FFCP PHASE1:Hg19::chr3:18465197..18465206,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6304|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=10541|TSSclassifier=S|UniProt=Q01826|association_with_transcript=99bp_to_M97287_5end|coexpression_cluster_id=C18|description=CAGE_peak_38_at_SATB1_5end|id=chr3:18465197..18465206,-|ontology_enrichment_celltype=CL:0000791!5.12e-18!18;CL:0000789!5.12e-18!18;CL:0002420!5.12e-18!18;CL:0002419!5.12e-18!18;CL:0000790!5.12e-18!18;CL:0000084!2.83e-14!25;CL:0000827!2.83e-14!25;CL:0000625!1.12e-13!11;CL:0000738!9.31e-11!140;CL:0000838!1.04e-09!52;CL:0000542!1.91e-09!53;CL:0000051!1.91e-09!53;CL:0002087!2.87e-09!119;CL:0000842!2.95e-08!3;CL:0000037!7.51e-08!172;CL:0000566!7.51e-08!172;CL:0002031!9.11e-08!124;CL:0000988!1.43e-07!182;CL:0000624!3.24e-07!6|ontology_enrichment_celltype_v019=CL:0000791;6.52e-23;18!CL:0000789;6.52e-23;18!CL:0002419;6.52e-23;18!CL:0000084;1.54e-16;25!CL:0000625;4.52e-14;11!CL:0000624;4.81e-12;6!CL:0000815;1.51e-09;2!CL:0000792;1.51e-09;2!CL:0002677;1.51e-09;2!CL:0000226;8.86e-07;3!CL:0000898;8.86e-07;3!CL:0000842;8.86e-07;3|ontology_enrichment_celltype_v019_2=CL:0000791,6.38e-23,18;CL:0000789,6.38e-23,18;CL:0002420,6.38e-23,18;CL:0002419,6.38e-23,18;CL:0000790,6.38e-23,18;CL:0000084,1.51e-16,25;CL:0000827,1.51e-16,25;CL:0000625,5.05e-14,11;CL:0000624,4.07e-12,6;CL:0000815,1.12e-09,2;CL:0000792,1.12e-09,2;CL:0002677,1.12e-09,2;CL:0000838,5.60e-08,52;CL:0000542,7.92e-08,53;CL:0000051,7.92e-08,53;CL:0000898,7.28e-07,3|ontology_enrichment_development_v019=CL:0000790;6.52e-23;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002619!8.99e-12!22;UBERON:0001950!5.83e-11!20;UBERON:0001869!4.09e-10!32;UBERON:0000956!4.25e-10!25;UBERON:0000203!4.25e-10!25;UBERON:0000200!1.66e-09!6;UBERON:0001893!2.37e-09!34;UBERON:0002780!1.73e-08!41;UBERON:0001890!1.73e-08!41;UBERON:0006240!1.73e-08!41;UBERON:0002791!2.38e-08!33;UBERON:0003080!3.27e-08!42;UBERON:0002020!4.98e-08!34;UBERON:0003528!4.98e-08!34;UBERON:0007023!8.17e-08!115;UBERON:0001871!3.92e-07!7|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0.954053754535364,0,0,0,0,0.560508562981536,0,2.360517241366,0,0.616804496998528,0.83593247695339,1.62961133316795,1.4203434172042,0,0.668462741311041,0,0,0,0.25618263945135,0,0.328875809207352,0,0.869409257205157,3.85545064221357,3.47803076516627,1.04535523804977,0.566546713487831,0.383220493601921,0,0.759059076058509,0,0.651083453856419,0.950452044448374,1.05402583354441,0.127986611154418,1.24930726552346,0.710331756132051,0,1.00803371612366,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46331618947972,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,1.03384013061444,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.476463550915578,0,0,0.540031437238115,0,0,0,0,0,0,0.355709216742071,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.19024743058172,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0.263091094251396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.64742883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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6304 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10541 | |||
|TSSclassifier=S | |||
|UniProt=Q01826 | |||
|association_with_transcript=99bp_to_M97287_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_38_at_SATB1_5end | |||
|id=chr3:18465197..18465206,- | |||
|ontology_enrichment_celltype=CL:0000791!5.12e-18!18;CL:0000789!5.12e-18!18;CL:0002420!5.12e-18!18;CL:0002419!5.12e-18!18;CL:0000790!5.12e-18!18;CL:0000084!2.83e-14!25;CL:0000827!2.83e-14!25;CL:0000625!1.12e-13!11;CL:0000738!9.31e-11!140;CL:0000838!1.04e-09!52;CL:0000542!1.91e-09!53;CL:0000051!1.91e-09!53;CL:0002087!2.87e-09!119;CL:0000842!2.95e-08!3;CL:0000037!7.51e-08!172;CL:0000566!7.51e-08!172;CL:0002031!9.11e-08!124;CL:0000988!1.43e-07!182;CL:0000624!3.24e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.52e-23;18!CL:0000789;6.52e-23;18!CL:0002419;6.52e-23;18!CL:0000084;1.54e-16;25!CL:0000625;4.52e-14;11!CL:0000624;4.81e-12;6!CL:0000815;1.51e-09;2!CL:0000792;1.51e-09;2!CL:0002677;1.51e-09;2!CL:0000226;8.86e-07;3!CL:0000898;8.86e-07;3!CL:0000842;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.38e-23,18;CL:0000789,6.38e-23,18;CL:0002420,6.38e-23,18;CL:0002419,6.38e-23,18;CL:0000790,6.38e-23,18;CL:0000084,1.51e-16,25;CL:0000827,1.51e-16,25;CL:0000625,5.05e-14,11;CL:0000624,4.07e-12,6;CL:0000815,1.12e-09,2;CL:0000792,1.12e-09,2;CL:0002677,1.12e-09,2;CL:0000838,5.60e-08,52;CL:0000542,7.92e-08,53;CL:0000051,7.92e-08,53;CL:0000898,7.28e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;6.52e-23;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!8.99e-12!22;UBERON:0001950!5.83e-11!20;UBERON:0001869!4.09e-10!32;UBERON:0000956!4.25e-10!25;UBERON:0000203!4.25e-10!25;UBERON:0000200!1.66e-09!6;UBERON:0001893!2.37e-09!34;UBERON:0002780!1.73e-08!41;UBERON:0001890!1.73e-08!41;UBERON:0006240!1.73e-08!41;UBERON:0002791!2.38e-08!33;UBERON:0003080!3.27e-08!42;UBERON:0002020!4.98e-08!34;UBERON:0003528!4.98e-08!34;UBERON:0007023!8.17e-08!115;UBERON:0001871!3.92e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0.954053754535364,0,0,0,0,0.560508562981536,0,2.360517241366,0,0.616804496998528,0.83593247695339,1.62961133316795,1.4203434172042,0,0.668462741311041,0,0,0,0.25618263945135,0,0.328875809207352,0,0.869409257205157,3.85545064221357,3.47803076516627,1.04535523804977,0.566546713487831,0.383220493601921,0,0.759059076058509,0,0.651083453856419,0.950452044448374,1.05402583354441,0.127986611154418,1.24930726552346,0.710331756132051,0,1.00803371612366,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46331618947972,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,1.03384013061444,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.476463550915578,0,0,0.540031437238115,0,0,0,0,0,0,0.355709216742071,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.19024743058172,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0.263091094251396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0.233939463462106,0,0,0.11294608203896,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581300188524055,0.558672428662721,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p38@SATB1 | |||
}} |
Revision as of 23:05, 12 September 2013
Short description: | p38@SATB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_38_at_SATB1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 99bp_to_M97287_5end |
EntrezGene: | SATB1 |
HGNC: | 10541 |
UniProt: | Q01826 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.38e-23 | 18 |
alpha-beta T cell | 6.38e-23 | 18 |
immature T cell | 6.38e-23 | 18 |
mature T cell | 6.38e-23 | 18 |
immature alpha-beta T cell | 6.38e-23 | 18 |
T cell | 1.51e-16 | 25 |
pro-T cell | 1.51e-16 | 25 |
CD8-positive, alpha-beta T cell | 5.05e-14 | 11 |
CD4-positive, alpha-beta T cell | 4.07e-12 | 6 |
regulatory T cell | 1.12e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.12e-09 | 2 |
naive regulatory T cell | 1.12e-09 | 2 |
lymphoid lineage restricted progenitor cell | 5.60e-08 | 52 |
lymphocyte | 7.92e-08 | 53 |
common lymphoid progenitor | 7.92e-08 | 53 |
naive T cell | 7.28e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.