375,107.435470725825,189.975523456512,189.734713894719,193.995642113146,45.5039921226876,0,0,0,0,0,0,0,1.29894624606728,1.01343946190039,0.505524445014783,93.0598619710339,0,0.890652834388949,0.173485326766136,0.304465478312141,1.15307748628029,1.05505848386836,1.29347577849275,2.38766523526383,0.741584903203122,5.92857363371638,0,0,0.441683036920787,0,3.72783522436244,0,0.209446706813455,0.766371165625774,0,0,0,0,0,0,0.347648640384553,0.255715457330331,0,0,0,0.497627882440372,1.76905930903572,95.5406025724592,0,0,0,0.150704817835715,0,0,0,8.2785078636485,0,0,0,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0,0,0,0.164167464079095,0.324275238183423,0,0.219550115291051,0.268412837520744,0.841159794256509,0.205809224758569,0.660837565967596,0,0.213288250535234,0,0.644337306610467,0.80673409849337,0.22237804384487,0.570676878337677,0,0.164698954724011,0.502670417600539,0.198956472041151,0.38992817423824,0,0.432276099749388,0.597423819763102,0.189667900953082,0,0,0,0,0,0,0,0,0,186.17224981073,0.83422552858047,1.57247196090562,2.47348323623339,3.44862206360455,6.75296047306767,9.93040821947537,19.8510334841059,37.9396430653583,35.4184223012625,56.0696005456683,55.0768602549385,65.5279113540577,144.222539307801,84.4961817688206,147.62771753719,45.2645315908181,0.189491411770485,0.814824882210129,2.20668611507745,7.74477819352057,16.7506257441816,15.2347930167049,24.5868396300827,15.6058792665129,14.6166695168191,12.9158362612565,31.1340297959902,22.6217326244323,40.2124382856602,0,0,0.983528546038072,0.551873492609465,0.321101179975584,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,2.41298144854057,0.534196811001766,0.162886959353576,2.3095817216155,17.2568679841952,0.728341908464944,2.41858845571801,3.01768127609437,2.95301892880773,3.68922177532713,1.03371317267288,1.81766864738753,6.06045543254026,4.74055136903724,9.48767477174989,14.4389760547462,32.3417625466099,0,0.129358683782755,0.428674070063185,0,0,1.64549020602121,3.04464949114599,0.23467170806371,0,13.6727606794076,28.855094264759,1.45317984026315,4.52346936961169,11.2210003362948,14.7726809770555,0.291480836629851,0,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0,0,29.5947891584685,0,0,0.324016022465404,1.04544148007234,0.87345025498471,4.85511646985355,9.17453358551229,23.0345228945946,0.129614973291793,18.0188400795208,1.69107881605257,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0,1.5624526181274,0.314578033277133,1.44950472495604,1.72818003754719,0.632022241256357,0,0,0,0,0,0.120195449519969,0.147689527174577,0.403865799792591,0.304827226619999,0,0.194915761479505,0.0962118416403295,0.116876902181569,1.81384306892169,0.665957860122194,0,1.00730769818447,0.579568782096571,0,0.915758121336325,0.643105137237198,1.00314420807073,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0.103787347584177,0.399024873401031,0.170733605754134,1.21553358534147,1.04806581313991,2.5738091183002,4.22268782823069,3.5025959730612,2.24643446714271,3.03236654116557,4.30914809813408,3.58390048633545,3.37109426891577,2.43295579138503,3.10151532360312,4.28664322154766,3.01299247456624,3.08654752741928,2.88460130562315,2.64958056241915,3.77156177623957,4.2594193478241,3.57654284920981,3.34296758254356,4.14081273827455,3.21535509988371,3.84148743032822,4.20911538300549,2.98769050460896,3.92799590160417,3.2031454893527,2.46261205938909,2.86461730218783,3.56354734727722,4.24394544158511,1.74867404556562,4.44470056046276,5.15690529715916,1.91288332068843,2.20591419119516,1.62307484934295 | |||
|short_description=p1@Sec14l4 | |||
}} |
Revision as of 19:37, 12 September 2013
Short description: | p1@Sec14l4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sec14l4_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000019512, ENSMUST00000131171, ENSMUST00000136222, NM_146013, uc007hue.1_5end |
EntrezGene: | Sec14l4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 2.31e-17 | 23 |
sac | 2.31e-17 | 23 |
liver | 7.12e-17 | 22 |
epithelial sac | 7.12e-17 | 22 |
digestive gland | 7.12e-17 | 22 |
epithelium of foregut-midgut junction | 7.12e-17 | 22 |
anatomical boundary | 7.12e-17 | 22 |
hepatobiliary system | 7.12e-17 | 22 |
foregut-midgut junction | 7.12e-17 | 22 |
hepatic diverticulum | 7.12e-17 | 22 |
liver primordium | 7.12e-17 | 22 |
septum transversum | 7.12e-17 | 22 |
liver bud | 7.12e-17 | 22 |
trunk region element | 5.31e-16 | 79 |
exocrine gland | 1.62e-15 | 25 |
exocrine system | 1.62e-15 | 25 |
trunk | 8.37e-13 | 90 |
subdivision of trunk | 8.94e-12 | 66 |
foregut | 3.35e-09 | 80 |
endo-epithelium | 2.73e-08 | 69 |
trunk mesenchyme | 2.86e-08 | 45 |
lung | 5.36e-08 | 14 |
respiratory tube | 5.36e-08 | 14 |
respiration organ | 5.36e-08 | 14 |
pair of lungs | 5.36e-08 | 14 |
lung primordium | 5.36e-08 | 14 |
lung bud | 5.36e-08 | 14 |
endocrine system | 1.31e-07 | 72 |
thoracic cavity element | 1.72e-07 | 17 |
thoracic segment organ | 1.72e-07 | 17 |
thoracic cavity | 1.72e-07 | 17 |
thoracic segment of trunk | 1.72e-07 | 17 |
respiratory primordium | 1.72e-07 | 17 |
endoderm of foregut | 1.72e-07 | 17 |
epithelial bud | 3.94e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.