FFCP PHASE1:Mm9::chr11:6376164..6376178,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:6376164..6376178,+|id=chr11:6376164..6376178,+|ontology_enrichment_celltype=CL:0000144!1.84e-08!121;CL:0000012!1.84e-08!121;CL:0002371!1.64e-07!118|ontology_enrichment_celltype_v019_2=CL:0000791,3.01e-12,9;CL:0000789,3.01e-12,9;CL:0002420,3.01e-12,9;CL:0002419,3.01e-12,9;CL:0000790,3.01e-12,9;CL:0000624,1.90e-11,8;CL:0000838,6.99e-11,12;CL:0000034,7.16e-11,97;CL:0000542,7.74e-10,13;CL:0000051,7.74e-10,13;CL:0000723,8.53e-10,91;CL:0000048,8.53e-10,91;CL:0000084,1.34e-09,11;CL:0000827,1.34e-09,11;CL:0002563,2.31e-09,9;CL:0002251,2.31e-09,9;CL:0000893,2.75e-09,6;CL:0002489,2.75e-09,6;CL:0000898,2.75e-09,6;CL:0000809,2.75e-09,6;CL:0000810,2.75e-09,6;CL:0000895,2.75e-09,6;CL:0000808,2.75e-09,6;CL:0000894,2.75e-09,6;CL:0000806,2.75e-09,6;CL:0000807,2.75e-09,6;CL:0000805,2.75e-09,6;CL:0002425,2.75e-09,6;CL:0002436,2.75e-09,6;CL:0002427,2.75e-09,6;CL:0002428,2.75e-09,6;CL:0002429,2.75e-09,6;CL:0002433,2.75e-09,6;CL:0002431,2.75e-09,6;CL:0002432,2.75e-09,6;CL:0000738,6.47e-07,17;CL:0002087,6.47e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.05e-09!73;UBERON:0005743!1.05e-09!73;UBERON:0000073!5.83e-09!75;UBERON:0001016!5.83e-09!75;UBERON:0002346!5.08e-07!71;UBERON:0003075!5.08e-07!71;UBERON:0007284!5.08e-07!71;UBERON:0000033!5.13e-07!63;UBERON:0000955!7.16e-07!50;UBERON:0006238!7.16e-07!50;UBERON:0004121!8.50e-07!102;UBERON:0000924!8.50e-07!102;UBERON:0006601!8.50e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.31e-09,9;UBERON:0004808,2.31e-09,9;UBERON:0001277,2.31e-09,9;UBERON:0000485,4.83e-09,11|phase1_expression=1.28119077683835,0.697950815278722,1.81999695755814,2.11724947914781,2.50447864973174,2.35030980676646,1.16806320297763,3.09895976259783,6.61706994112834,3.5109678948299,3.93801326918661,2.31339261086476,3.25281386869291,1.83582845079895,0,0,0,0,0.411343300817216,0.84877930359606,0.680346321208558,0.496454756004426,0,0,0.22940928106717,1.14846392823004,0.430761996159075,1.50829862880122,0.190023419456374,0.504060259519861,0.886922042621219,5.08024538767705,1.84519436275371,0,6.06588401477677,1.82858109894342,4.08338712524738,6.27797446105362,2.3440060335714,2.09409497589519,21.7645650571475,3.41522742479223,3.88408282424923,0.503587271902309,1.4192770370732,0.367093504323363,0.782391344348039,0.872100625521786,1.09843091367236,0.972149495371417,0.279972843250725,2.87505128729943,3.52343472721246,1.45072428402269,1.34437519656986,0.514518872071894,0,0,0.606949382578793,0.528990979272033,1.90149421051854,1.0165335962074,0.889294796111139,0,0,0,0.599200221036809,0.384218305321555,0.518448061542388,0.810035629990144,1.47227472945967,0,0.441737081903227,0.489963196859816,0.766763768145891,1.83843757322004,0,0.383062014255563,0.307213066512487,0.659431438650969,0.548925861614458,0.52091337055676,2.23346399201105,1.68828783009504,0.61119299110724,0.294628585473668,0.427115042397309,0.372798891650601,0.075726193333184,0.226714680320357,5.50742528533188,2.58127163094416,0.679971333707751,0,0,0.448026887097336,0.561777680527007,0,0.519572009205738,0,0.845060518660083,0,0,0,0.649473123033642,0,2.02209778005913,0.45673551887624,1.03575153458869,0.148442139064825,0.173485326766136,0.913396434936424,1.15307748628029,0.60289056221049,0.352766121407114,0.376999773989026,0.988779870937496,0.578397427679647,0,0.323533699894818,0.220841518460394,0.484875253135222,0,0.878342391034642,1.04723353406728,0,1.07833612055328,2.39961092397363,0.889491589511453,0.898743836428936,0.915001205637253,1.25654352112864,0.173824320192276,0.511430914660661,1.0389402227978,0.811206315338788,0.203678727700633,0.248813941220186,0,0.841767423545896,0.260240885925407,0.689706313300419,0.540186389416048,0.90422890701429,0.408218994907967,0.896796041993948,0.562210347358373,0,0.431135985865684,0.378212160335639,0,0.876782929710299,0.556094498451196,0.696504333044333,0,0.59710280045548,0,0.51469581422943,0,0.621377317606506,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0,0.232533944750408,0,0.700592054203017,0.329119699826961,0.164167464079095,0.243206428637567,0.584799949701329,0.439100230582101,0.268412837520744,0.630869845692382,0.411618449517138,0.330418782983798,0,0.213288250535234,0.232236671860439,0.38660238396628,0.201683524623343,0,0.190225626112559,1.42358718463353,0.164698954724011,0.502670417600539,0.198956472041151,0.19496408711912,0.898819408654221,0.648414149624083,0.199141273254367,1.13800740571849,0.342745537829186,0,0.203651327845314,0.193952487167626,0.280543279561274,0.0632365371242573,0.147610147979602,0.470996183524124,0.616985819609003,0,0.333690211432188,0.196558995113203,0.449724224769707,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0,0,0.184753190166605,0.37898282354097,0.162964976442026,0,0.469380496577004,0.167506257441816,0.476087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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:6376164..6376178,+ | |||
|id=chr11:6376164..6376178,+ | |||
|ontology_enrichment_celltype=CL:0000144!1.84e-08!121;CL:0000012!1.84e-08!121;CL:0002371!1.64e-07!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.01e-12,9;CL:0000789,3.01e-12,9;CL:0002420,3.01e-12,9;CL:0002419,3.01e-12,9;CL:0000790,3.01e-12,9;CL:0000624,1.90e-11,8;CL:0000838,6.99e-11,12;CL:0000034,7.16e-11,97;CL:0000542,7.74e-10,13;CL:0000051,7.74e-10,13;CL:0000723,8.53e-10,91;CL:0000048,8.53e-10,91;CL:0000084,1.34e-09,11;CL:0000827,1.34e-09,11;CL:0002563,2.31e-09,9;CL:0002251,2.31e-09,9;CL:0000893,2.75e-09,6;CL:0002489,2.75e-09,6;CL:0000898,2.75e-09,6;CL:0000809,2.75e-09,6;CL:0000810,2.75e-09,6;CL:0000895,2.75e-09,6;CL:0000808,2.75e-09,6;CL:0000894,2.75e-09,6;CL:0000806,2.75e-09,6;CL:0000807,2.75e-09,6;CL:0000805,2.75e-09,6;CL:0002425,2.75e-09,6;CL:0002436,2.75e-09,6;CL:0002427,2.75e-09,6;CL:0002428,2.75e-09,6;CL:0002429,2.75e-09,6;CL:0002433,2.75e-09,6;CL:0002431,2.75e-09,6;CL:0002432,2.75e-09,6;CL:0000738,6.47e-07,17;CL:0002087,6.47e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.05e-09!73;UBERON:0005743!1.05e-09!73;UBERON:0000073!5.83e-09!75;UBERON:0001016!5.83e-09!75;UBERON:0002346!5.08e-07!71;UBERON:0003075!5.08e-07!71;UBERON:0007284!5.08e-07!71;UBERON:0000033!5.13e-07!63;UBERON:0000955!7.16e-07!50;UBERON:0006238!7.16e-07!50;UBERON:0004121!8.50e-07!102;UBERON:0000924!8.50e-07!102;UBERON:0006601!8.50e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.31e-09,9;UBERON:0004808,2.31e-09,9;UBERON:0001277,2.31e-09,9;UBERON:0000485,4.83e-09,11 | |||
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| |||
|short_description=p@chr11:6376164..6376178,+ | |||
}} | |||
Revision as of 20:20, 12 September 2013
| Short description: | p@chr11:6376164..6376178, + |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr11:6376164..6376178, + |
| Coexpression cluster: | MCL_coexpression_mm9:6 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelium of mucosa | 2.31e-09 | 9 |
| gastrointestinal system epithelium | 2.31e-09 | 9 |
| intestinal epithelium | 2.31e-09 | 9 |
| simple columnar epithelium | 4.83e-09 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
