FFCP PHASE1:Hg19::chr2:72742849..72742865,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23233|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17085|TSSclassifier=S|UniProt=|association_with_transcript=17bp_to_ENST00000485398_5end|coexpression_cluster_id=C63|description=CAGE_peak_9_at_EXOC6B_5end|id=chr2:72742849..72742865,-|ontology_enrichment_celltype=CL:0002274!2.01e-14!5;CL:0000457!2.01e-14!5;CL:0002191!2.01e-14!5;CL:0000097!2.01e-14!5;CL:0000831!2.01e-14!5;CL:0002028!2.01e-14!5;CL:0000163!8.46e-08!9|ontology_enrichment_celltype_v019=CL:0000097;2.71e-36;5!CL:0002594;1.41e-20;4!CL:0000163;1.57e-20;9|ontology_enrichment_celltype_v019_2=CL:0000097,2.88e-36,5;CL:0002028,2.88e-36,5;CL:0002594,1.56e-20,4;CL:0000163,1.62e-20,9|ontology_enrichment_development_v019=UBERON:0005425;6.31e-21;1!UBERON:0003056;7.26e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2513;3.12e-21;1!DOID:3451;2.60e-11;2!DOID:4159;2.60e-11;2!DOID:0060122;2.60e-11;2!DOID:171;4.94e-09;10|ontology_enrichment_disease_v019_2=DOID:2513,3.45e-21,1;DOID:3451,2.73e-11,2;DOID:4159,2.73e-11,2;DOID:0060122,2.73e-11,2;DOID:171,4.94e-09,10|ontology_enrichment_uberon=UBERON:0001049!7.06e-21!57;UBERON:0005068!7.06e-21!57;UBERON:0006241!7.06e-21!57;UBERON:0007135!7.06e-21!57;UBERON:0007023!1.67e-20!115;UBERON:0002346!6.96e-19!90;UBERON:0000955!7.92e-19!69;UBERON:0006238!7.92e-19!69;UBERON:0002616!3.61e-18!59;UBERON:0001893!2.12e-17!34;UBERON:0001017!3.52e-16!82;UBERON:0002791!6.38e-16!33;UBERON:0002780!1.68e-15!41;UBERON:0001890!1.68e-15!41;UBERON:0006240!1.68e-15!41;UBERON:0003075!2.15e-15!86;UBERON:0007284!2.15e-15!86;UBERON:0002020!3.37e-15!34;UBERON:0003528!3.37e-15!34;UBERON:0005743!4.12e-15!86;UBERON:0003080!4.97e-15!42;UBERON:0000073!2.33e-14!94;UBERON:0001016!2.33e-14!94;UBERON:0001869!3.42e-14!32;UBERON:0000200!7.95e-11!6;UBERON:0003056!3.34e-10!61;UBERON:0002308!4.31e-10!9;UBERON:0000125!4.31e-10!9;UBERON:0009663!1.54e-09!7;UBERON:0000924!1.65e-09!173;UBERON:0006601!1.65e-09!173;UBERON:0002619!2.16e-09!22;UBERON:0000033!2.30e-09!123;UBERON:0002771!5.05e-09!3;UBERON:0000153!1.27e-08!129;UBERON:0007811!1.27e-08!129;UBERON:0004732!1.31e-08!13;UBERON:0001950!1.55e-08!20;UBERON:0000025!1.90e-08!194;UBERON:0000956!4.51e-08!25;UBERON:0000203!4.51e-08!25;UBERON:0002298!1.53e-07!8;UBERON:0004121!1.55e-07!169;UBERON:0002420!2.53e-07!9;UBERON:0007245!2.53e-07!9;UBERON:0010009!2.53e-07!9;UBERON:0010011!2.53e-07!9;UBERON:0000454!2.53e-07!9;UBERON:0003076!3.98e-07!15;UBERON:0003057!3.98e-07!15;UBERON:0001875!5.80e-07!2;UBERON:0006514!5.80e-07!2;UBERON:0004733!8.65e-07!12;UBERON:0002028!8.65e-07!12;UBERON:0007277!8.65e-07!12|ontology_enrichment_uberon_v019=UBERON:0002346;4.23e-21;4!UBERON:0000923;4.23e-21;4!UBERON:0010316;4.23e-21;4!UBERON:0005291;4.23e-21;4!UBERON:0000941;6.31e-21;1!UBERON:0001785;6.31e-21;1!UBERON:0002464;6.31e-21;1!UBERON:0004904;6.31e-21;1!UBERON:0001021;6.31e-21;1!UBERON:0001310;1.41e-20;4!UBERON:0002050;4.28e-17;5!UBERON:0005423;4.28e-17;5!UBERON:0003714;3.70e-11;2!UBERON:0001875;3.70e-11;2!UBERON:0005162;3.70e-11;2!UBERON:0000122;3.70e-11;2!UBERON:0006514;3.70e-11;2!UBERON:0010260;1.05e-09;9|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.22e-21,1;UBERON:0001785,4.22e-21,1;UBERON:0002464,4.22e-21,1;UBERON:0004904,4.22e-21,1;UBERON:0001021,4.22e-21,1;UBERON:0003902,4.22e-21,1;UBERON:0005425,4.22e-21,1;UBERON:0001310,1.56e-20,4;UBERON:0003714,3.02e-11,2;UBERON:0005162,3.02e-11,2;UBERON:0000122,3.02e-11,2;UBERON:0001875,3.70e-11,2;UBERON:0006514,3.70e-11,2;UBERON:0010260,1.10e-09,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0,0,0.257640540045629,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3312544716067,2.90559832243646,0.621984346622316,0.144119953416961,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0.473107245101804,0.819989904948992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21746226177622,0,0,0,0,1.07001315444375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23233 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17085 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=17bp_to_ENST00000485398_5end | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_9_at_EXOC6B_5end | |||
|id=chr2:72742849..72742865,- | |||
|ontology_enrichment_celltype=CL:0002274!2.01e-14!5;CL:0000457!2.01e-14!5;CL:0002191!2.01e-14!5;CL:0000097!2.01e-14!5;CL:0000831!2.01e-14!5;CL:0002028!2.01e-14!5;CL:0000163!8.46e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.71e-36;5!CL:0002594;1.41e-20;4!CL:0000163;1.57e-20;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.88e-36,5;CL:0002028,2.88e-36,5;CL:0002594,1.56e-20,4;CL:0000163,1.62e-20,9 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.31e-21;1!UBERON:0003056;7.26e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;3.12e-21;1!DOID:3451;2.60e-11;2!DOID:4159;2.60e-11;2!DOID:0060122;2.60e-11;2!DOID:171;4.94e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,3.45e-21,1;DOID:3451,2.73e-11,2;DOID:4159,2.73e-11,2;DOID:0060122,2.73e-11,2;DOID:171,4.94e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.06e-21!57;UBERON:0005068!7.06e-21!57;UBERON:0006241!7.06e-21!57;UBERON:0007135!7.06e-21!57;UBERON:0007023!1.67e-20!115;UBERON:0002346!6.96e-19!90;UBERON:0000955!7.92e-19!69;UBERON:0006238!7.92e-19!69;UBERON:0002616!3.61e-18!59;UBERON:0001893!2.12e-17!34;UBERON:0001017!3.52e-16!82;UBERON:0002791!6.38e-16!33;UBERON:0002780!1.68e-15!41;UBERON:0001890!1.68e-15!41;UBERON:0006240!1.68e-15!41;UBERON:0003075!2.15e-15!86;UBERON:0007284!2.15e-15!86;UBERON:0002020!3.37e-15!34;UBERON:0003528!3.37e-15!34;UBERON:0005743!4.12e-15!86;UBERON:0003080!4.97e-15!42;UBERON:0000073!2.33e-14!94;UBERON:0001016!2.33e-14!94;UBERON:0001869!3.42e-14!32;UBERON:0000200!7.95e-11!6;UBERON:0003056!3.34e-10!61;UBERON:0002308!4.31e-10!9;UBERON:0000125!4.31e-10!9;UBERON:0009663!1.54e-09!7;UBERON:0000924!1.65e-09!173;UBERON:0006601!1.65e-09!173;UBERON:0002619!2.16e-09!22;UBERON:0000033!2.30e-09!123;UBERON:0002771!5.05e-09!3;UBERON:0000153!1.27e-08!129;UBERON:0007811!1.27e-08!129;UBERON:0004732!1.31e-08!13;UBERON:0001950!1.55e-08!20;UBERON:0000025!1.90e-08!194;UBERON:0000956!4.51e-08!25;UBERON:0000203!4.51e-08!25;UBERON:0002298!1.53e-07!8;UBERON:0004121!1.55e-07!169;UBERON:0002420!2.53e-07!9;UBERON:0007245!2.53e-07!9;UBERON:0010009!2.53e-07!9;UBERON:0010011!2.53e-07!9;UBERON:0000454!2.53e-07!9;UBERON:0003076!3.98e-07!15;UBERON:0003057!3.98e-07!15;UBERON:0001875!5.80e-07!2;UBERON:0006514!5.80e-07!2;UBERON:0004733!8.65e-07!12;UBERON:0002028!8.65e-07!12;UBERON:0007277!8.65e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;4.23e-21;4!UBERON:0000923;4.23e-21;4!UBERON:0010316;4.23e-21;4!UBERON:0005291;4.23e-21;4!UBERON:0000941;6.31e-21;1!UBERON:0001785;6.31e-21;1!UBERON:0002464;6.31e-21;1!UBERON:0004904;6.31e-21;1!UBERON:0001021;6.31e-21;1!UBERON:0001310;1.41e-20;4!UBERON:0002050;4.28e-17;5!UBERON:0005423;4.28e-17;5!UBERON:0003714;3.70e-11;2!UBERON:0001875;3.70e-11;2!UBERON:0005162;3.70e-11;2!UBERON:0000122;3.70e-11;2!UBERON:0006514;3.70e-11;2!UBERON:0010260;1.05e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.22e-21,1;UBERON:0001785,4.22e-21,1;UBERON:0002464,4.22e-21,1;UBERON:0004904,4.22e-21,1;UBERON:0001021,4.22e-21,1;UBERON:0003902,4.22e-21,1;UBERON:0005425,4.22e-21,1;UBERON:0001310,1.56e-20,4;UBERON:0003714,3.02e-11,2;UBERON:0005162,3.02e-11,2;UBERON:0000122,3.02e-11,2;UBERON:0001875,3.70e-11,2;UBERON:0006514,3.70e-11,2;UBERON:0010260,1.10e-09,9 | |||
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|short_description=p9@EXOC6B | |||
}} |
Revision as of 19:41, 12 September 2013
Short description: | p9@EXOC6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_EXOC6B_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | 17bp_to_ENST00000485398_5end |
EntrezGene: | EXOC6B |
HGNC: | 17085 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.88e-36 | 5 |
basophil mast progenitor cell | 2.88e-36 | 5 |
smooth muscle cell of the umbilical artery | 1.56e-20 | 4 |
endocrine cell | 1.62e-20 | 9 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.22e-21 | 1 |
cranial nerve | 4.22e-21 | 1 |
nerve trunk | 4.22e-21 | 1 |
nerve connecting eye with brain | 4.22e-21 | 1 |
nerve | 4.22e-21 | 1 |
retinal neural layer | 4.22e-21 | 1 |
presumptive neural retina | 4.22e-21 | 1 |
umbilical artery | 1.56e-20 | 4 |
neural tissue | 3.02e-11 | 2 |
multi cell component structure | 3.02e-11 | 2 |
neuron projection bundle | 3.02e-11 | 2 |
globus pallidus | 3.70e-11 | 2 |
pallidum | 3.70e-11 | 2 |
umbilical blood vessel | 1.10e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 3.45e-21 | 1 |
skin carcinoma | 2.73e-11 | 2 |
skin cancer | 2.73e-11 | 2 |
integumentary system cancer | 2.73e-11 | 2 |
neuroectodermal tumor | 4.94e-09 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.