FFCP PHASE1:Mm9::chr11:97847698..97847786,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72324|HGNC=|MCL_coexpression_id=113|UniProt=Q91ZV7,A2A539|association_with_transcript=0bp_to_ENSMUST00000017561,ENSMUST00000107564,ENSMUST00000107565,ENSMUST00000141708,NM_001163608,NM_028199,uc007lfc.2,uc011ydx.1_5end|description=CAGE_peak_1_at_Plxdc1_5end|id=chr11:97847698..97847786,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.73e-08,120;UBERON:0004120,1.73e-08,120;UBERON:0006603,1.73e-08,120|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0,0,0.387369970324729,0.140788722151667,0.234064526321993,0,0,0,0.174840804837995,3.99731714178795,1.21485160433896,3.49780939064073,2.20823515750766,1.7824876368746,2.12194825899015,9.0145887560134,1.09220046320974,0.261199789138935,0.159992422793407,0.45881856213434,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0.408338712524738,2.09265815368454,2.3440060335714,1.0470474879476,0,0,2.42755176515577,4.15459499319405,4.76471576731718,0.367093504323363,0,1.74420125104357,3.07560655828261,1.55543919259427,3.21968769738334,15.8127820801469,0.335565212115473,0.725362142011344,0.672187598284928,0.257259436035947,0.286533439938757,0.515672092277442,0.202316460859598,0,0,0.677689064138264,0.889294796111139,34.6461391153339,44.4989863155138,36.9449659771972,13.4820049733282,14.6002956022191,0.311068836925433,0.135005938331691,0,4.57041575046086,3.09215957332259,0.367472397644862,0,0.919218786610021,23.1243350098716,26.3035916455487,12.7493422602682,0.791317726381163,0.548925861614458,0.52091337055676,13.6799669510677,11.8180148106653,10.0846843532695,4.41942878210502,2.27794689278565,0.559198337475902,0.681535739998656,0.982430281388212,4.92769630792852,6.0229671388697,0,0,0.649776417447669,0,4.63466586434781,0.852151612890289,1.29893002301434,0.70667914902068,0,0,0,0,0,0,0,2.96878087269556,4.66088190564909,11.4300447079915,3.64319186208885,3.04465478312141,4.38169444786511,4.82312449768392,3.88042733547826,6.6603293404728,0.247194967734374,1.73519228303894,7.96149496754887,4.52947179852746,11.2629174414801,8.24287930329878,0,30.7419836862124,44.8215952580794,2.29911349687732,0.958520996047362,1.79970819298022,1.65191295194984,18.7238299256028,18.3000241127451,1.7591609295801,24.6830534673033,19.6900902144355,23.4800490352303,19.9556753573342,2.64782346010822,8.58408097209642,8.59257378674494,4.41927897361595,0.130120442962704,0.919608417733892,1.98068342785884,3.0140963567143,1.63287597963187,1.66547836370305,2.34254311399322,5.43277078551933,0,0,0.175951124163949,0.219195732427575,0.556094498451196,3.1342694986995,4.7329891373827,10.9468846750171,3.51106593656617,0.51469581422943,3.9782889915383,0.207125772535502,0.234526059981096,0,0,0.196764231747404,1.3884040159864,0.697601834251224,1.07309360559848,2.10177616260905,4.27855609775049,7.55170334763838,9.56611952641098,10.6725990820493,14.7098577245004,16.5073895075257,10.7247873767705,0.720332286654991,0.991256348951394,1.05780226665418,0.213288250535234,0.232236671860439,0.257734922644187,0,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.754005626400808,1.1937388322469,1.55971269695296,1.79763881730844,1.51296634912286,1.7922714592893,0.948339504765408,1.02823661348756,0,1.62921062276251,0.775809948670503,1.54298803758701,0.948548056863859,0.885660887877613,0.31399745568275,0.740382983530803,1.48226313543574,0,0.589676985339609,0.224862112384854,0,0.72353147925725,2.5462585178142,2.01387296215567,0.972811360650212,0.549122826376163,2.87536413054709,1.48856379067401,1.87222603868736,0.505157755894224,1.07638448113147,1.92977408545347,11.2699446001629,0,0.325929952884052,0,0,1.00503754465089,1.6663054862021,2.73187107000918,3.78324345854858,7.30833475840957,6.37819074629948,10.1595255123758,8.80693407516067,9.11289069063523,30.1582567878545,32.0904353453039,2.45882136509518,1.10374698521893,16.8578119487182,13.3621322715112,0,10.6037789425837,0.631016438832513,0.780877488593277,3.23135096599198,0.716906393857656,0.222798674082394,0,0.404810701674894,1.16902343164525,0.790575555893047,7.06906896127976,11.2132667314532,7.30068975035746,3.58351310577867,9.40329700943452,0,0.971122544619926,2.11626489875326,1.32023555829129,1.18120757152309,1.53717573971964,2.06742634534577,3.63533729477506,2.49548164869305,2.52829406348653,3.16255825724996,6.18813259489121,6.12791290356818,0.18006109403131,0.646793418913773,0.643011105094777,1.06404140185364,2.67553226403106,1.64549020602121,2.13125464380219,0.704015124191131,1.27099242518292,1.7642271844397,11.5420377059036,1.77610869365496,4.1012788951146,7.04296829618505,9.52017218521355,1.45740418314925,24.2907145633768,2.73393409276564,3.30218988741156,5.37064129372164,5.83942216714542,3.55404992074665,3.20289442489132,0.169978429993855,0.139951452323658,0.552799895217695,0.954670618015114,0.158167996790568,1.01659733563424,0.648032044930808,0.418176592028937,0.87345025498471,1.34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| ||
|EntrezGene=72324 | |||
|HGNC= | |||
|MCL_coexpression_id=113 | |||
|UniProt=Q91ZV7,A2A539 | |||
|association_with_transcript=0bp_to_ENSMUST00000017561,ENSMUST00000107564,ENSMUST00000107565,ENSMUST00000141708,NM_001163608,NM_028199,uc007lfc.2,uc011ydx.1_5end | |||
|description=CAGE_peak_1_at_Plxdc1_5end | |||
|id=chr11:97847698..97847786,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.73e-08,120;UBERON:0004120,1.73e-08,120;UBERON:0006603,1.73e-08,120 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0,0,0.387369970324729,0.140788722151667,0.234064526321993,0,0,0,0.174840804837995,3.99731714178795,1.21485160433896,3.49780939064073,2.20823515750766,1.7824876368746,2.12194825899015,9.0145887560134,1.09220046320974,0.261199789138935,0.159992422793407,0.45881856213434,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0.408338712524738,2.09265815368454,2.3440060335714,1.0470474879476,0,0,2.42755176515577,4.15459499319405,4.76471576731718,0.367093504323363,0,1.74420125104357,3.07560655828261,1.55543919259427,3.21968769738334,15.8127820801469,0.335565212115473,0.725362142011344,0.672187598284928,0.257259436035947,0.286533439938757,0.515672092277442,0.202316460859598,0,0,0.677689064138264,0.889294796111139,34.6461391153339,44.4989863155138,36.9449659771972,13.4820049733282,14.6002956022191,0.311068836925433,0.135005938331691,0,4.57041575046086,3.09215957332259,0.367472397644862,0,0.919218786610021,23.1243350098716,26.3035916455487,12.7493422602682,0.791317726381163,0.548925861614458,0.52091337055676,13.6799669510677,11.8180148106653,10.0846843532695,4.41942878210502,2.27794689278565,0.559198337475902,0.681535739998656,0.982430281388212,4.92769630792852,6.0229671388697,0,0,0.649776417447669,0,4.63466586434781,0.852151612890289,1.29893002301434,0.70667914902068,0,0,0,0,0,0,0,2.96878087269556,4.66088190564909,11.4300447079915,3.64319186208885,3.04465478312141,4.38169444786511,4.82312449768392,3.88042733547826,6.6603293404728,0.247194967734374,1.73519228303894,7.96149496754887,4.52947179852746,11.2629174414801,8.24287930329878,0,30.7419836862124,44.8215952580794,2.29911349687732,0.958520996047362,1.79970819298022,1.65191295194984,18.7238299256028,18.3000241127451,1.7591609295801,24.6830534673033,19.6900902144355,23.4800490352303,19.9556753573342,2.64782346010822,8.58408097209642,8.59257378674494,4.41927897361595,0.130120442962704,0.919608417733892,1.98068342785884,3.0140963567143,1.63287597963187,1.66547836370305,2.34254311399322,5.43277078551933,0,0,0.175951124163949,0.219195732427575,0.556094498451196,3.1342694986995,4.7329891373827,10.9468846750171,3.51106593656617,0.51469581422943,3.9782889915383,0.207125772535502,0.234526059981096,0,0,0.196764231747404,1.3884040159864,0.697601834251224,1.07309360559848,2.10177616260905,4.27855609775049,7.55170334763838,9.56611952641098,10.6725990820493,14.7098577245004,16.5073895075257,10.7247873767705,0.720332286654991,0.991256348951394,1.05780226665418,0.213288250535234,0.232236671860439,0.257734922644187,0,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.754005626400808,1.1937388322469,1.55971269695296,1.79763881730844,1.51296634912286,1.7922714592893,0.948339504765408,1.02823661348756,0,1.62921062276251,0.775809948670503,1.54298803758701,0.948548056863859,0.885660887877613,0.31399745568275,0.740382983530803,1.48226313543574,0,0.589676985339609,0.224862112384854,0,0.72353147925725,2.5462585178142,2.01387296215567,0.972811360650212,0.549122826376163,2.87536413054709,1.48856379067401,1.87222603868736,0.505157755894224,1.07638448113147,1.92977408545347,11.2699446001629,0,0.325929952884052,0,0,1.00503754465089,1.6663054862021,2.73187107000918,3.78324345854858,7.30833475840957,6.37819074629948,10.1595255123758,8.80693407516067,9.11289069063523,30.1582567878545,32.0904353453039,2.45882136509518,1.10374698521893,16.8578119487182,13.3621322715112,0,10.6037789425837,0.631016438832513,0.780877488593277,3.23135096599198,0.716906393857656,0.222798674082394,0,0.404810701674894,1.16902343164525,0.790575555893047,7.06906896127976,11.2132667314532,7.30068975035746,3.58351310577867,9.40329700943452,0,0.971122544619926,2.11626489875326,1.32023555829129,1.18120757152309,1.53717573971964,2.06742634534577,3.63533729477506,2.49548164869305,2.52829406348653,3.16255825724996,6.18813259489121,6.12791290356818,0.18006109403131,0.646793418913773,0.643011105094777,1.06404140185364,2.67553226403106,1.64549020602121,2.13125464380219,0.704015124191131,1.27099242518292,1.7642271844397,11.5420377059036,1.77610869365496,4.1012788951146,7.04296829618505,9.52017218521355,1.45740418314925,24.2907145633768,2.73393409276564,3.30218988741156,5.37064129372164,5.83942216714542,3.55404992074665,3.20289442489132,0.169978429993855,0.139951452323658,0.552799895217695,0.954670618015114,0.158167996790568,1.01659733563424,0.648032044930808,0.418176592028937,0.87345025498471,1.34864346384821,1.73572257023205,2.87931536182433,1.55537967950151,1.24267862617385,1.12738587736838,29.0062099325319,30.6098207345631,14.0004855607714,11.1077448190849,9.79945527846513,8.33236394384853,8.20287624516886,4.61381115473128,0.966336483304024,1.15212002503146,46.4536347323422,1.01362607645082,1.84879722896689,13.5117655896907,26.3169242631198,34.9679184415026,38.8231301949499,36.4793132121206,37.7614522806072,48.9247698725099,57.3700993428623,57.7925232786732,55.6104444681104,68.7236184827625,11.5632495643758,0.443971906748129,0,0,4.25017106870819,12.387043379778,5.31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| |||
|short_description=p1@Plxdc1 | |||
}} | |||
Revision as of 21:46, 12 September 2013
| Short description: | p1@Plxdc1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Plxdc1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:113 |
| Association with transcript: | 0bp_to_ENSMUST00000017561, ENSMUST00000107564, ENSMUST00000107565, ENSMUST00000141708, NM_001163608, NM_028199, uc007lfc.2, uc011ydx.1_5end |
| EntrezGene: | Plxdc1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesoderm | 1.73e-08 | 120 |
| mesoderm-derived structure | 1.73e-08 | 120 |
| presumptive mesoderm | 1.73e-08 | 120 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
