FFCP PHASE1:Mm9::chr11:70040791..70040799,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=76|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:70040791..70040799,-|id=chr11:70040791..70040799,-|ontology_enrichment_celltype=CL:0002609!8.02e-12!6|ontology_enrichment_celltype_v019_2=CL:0002609,4.33e-33,6;CL:0000117,2.33e-09,23;CL:0000337,2.33e-09,23;CL:0000540,9.01e-07,33;CL:0000047,9.01e-07,33;CL:0000031,9.01e-07,33;CL:0000404,9.01e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000956!1.39e-09!21;UBERON:0001869!1.39e-09!21;UBERON:0000203!1.39e-09!21;UBERON:0002791!4.73e-08!29;UBERON:0003528!4.73e-08!29;UBERON:0001893!4.73e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.25e-17,21;UBERON:0001869,2.25e-17,21;UBERON:0000203,2.25e-17,21;UBERON:0003528,7.80e-13,29;UBERON:0002791,7.80e-13,29;UBERON:0001893,7.80e-13,29;UBERON:0002020,4.50e-11,34;UBERON:0002780,9.26e-10,39;UBERON:0001890,9.26e-10,39;UBERON:0006240,9.26e-10,39;UBERON:0003080,1.55e-09,40;UBERON:0002616,2.15e-08,46;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0003056,6.29e-08,49;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45165457231869,2.16009501330705,1.89292465216244,0,0,0.367472397644862,0.287536413054709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502617408451458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0,0,0,0,0.134206418760372,0,3.80747065803352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0,0,0.188626341386076,0,0,0.17230640686684,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0,0,0.436039249896986,0.0941093804153306,0.0846146078916765,0.548783918618318,0,0.135804113845862,0,0,0.197008964751127,0.409231043169689,0.464810523557898,0,0.249810577937946,0.467863216890817,0,0,0,0|short_description=p@chr11:70040791..70040799,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:70040791..70040799,- | |||
|id=chr11:70040791..70040799,- | |||
|ontology_enrichment_celltype=CL:0002609!8.02e-12!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,4.33e-33,6;CL:0000117,2.33e-09,23;CL:0000337,2.33e-09,23;CL:0000540,9.01e-07,33;CL:0000047,9.01e-07,33;CL:0000031,9.01e-07,33;CL:0000404,9.01e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!1.39e-09!21;UBERON:0001869!1.39e-09!21;UBERON:0000203!1.39e-09!21;UBERON:0002791!4.73e-08!29;UBERON:0003528!4.73e-08!29;UBERON:0001893!4.73e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.25e-17,21;UBERON:0001869,2.25e-17,21;UBERON:0000203,2.25e-17,21;UBERON:0003528,7.80e-13,29;UBERON:0002791,7.80e-13,29;UBERON:0001893,7.80e-13,29;UBERON:0002020,4.50e-11,34;UBERON:0002780,9.26e-10,39;UBERON:0001890,9.26e-10,39;UBERON:0006240,9.26e-10,39;UBERON:0003080,1.55e-09,40;UBERON:0002616,2.15e-08,46;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0003056,6.29e-08,49;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45165457231869,2.16009501330705,1.89292465216244,0,0,0.367472397644862,0.287536413054709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502617408451458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0,0,0,0,0.134206418760372,0,3.80747065803352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0,0,0.188626341386076,0,0,0.17230640686684,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0,0,0.436039249896986,0.0941093804153306,0.0846146078916765,0.548783918618318,0,0.135804113845862,0,0,0.197008964751127,0.409231043169689,0.464810523557898,0,0.249810577937946,0.467863216890817,0,0,0,0 | |||
|short_description=p@chr11:70040791..70040799,- | |||
}} |
Revision as of 20:43, 12 September 2013
Short description: | p@chr11:70040791..70040799, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:70040791..70040799, - |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 4.33e-33 | 6 |
CNS neuron (sensu Vertebrata) | 2.33e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.33e-09 | 23 |
neuron | 9.01e-07 | 33 |
neuronal stem cell | 9.01e-07 | 33 |
neuroblast | 9.01e-07 | 33 |
electrically signaling cell | 9.01e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 2.25e-17 | 21 |
cerebral hemisphere | 2.25e-17 | 21 |
pallium | 2.25e-17 | 21 |
brain grey matter | 7.80e-13 | 29 |
regional part of telencephalon | 7.80e-13 | 29 |
telencephalon | 7.80e-13 | 29 |
gray matter | 4.50e-11 | 34 |
regional part of forebrain | 9.26e-10 | 39 |
forebrain | 9.26e-10 | 39 |
future forebrain | 9.26e-10 | 39 |
anterior neural tube | 1.55e-09 | 40 |
regional part of brain | 2.15e-08 | 46 |
brain | 3.12e-08 | 47 |
future brain | 3.12e-08 | 47 |
pre-chordal neural plate | 6.29e-08 | 49 |
neural tube | 1.63e-07 | 52 |
neural rod | 1.63e-07 | 52 |
future spinal cord | 1.63e-07 | 52 |
neural keel | 1.63e-07 | 52 |
regional part of nervous system | 2.91e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.