FFCP PHASE1:Mm9::chr11:98189657..98189671,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=76|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:98189657..98189671,-|id=chr11:98189657..98189671,-|ontology_enrichment_celltype=CL:0002609!2.46e-14!6;CL:0002608!8.06e-08!3;CL:0000117!1.62e-07!23;CL:0000337!1.62e-07!23|ontology_enrichment_celltype_v019_2=CL:0002609,5.11e-46,6;CL:0002608,2.04e-15,3;CL:0000117,2.86e-12,23;CL:0000337,2.86e-12,23;CL:0000540,1.30e-08,33;CL:0000047,1.30e-08,33;CL:0000031,1.30e-08,33;CL:0000404,1.30e-08,33;CL:0000393,2.62e-07,39;CL:0000211,2.62e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000956!9.52e-19!21;UBERON:0001869!9.52e-19!21;UBERON:0000203!9.52e-19!21;UBERON:0002791!2.12e-18!29;UBERON:0003528!2.12e-18!29;UBERON:0001893!2.12e-18!29;UBERON:0002020!8.16e-17!34;UBERON:0002780!1.52e-12!39;UBERON:0001890!1.52e-12!39;UBERON:0006240!1.52e-12!39;UBERON:0003080!4.02e-12!40;UBERON:0001049!6.44e-12!52;UBERON:0005068!6.44e-12!52;UBERON:0006241!6.44e-12!52;UBERON:0007135!6.44e-12!52;UBERON:0002619!1.01e-11!17;UBERON:0002616!1.20e-11!49;UBERON:0000955!2.57e-11!50;UBERON:0006238!2.57e-11!50;UBERON:0003056!2.44e-10!49;UBERON:0000033!4.89e-09!63;UBERON:0002346!2.38e-08!71;UBERON:0003075!2.38e-08!71;UBERON:0007284!2.38e-08!71;UBERON:0001954!2.42e-08!7;UBERON:0003022!2.42e-08!7;UBERON:0002421!2.42e-08!7;UBERON:0000349!2.42e-08!7;UBERON:0002600!2.42e-08!7;UBERON:0001017!5.00e-08!73;UBERON:0005743!5.00e-08!73;UBERON:0000073!1.11e-07!75;UBERON:0001016!1.11e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0000956,5.01e-19,21;UBERON:0001869,5.01e-19,21;UBERON:0000203,5.01e-19,21;UBERON:0001954,1.11e-14,7;UBERON:0003022,1.11e-14,7;UBERON:0002421,1.11e-14,7;UBERON:0000349,1.11e-14,7;UBERON:0002600,1.11e-14,7;UBERON:0003528,8.05e-14,29;UBERON:0002791,8.05e-14,29;UBERON:0001893,8.05e-14,29;UBERON:0001851,7.11e-12,1;UBERON:0005889,7.11e-12,1;UBERON:0002020,8.39e-12,34;UBERON:0002780,2.68e-10,39;UBERON:0001890,2.68e-10,39;UBERON:0006240,2.68e-10,39;UBERON:0003080,4.84e-10,40;UBERON:0002616,9.82e-09,46;UBERON:0000955,1.51e-08,47;UBERON:0006238,1.51e-08,47;UBERON:0003056,3.37e-08,49;UBERON:0001049,1.00e-07,52;UBERON:0005068,1.00e-07,52;UBERON:0006241,1.00e-07,52;UBERON:0007135,1.00e-07,52;UBERON:0000073,1.94e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,5.49554945234932,9.31540974488665,7.15104868594699,0,0,1.83736198822431,2.49198224647415,0.919218786610021,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0,0.376963056338593,0.347648640384553,1.02286182932132,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,3.80747065803352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.859265911718438,0.685082519770642,0,0,0.45032120322422,0,0,0,0,0,0.486213434136588,0.628839487883947,0.183843508450014,0,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.229741875822453,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.25384382367503,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0,1.24905288968973,0,0,0,0,0|short_description=p@chr11:98189657..98189671,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:98189657..98189671,- | |||
|id=chr11:98189657..98189671,- | |||
|ontology_enrichment_celltype=CL:0002609!2.46e-14!6;CL:0002608!8.06e-08!3;CL:0000117!1.62e-07!23;CL:0000337!1.62e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,5.11e-46,6;CL:0002608,2.04e-15,3;CL:0000117,2.86e-12,23;CL:0000337,2.86e-12,23;CL:0000540,1.30e-08,33;CL:0000047,1.30e-08,33;CL:0000031,1.30e-08,33;CL:0000404,1.30e-08,33;CL:0000393,2.62e-07,39;CL:0000211,2.62e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!9.52e-19!21;UBERON:0001869!9.52e-19!21;UBERON:0000203!9.52e-19!21;UBERON:0002791!2.12e-18!29;UBERON:0003528!2.12e-18!29;UBERON:0001893!2.12e-18!29;UBERON:0002020!8.16e-17!34;UBERON:0002780!1.52e-12!39;UBERON:0001890!1.52e-12!39;UBERON:0006240!1.52e-12!39;UBERON:0003080!4.02e-12!40;UBERON:0001049!6.44e-12!52;UBERON:0005068!6.44e-12!52;UBERON:0006241!6.44e-12!52;UBERON:0007135!6.44e-12!52;UBERON:0002619!1.01e-11!17;UBERON:0002616!1.20e-11!49;UBERON:0000955!2.57e-11!50;UBERON:0006238!2.57e-11!50;UBERON:0003056!2.44e-10!49;UBERON:0000033!4.89e-09!63;UBERON:0002346!2.38e-08!71;UBERON:0003075!2.38e-08!71;UBERON:0007284!2.38e-08!71;UBERON:0001954!2.42e-08!7;UBERON:0003022!2.42e-08!7;UBERON:0002421!2.42e-08!7;UBERON:0000349!2.42e-08!7;UBERON:0002600!2.42e-08!7;UBERON:0001017!5.00e-08!73;UBERON:0005743!5.00e-08!73;UBERON:0000073!1.11e-07!75;UBERON:0001016!1.11e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,5.01e-19,21;UBERON:0001869,5.01e-19,21;UBERON:0000203,5.01e-19,21;UBERON:0001954,1.11e-14,7;UBERON:0003022,1.11e-14,7;UBERON:0002421,1.11e-14,7;UBERON:0000349,1.11e-14,7;UBERON:0002600,1.11e-14,7;UBERON:0003528,8.05e-14,29;UBERON:0002791,8.05e-14,29;UBERON:0001893,8.05e-14,29;UBERON:0001851,7.11e-12,1;UBERON:0005889,7.11e-12,1;UBERON:0002020,8.39e-12,34;UBERON:0002780,2.68e-10,39;UBERON:0001890,2.68e-10,39;UBERON:0006240,2.68e-10,39;UBERON:0003080,4.84e-10,40;UBERON:0002616,9.82e-09,46;UBERON:0000955,1.51e-08,47;UBERON:0006238,1.51e-08,47;UBERON:0003056,3.37e-08,49;UBERON:0001049,1.00e-07,52;UBERON:0005068,1.00e-07,52;UBERON:0006241,1.00e-07,52;UBERON:0007135,1.00e-07,52;UBERON:0000073,1.94e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,5.49554945234932,9.31540974488665,7.15104868594699,0,0,1.83736198822431,2.49198224647415,0.919218786610021,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0,0.376963056338593,0.347648640384553,1.02286182932132,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,3.80747065803352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.859265911718438,0.685082519770642,0,0,0.45032120322422,0,0,0,0,0,0.486213434136588,0.628839487883947,0.183843508450014,0,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.229741875822453,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.25384382367503,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0,1.24905288968973,0,0,0,0,0 | |||
|short_description=p@chr11:98189657..98189671,- | |||
}} |
Revision as of 21:47, 12 September 2013
Short description: | p@chr11:98189657..98189671, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:98189657..98189671, - |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 5.11e-46 | 6 |
hippocampal neuron | 2.04e-15 | 3 |
CNS neuron (sensu Vertebrata) | 2.86e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.86e-12 | 23 |
neuron | 1.30e-08 | 33 |
neuronal stem cell | 1.30e-08 | 33 |
neuroblast | 1.30e-08 | 33 |
electrically signaling cell | 1.30e-08 | 33 |
electrically responsive cell | 2.62e-07 | 39 |
electrically active cell | 2.62e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 5.01e-19 | 21 |
cerebral hemisphere | 5.01e-19 | 21 |
pallium | 5.01e-19 | 21 |
Ammon's horn | 1.11e-14 | 7 |
lobe parts of cerebral cortex | 1.11e-14 | 7 |
hippocampal formation | 1.11e-14 | 7 |
limbic system | 1.11e-14 | 7 |
limbic lobe | 1.11e-14 | 7 |
brain grey matter | 8.05e-14 | 29 |
regional part of telencephalon | 8.05e-14 | 29 |
telencephalon | 8.05e-14 | 29 |
cortex | 7.11e-12 | 1 |
zygote cortex | 7.11e-12 | 1 |
gray matter | 8.39e-12 | 34 |
regional part of forebrain | 2.68e-10 | 39 |
forebrain | 2.68e-10 | 39 |
future forebrain | 2.68e-10 | 39 |
anterior neural tube | 4.84e-10 | 40 |
regional part of brain | 9.82e-09 | 46 |
brain | 1.51e-08 | 47 |
future brain | 1.51e-08 | 47 |
pre-chordal neural plate | 3.37e-08 | 49 |
neural tube | 1.00e-07 | 52 |
neural rod | 1.00e-07 | 52 |
future spinal cord | 1.00e-07 | 52 |
neural keel | 1.00e-07 | 52 |
regional part of nervous system | 1.94e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.