FFCP PHASE1:Mm9::chr11:88785582..88785590,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=67|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:88785582..88785590,-|id=chr11:88785582..88785590,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002476,2.75e-44,2;CL:0002194,8.43e-23,4;CL:0000766,8.43e-23,4;CL:0000234,8.43e-23,4;CL:0000576,8.43e-23,4;CL:0000235,8.43e-23,4;CL:0000864,8.43e-23,4;CL:0002009,8.43e-23,4;CL:0000040,8.43e-23,4;CL:0000559,8.43e-23,4;CL:0000473,1.55e-13,7;CL:0000557,1.55e-13,7;CL:0000192,1.34e-08,3;CL:0000359,1.34e-08,3;CL:0002539,1.34e-08,3;CL:0000514,1.34e-08,3;CL:0000839,8.98e-08,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000474!2.19e-09!9;UBERON:0003134!6.11e-09!8;UBERON:0003133!2.34e-08!24;UBERON:0005156!2.51e-08!26;UBERON:0000990!2.51e-08!26;UBERON:0003100!2.93e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.34e-08,3;UBERON:0004237,1.34e-08,3;UBERON:0004695,1.34e-08,3;UBERON:0002111,1.34e-08,3;UBERON:0004178,1.34e-08,3;UBERON:0002204,5.08e-07,32;UBERON:0000947,9.17e-07,4;UBERON:0001637,9.17e-07,4;UBERON:0004573,9.17e-07,4;UBERON:0003509,9.17e-07,4;UBERON:0004571,9.17e-07,4;UBERON:0010191,9.17e-07,4;UBERON:0004572,9.17e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,1.72340783073175,0.734187008646726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899899717281399,0.988866362566974,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0.539703191637817,0,0,0,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.29688427812965,0,0,0,0.301445281105245,0.352766121407114,0,0.494389935468748,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0.136072998302656,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0,0.201683524623343,0,0,0,0.329397909448022,0.502670417600539,1.39269530428806,0.38992817423824,0.898819408654221,0.216138049874694,0.199141273254367,0.379335801906163,0,0,0,0,0.49095073923223,0.189709611372772,0.590440591918409,0,0.493588655687202,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0.482443521363367,0,0,0.162964976442026,0,0,0.167506257441816,0,0.390267295715598,0,0,0.159454768657487,0,0,0.289298117163023,4.52373851817817,1.63171705145613,0,0,0.160550589987792,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.488660878060728,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0.938686832254841,0.21183207086382,0,0,0,0.0603129249281559,0.238744688006273,0,0.291480836629851,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.387479470433193,0.337912250981556,0,0,0.314578033277133,0.241584120826006,0.288030006257865,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.750729901804728,0.73260649706906,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421|short_description=p@chr11:88785582..88785590,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=67 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:88785582..88785590,- | |||
|id=chr11:88785582..88785590,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,2.75e-44,2;CL:0002194,8.43e-23,4;CL:0000766,8.43e-23,4;CL:0000234,8.43e-23,4;CL:0000576,8.43e-23,4;CL:0000235,8.43e-23,4;CL:0000864,8.43e-23,4;CL:0002009,8.43e-23,4;CL:0000040,8.43e-23,4;CL:0000559,8.43e-23,4;CL:0000473,1.55e-13,7;CL:0000557,1.55e-13,7;CL:0000192,1.34e-08,3;CL:0000359,1.34e-08,3;CL:0002539,1.34e-08,3;CL:0000514,1.34e-08,3;CL:0000839,8.98e-08,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000474!2.19e-09!9;UBERON:0003134!6.11e-09!8;UBERON:0003133!2.34e-08!24;UBERON:0005156!2.51e-08!26;UBERON:0000990!2.51e-08!26;UBERON:0003100!2.93e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.34e-08,3;UBERON:0004237,1.34e-08,3;UBERON:0004695,1.34e-08,3;UBERON:0002111,1.34e-08,3;UBERON:0004178,1.34e-08,3;UBERON:0002204,5.08e-07,32;UBERON:0000947,9.17e-07,4;UBERON:0001637,9.17e-07,4;UBERON:0004573,9.17e-07,4;UBERON:0003509,9.17e-07,4;UBERON:0004571,9.17e-07,4;UBERON:0010191,9.17e-07,4;UBERON:0004572,9.17e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,1.72340783073175,0.734187008646726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899899717281399,0.988866362566974,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0.539703191637817,0,0,0,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.29688427812965,0,0,0,0.301445281105245,0.352766121407114,0,0.494389935468748,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0.136072998302656,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0,0.201683524623343,0,0,0,0.329397909448022,0.502670417600539,1.39269530428806,0.38992817423824,0.898819408654221,0.216138049874694,0.199141273254367,0.379335801906163,0,0,0,0,0.49095073923223,0.189709611372772,0.590440591918409,0,0.493588655687202,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0.482443521363367,0,0,0.162964976442026,0,0,0.167506257441816,0,0.390267295715598,0,0,0.159454768657487,0,0,0.289298117163023,4.52373851817817,1.63171705145613,0,0,0.160550589987792,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.488660878060728,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0.938686832254841,0.21183207086382,0,0,0,0.0603129249281559,0.238744688006273,0,0.291480836629851,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.387479470433193,0.337912250981556,0,0,0.314578033277133,0.241584120826006,0.288030006257865,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.750729901804728,0.73260649706906,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p@chr11:88785582..88785590,- | |||
}} |
Revision as of 21:25, 12 September 2013
Short description: | p@chr11:88785582..88785590, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:88785582..88785590, - |
Coexpression cluster: | MCL_coexpression_mm9:67 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 2.75e-44 | 2 |
monopoietic cell | 8.43e-23 | 4 |
myeloid leukocyte | 8.43e-23 | 4 |
phagocyte | 8.43e-23 | 4 |
monocyte | 8.43e-23 | 4 |
macrophage | 8.43e-23 | 4 |
tissue-resident macrophage | 8.43e-23 | 4 |
macrophage dendritic cell progenitor | 8.43e-23 | 4 |
monoblast | 8.43e-23 | 4 |
promonocyte | 8.43e-23 | 4 |
defensive cell | 1.55e-13 | 7 |
granulocyte monocyte progenitor cell | 1.55e-13 | 7 |
smooth muscle cell | 1.34e-08 | 3 |
vascular associated smooth muscle cell | 1.34e-08 | 3 |
aortic smooth muscle cell | 1.34e-08 | 3 |
smooth muscle myoblast | 1.34e-08 | 3 |
myeloid lineage restricted progenitor cell | 8.98e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 1.34e-08 | 3 |
blood vessel smooth muscle | 1.34e-08 | 3 |
arterial system smooth muscle | 1.34e-08 | 3 |
artery smooth muscle tissue | 1.34e-08 | 3 |
aorta smooth muscle tissue | 1.34e-08 | 3 |
musculoskeletal system | 5.08e-07 | 32 |
aorta | 9.17e-07 | 4 |
artery | 9.17e-07 | 4 |
systemic artery | 9.17e-07 | 4 |
arterial blood vessel | 9.17e-07 | 4 |
systemic arterial system | 9.17e-07 | 4 |
aortic system | 9.17e-07 | 4 |
arterial system | 9.17e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.