FFCP PHASE1:Mm9::chr12:85560016..85560038,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=238317|HGNC=|MCL_coexpression_id=7|UniProt=E9Q2I4,Q3U224|association_with_transcript=-185bp_to_ENSMUST00000046266,NM_001163501,uc007oem.2_5end|description=CAGE_peak_6_at_C130039O16Rik_5end|id=chr12:85560016..85560038,-|ontology_enrichment_celltype=CL:0000791!3.81e-09!9;CL:0000789!3.81e-09!9;CL:0002420!3.81e-09!9;CL:0002419!3.81e-09!9;CL:0000790!3.81e-09!9;CL:0000838!2.56e-08!12;CL:0000624!2.73e-08!8;CL:0000084!1.42e-07!11;CL:0000827!1.42e-07!11;CL:0000542!2.60e-07!13;CL:0000051!2.60e-07!13|ontology_enrichment_celltype_v019_2=CL:0000791,1.59e-50,9;CL:0000789,1.59e-50,9;CL:0002420,1.59e-50,9;CL:0002419,1.59e-50,9;CL:0000790,1.59e-50,9;CL:0000838,5.08e-46,12;CL:0000624,5.71e-45,8;CL:0000542,2.12e-42,13;CL:0000051,2.12e-42,13;CL:0000084,3.51e-41,11;CL:0000827,3.51e-41,11;CL:0000893,6.23e-34,6;CL:0002489,6.23e-34,6;CL:0000898,6.23e-34,6;CL:0000809,6.23e-34,6;CL:0000810,6.23e-34,6;CL:0000895,6.23e-34,6;CL:0000808,6.23e-34,6;CL:0000894,6.23e-34,6;CL:0000806,6.23e-34,6;CL:0000807,6.23e-34,6;CL:0000805,6.23e-34,6;CL:0002425,6.23e-34,6;CL:0002436,6.23e-34,6;CL:0002427,6.23e-34,6;CL:0002428,6.23e-34,6;CL:0002429,6.23e-34,6;CL:0002433,6.23e-34,6;CL:0002431,6.23e-34,6;CL:0002432,6.23e-34,6;CL:0000738,3.63e-32,17;CL:0002087,3.63e-32,17;CL:0002031,6.15e-26,25;CL:0000988,5.71e-20,32;CL:0002032,5.71e-20,32;CL:0000037,5.71e-20,32;CL:0000837,5.71e-20,32;CL:0002320,1.84e-13,46;CL:0000134,1.84e-13,46;CL:0000219,2.99e-11,54;CL:0000625,4.10e-07,1;CL:0000815,4.68e-07,1;CL:0000792,4.68e-07,1;CL:0000034,9.66e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.77e-07!23;UBERON:0000974!1.77e-07!23;UBERON:0004807!1.77e-07!23;UBERON:0005058!1.77e-07!23;UBERON:0003351!1.77e-07!23;UBERON:0009113!1.77e-07!23;UBERON:0003295!1.77e-07!23;UBERON:0009722!1.77e-07!23;UBERON:0005562!1.77e-07!23;UBERON:0007690!1.77e-07!23;UBERON:0006562!6.98e-07!24;UBERON:0003408!6.98e-07!24;UBERON:0001557!6.98e-07!24;UBERON:0001042!6.98e-07!24;UBERON:0008814!6.98e-07!24;UBERON:0009145!6.98e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.84e-13,46;UBERON:0002370,1.35e-08,23;UBERON:0000974,1.35e-08,23;UBERON:0004807,1.35e-08,23;UBERON:0005058,1.35e-08,23;UBERON:0003351,1.35e-08,23;UBERON:0009113,1.35e-08,23;UBERON:0003295,1.35e-08,23;UBERON:0009722,1.35e-08,23;UBERON:0005562,1.35e-08,23;UBERON:0007690,1.35e-08,23;UBERON:0006562,3.22e-08,24;UBERON:0003408,3.22e-08,24;UBERON:0001557,3.22e-08,24;UBERON:0001042,3.22e-08,24;UBERON:0008814,3.22e-08,24;UBERON:0009145,3.22e-08,24;UBERON:0000072,2.95e-07,27|phase1_expression=0.160148847104794,1.74487703819681,1.81999695755814,0.60492842261366,0.500895729946347,0,0,4.77756296733832,79.40483929354,107.435617581795,3.25314139628459,4.22792442675283,4.45121897821135,3.75907730401689,0,0,0,0.157731082679119,0.959801035240171,1.27316895539409,0,0.0992909512008853,0,0.159992422793407,0,0,0.86152399231815,0,0.190023419456374,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,1.36609096991689,0.485510353031154,0.251793635951155,0,0,0,0,0,0.388859798148567,0.139986421625363,0,1.00669563634642,11.6057942721815,11.4271891708438,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0.56276261003168,0,0,0,0,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.173485326766136,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0.323533699894818,0,0,0,0,0,1.02182822083437,0.359445373517761,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0.162241263067758,0.101839363850316,0,0.252722758433675,0,0.130120442962704,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0,0,0.16455984991348,0.32833492815819,0.162137619091711,0,0.219550115291051,0,0,0,0.991256348951394,0.793351699990633,0,0,0,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0.432276099749388,0.398282546508734,0,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.714130922658041,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0.275936746304732,0.160550589987792,0,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0.361877549568935,0.119372344003136,0.820704498725306,0.291480836629851,0,0.170870880797853,0,0,0,0.546776910884101,0,0.679913719975421,0.979660166265606,0.690999869022119,0,0.158167996790568,0.203319467126849,0,0,0,0,0.0826534557253359,0,0.90730481304255,0,0,0,0.165458490457098,0,0.129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| ||
|EntrezGene=238317 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt=E9Q2I4,Q3U224 | |||
|association_with_transcript=-185bp_to_ENSMUST00000046266,NM_001163501,uc007oem.2_5end | |||
|description=CAGE_peak_6_at_C130039O16Rik_5end | |||
|id=chr12:85560016..85560038,- | |||
|ontology_enrichment_celltype=CL:0000791!3.81e-09!9;CL:0000789!3.81e-09!9;CL:0002420!3.81e-09!9;CL:0002419!3.81e-09!9;CL:0000790!3.81e-09!9;CL:0000838!2.56e-08!12;CL:0000624!2.73e-08!8;CL:0000084!1.42e-07!11;CL:0000827!1.42e-07!11;CL:0000542!2.60e-07!13;CL:0000051!2.60e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.59e-50,9;CL:0000789,1.59e-50,9;CL:0002420,1.59e-50,9;CL:0002419,1.59e-50,9;CL:0000790,1.59e-50,9;CL:0000838,5.08e-46,12;CL:0000624,5.71e-45,8;CL:0000542,2.12e-42,13;CL:0000051,2.12e-42,13;CL:0000084,3.51e-41,11;CL:0000827,3.51e-41,11;CL:0000893,6.23e-34,6;CL:0002489,6.23e-34,6;CL:0000898,6.23e-34,6;CL:0000809,6.23e-34,6;CL:0000810,6.23e-34,6;CL:0000895,6.23e-34,6;CL:0000808,6.23e-34,6;CL:0000894,6.23e-34,6;CL:0000806,6.23e-34,6;CL:0000807,6.23e-34,6;CL:0000805,6.23e-34,6;CL:0002425,6.23e-34,6;CL:0002436,6.23e-34,6;CL:0002427,6.23e-34,6;CL:0002428,6.23e-34,6;CL:0002429,6.23e-34,6;CL:0002433,6.23e-34,6;CL:0002431,6.23e-34,6;CL:0002432,6.23e-34,6;CL:0000738,3.63e-32,17;CL:0002087,3.63e-32,17;CL:0002031,6.15e-26,25;CL:0000988,5.71e-20,32;CL:0002032,5.71e-20,32;CL:0000037,5.71e-20,32;CL:0000837,5.71e-20,32;CL:0002320,1.84e-13,46;CL:0000134,1.84e-13,46;CL:0000219,2.99e-11,54;CL:0000625,4.10e-07,1;CL:0000815,4.68e-07,1;CL:0000792,4.68e-07,1;CL:0000034,9.66e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.77e-07!23;UBERON:0000974!1.77e-07!23;UBERON:0004807!1.77e-07!23;UBERON:0005058!1.77e-07!23;UBERON:0003351!1.77e-07!23;UBERON:0009113!1.77e-07!23;UBERON:0003295!1.77e-07!23;UBERON:0009722!1.77e-07!23;UBERON:0005562!1.77e-07!23;UBERON:0007690!1.77e-07!23;UBERON:0006562!6.98e-07!24;UBERON:0003408!6.98e-07!24;UBERON:0001557!6.98e-07!24;UBERON:0001042!6.98e-07!24;UBERON:0008814!6.98e-07!24;UBERON:0009145!6.98e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.84e-13,46;UBERON:0002370,1.35e-08,23;UBERON:0000974,1.35e-08,23;UBERON:0004807,1.35e-08,23;UBERON:0005058,1.35e-08,23;UBERON:0003351,1.35e-08,23;UBERON:0009113,1.35e-08,23;UBERON:0003295,1.35e-08,23;UBERON:0009722,1.35e-08,23;UBERON:0005562,1.35e-08,23;UBERON:0007690,1.35e-08,23;UBERON:0006562,3.22e-08,24;UBERON:0003408,3.22e-08,24;UBERON:0001557,3.22e-08,24;UBERON:0001042,3.22e-08,24;UBERON:0008814,3.22e-08,24;UBERON:0009145,3.22e-08,24;UBERON:0000072,2.95e-07,27 | |||
|phase1_expression=0.160148847104794,1.74487703819681,1.81999695755814,0.60492842261366,0.500895729946347,0,0,4.77756296733832,79.40483929354,107.435617581795,3.25314139628459,4.22792442675283,4.45121897821135,3.75907730401689,0,0,0,0.157731082679119,0.959801035240171,1.27316895539409,0,0.0992909512008853,0,0.159992422793407,0,0,0.86152399231815,0,0.190023419456374,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,1.36609096991689,0.485510353031154,0.251793635951155,0,0,0,0,0,0.388859798148567,0.139986421625363,0,1.00669563634642,11.6057942721815,11.4271891708438,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0.56276261003168,0,0,0,0,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.173485326766136,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0.323533699894818,0,0,0,0,0,1.02182822083437,0.359445373517761,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0.162241263067758,0.101839363850316,0,0.252722758433675,0,0.130120442962704,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0,0,0.16455984991348,0.32833492815819,0.162137619091711,0,0.219550115291051,0,0,0,0.991256348951394,0.793351699990633,0,0,0,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0.432276099749388,0.398282546508734,0,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.714130922658041,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0.275936746304732,0.160550589987792,0,0.327869890753351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0.361877549568935,0.119372344003136,0.820704498725306,0.291480836629851,0,0.170870880797853,0,0,0,0.546776910884101,0,0.679913719975421,0.979660166265606,0.690999869022119,0,0.158167996790568,0.203319467126849,0,0,0,0,0.0826534557253359,0,0.90730481304255,0,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0,0.209718688851422,0,0,0.316011120628178,0,0.205421914329655,0,0.358053391334963,0.39736270956253,0.360586348559907,0.295379054349154,0.403865799792591,0.381034033274999,0.504130925684203,0.194915761479505,0.288635524920988,0.584384510907845,0,0.887943813496259,1.25599399253266,0.839423081820392,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.17230640686684,0.476293691283074,0.347652977834566,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0,0.282328141245992,0,0.182927972872773,0,0.407412341537585,0.561142271657738,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0.441182838239031,0 | |||
|short_description=p6@C130039O16Rik | |||
}} |
Revision as of 23:27, 12 September 2013
Short description: | p6@C130039O16Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_C130039O16Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -185bp_to_ENSMUST00000046266, NM_001163501, uc007oem.2_5end |
EntrezGene: | C130039O16Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.84e-13 | 46 |
thymus | 1.35e-08 | 23 |
neck | 1.35e-08 | 23 |
respiratory system epithelium | 1.35e-08 | 23 |
hemolymphoid system gland | 1.35e-08 | 23 |
pharyngeal epithelium | 1.35e-08 | 23 |
thymic region | 1.35e-08 | 23 |
pharyngeal gland | 1.35e-08 | 23 |
entire pharyngeal arch endoderm | 1.35e-08 | 23 |
thymus primordium | 1.35e-08 | 23 |
early pharyngeal endoderm | 1.35e-08 | 23 |
pharynx | 3.22e-08 | 24 |
gland of gut | 3.22e-08 | 24 |
upper respiratory tract | 3.22e-08 | 24 |
chordate pharynx | 3.22e-08 | 24 |
pharyngeal arch system | 3.22e-08 | 24 |
pharyngeal region of foregut | 3.22e-08 | 24 |
segment of respiratory tract | 2.95e-07 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.