FFCP PHASE1:Hg19::chr3:42055874..42055894,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1175|description=CAGE_peak_at_chr3:42055874..42055894,-|id=chr3:42055874..42055894,-|ontology_enrichment_celltype=CL:0000738!4.89e-32!140;CL:0002087!6.90e-27!119;CL:0002031!1.54e-25!124;CL:0000037!4.95e-25!172;CL:0000566!4.95e-25!172;CL:0002393!3.70e-24!9;CL:0002397!3.70e-24!9;CL:0000988!6.04e-23!182;CL:0002032!2.55e-21!165;CL:0000837!2.55e-21!165;CL:0000624!5.87e-16!6;CL:0000838!8.65e-16!52;CL:0000542!2.18e-15!53;CL:0000051!2.18e-15!53;CL:0000766!3.73e-15!76;CL:0002057!3.50e-14!42;CL:0000791!3.38e-13!18;CL:0000789!3.38e-13!18;CL:0002420!3.38e-13!18;CL:0002419!3.38e-13!18;CL:0000790!3.38e-13!18;CL:0000860!6.11e-13!45;CL:0000839!4.12e-11!70;CL:0000557!6.98e-11!71;CL:0000084!1.06e-10!25;CL:0000827!1.06e-10!25;CL:0000623!1.30e-09!3;CL:0000825!1.30e-09!3;CL:0000134!1.66e-09!358;CL:0000875!4.44e-09!3;CL:0002396!4.44e-09!3;CL:0002320!4.53e-09!365;CL:0002194!6.85e-09!63;CL:0000576!6.85e-09!63;CL:0000040!6.85e-09!63;CL:0000559!6.85e-09!63;CL:0000898!1.28e-08!3;CL:0000842!1.45e-08!3;CL:0002009!1.73e-08!65;CL:0000763!2.83e-08!112;CL:0000049!2.83e-08!112;CL:0000219!1.50e-07!390;CL:0000771!6.31e-07!2|ontology_enrichment_celltype_v019=CL:0000623;2.28e-32;3!CL:0000771;4.14e-22;2!CL:0002393;1.35e-16;6!CL:0002397;1.35e-16;6!CL:0000542;5.75e-12;53!CL:0000791;1.79e-09;18!CL:0000789;1.79e-09;18!CL:0002419;1.79e-09;18!CL:0000097;3.74e-09;5!CL:0000625;4.06e-09;11!CL:0000236;4.92e-08;13!CL:0000084;7.21e-07;25!CL:0002087;8.74e-07;104|ontology_enrichment_celltype_v019_2=CL:0000623,1.95e-32,3;CL:0000825,1.95e-32,3;CL:0000738,1.81e-22,136;CL:0000771,3.93e-22,2;CL:0000838,7.59e-19,52;CL:0000542,1.82e-18,53;CL:0000051,1.82e-18,53;CL:0000037,9.14e-18,168;CL:0002031,2.26e-17,120;CL:0000988,9.57e-17,177;CL:0002032,1.99e-16,161;CL:0000837,1.99e-16,161;CL:0002087,9.73e-16,115;CL:0002393,2.79e-11,9;CL:0002397,2.79e-11,9;CL:0000791,2.14e-09,18;CL:0000789,2.14e-09,18;CL:0002420,2.14e-09,18;CL:0002419,2.14e-09,18;CL:0000790,2.14e-09,18;CL:0000097,3.44e-09,5;CL:0002028,3.44e-09,5;CL:0000625,4.80e-09,11;CL:0000236,1.73e-07,14;CL:0000134,4.06e-07,354;CL:0002320,6.30e-07,361;CL:0000084,8.18e-07,25;CL:0000827,8.18e-07,25|ontology_enrichment_development_v019=CL:0000051;5.75e-12;53!CL:0000790;1.79e-09;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.54e-10!102;UBERON:0003061!1.54e-10!102;UBERON:0002371!3.46e-10!80;UBERON:0002193!7.04e-10!112;UBERON:0001474!4.18e-09!86;UBERON:0002384!1.77e-08!375;UBERON:0004765!5.42e-07!101;UBERON:0001434!5.42e-07!101;UBERON:0002405!6.35e-07!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.77408061658038,0,0,0,0.232401601740905,0,0.587200878669695,2.76997704265939,3.81034450193269,6.72733699219141,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0.422510572623884,0.637812899895131,0.838634582033504,0.336985893439485,0.901061357049038,0.16072558669708,0.855038231223746,0.79566670879636,0.91332076882317,0,0,0,0.853460445133014,0,0,0,0,7.39976859842283,5.87237189370939,4.20500550937752,1.32171328579026,0,0,0.786839080455332,0.786021525498329,1.23360899399706,0,0.32592226663359,0,0,0.111410456885174,0.589211814949674,0.221533894583621,0,0,0,0,0,0,0,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,2.21767417547206,2.67440195783507,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,7.75560528296651,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,1.24396869324463,0.720599767084807,1.8936365013957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75843064282698,6.03757209606648,2.95188983443421,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,1.50999940573032,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1175 | |||
|description=CAGE_peak_at_chr3:42055874..42055894,- | |||
|id=chr3:42055874..42055894,- | |||
|ontology_enrichment_celltype=CL:0000738!4.89e-32!140;CL:0002087!6.90e-27!119;CL:0002031!1.54e-25!124;CL:0000037!4.95e-25!172;CL:0000566!4.95e-25!172;CL:0002393!3.70e-24!9;CL:0002397!3.70e-24!9;CL:0000988!6.04e-23!182;CL:0002032!2.55e-21!165;CL:0000837!2.55e-21!165;CL:0000624!5.87e-16!6;CL:0000838!8.65e-16!52;CL:0000542!2.18e-15!53;CL:0000051!2.18e-15!53;CL:0000766!3.73e-15!76;CL:0002057!3.50e-14!42;CL:0000791!3.38e-13!18;CL:0000789!3.38e-13!18;CL:0002420!3.38e-13!18;CL:0002419!3.38e-13!18;CL:0000790!3.38e-13!18;CL:0000860!6.11e-13!45;CL:0000839!4.12e-11!70;CL:0000557!6.98e-11!71;CL:0000084!1.06e-10!25;CL:0000827!1.06e-10!25;CL:0000623!1.30e-09!3;CL:0000825!1.30e-09!3;CL:0000134!1.66e-09!358;CL:0000875!4.44e-09!3;CL:0002396!4.44e-09!3;CL:0002320!4.53e-09!365;CL:0002194!6.85e-09!63;CL:0000576!6.85e-09!63;CL:0000040!6.85e-09!63;CL:0000559!6.85e-09!63;CL:0000898!1.28e-08!3;CL:0000842!1.45e-08!3;CL:0002009!1.73e-08!65;CL:0000763!2.83e-08!112;CL:0000049!2.83e-08!112;CL:0000219!1.50e-07!390;CL:0000771!6.31e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000623;2.28e-32;3!CL:0000771;4.14e-22;2!CL:0002393;1.35e-16;6!CL:0002397;1.35e-16;6!CL:0000542;5.75e-12;53!CL:0000791;1.79e-09;18!CL:0000789;1.79e-09;18!CL:0002419;1.79e-09;18!CL:0000097;3.74e-09;5!CL:0000625;4.06e-09;11!CL:0000236;4.92e-08;13!CL:0000084;7.21e-07;25!CL:0002087;8.74e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.95e-32,3;CL:0000825,1.95e-32,3;CL:0000738,1.81e-22,136;CL:0000771,3.93e-22,2;CL:0000838,7.59e-19,52;CL:0000542,1.82e-18,53;CL:0000051,1.82e-18,53;CL:0000037,9.14e-18,168;CL:0002031,2.26e-17,120;CL:0000988,9.57e-17,177;CL:0002032,1.99e-16,161;CL:0000837,1.99e-16,161;CL:0002087,9.73e-16,115;CL:0002393,2.79e-11,9;CL:0002397,2.79e-11,9;CL:0000791,2.14e-09,18;CL:0000789,2.14e-09,18;CL:0002420,2.14e-09,18;CL:0002419,2.14e-09,18;CL:0000790,2.14e-09,18;CL:0000097,3.44e-09,5;CL:0002028,3.44e-09,5;CL:0000625,4.80e-09,11;CL:0000236,1.73e-07,14;CL:0000134,4.06e-07,354;CL:0002320,6.30e-07,361;CL:0000084,8.18e-07,25;CL:0000827,8.18e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;5.75e-12;53!CL:0000790;1.79e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.54e-10!102;UBERON:0003061!1.54e-10!102;UBERON:0002371!3.46e-10!80;UBERON:0002193!7.04e-10!112;UBERON:0001474!4.18e-09!86;UBERON:0002384!1.77e-08!375;UBERON:0004765!5.42e-07!101;UBERON:0001434!5.42e-07!101;UBERON:0002405!6.35e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.77408061658038,0,0,0,0.232401601740905,0,0.587200878669695,2.76997704265939,3.81034450193269,6.72733699219141,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0.422510572623884,0.637812899895131,0.838634582033504,0.336985893439485,0.901061357049038,0.16072558669708,0.855038231223746,0.79566670879636,0.91332076882317,0,0,0,0.853460445133014,0,0,0,0,7.39976859842283,5.87237189370939,4.20500550937752,1.32171328579026,0,0,0.786839080455332,0.786021525498329,1.23360899399706,0,0.32592226663359,0,0,0.111410456885174,0.589211814949674,0.221533894583621,0,0,0,0,0,0,0,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,2.21767417547206,2.67440195783507,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,7.75560528296651,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,1.24396869324463,0.720599767084807,1.8936365013957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75843064282698,6.03757209606648,2.95188983443421,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,1.50999940573032,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0.404234377916439,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:42055874..42055894,- | |||
}} |
Revision as of 00:07, 13 September 2013
Short description: | p@chr3:42055874..42055894, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:42055874..42055894, - |
Coexpression cluster: | C1175_Mast_CD14_Natural_CD19_Eosinophils_Basophils_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.95e-32 | 3 |
pro-NK cell | 1.95e-32 | 3 |
leukocyte | 1.81e-22 | 136 |
eosinophil | 3.93e-22 | 2 |
lymphoid lineage restricted progenitor cell | 7.59e-19 | 52 |
lymphocyte | 1.82e-18 | 53 |
common lymphoid progenitor | 1.82e-18 | 53 |
hematopoietic stem cell | 9.14e-18 | 168 |
hematopoietic lineage restricted progenitor cell | 2.26e-17 | 120 |
hematopoietic cell | 9.57e-17 | 177 |
hematopoietic oligopotent progenitor cell | 1.99e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.99e-16 | 161 |
nongranular leukocyte | 9.73e-16 | 115 |
intermediate monocyte | 2.79e-11 | 9 |
CD14-positive, CD16-positive monocyte | 2.79e-11 | 9 |
mature alpha-beta T cell | 2.14e-09 | 18 |
alpha-beta T cell | 2.14e-09 | 18 |
immature T cell | 2.14e-09 | 18 |
mature T cell | 2.14e-09 | 18 |
immature alpha-beta T cell | 2.14e-09 | 18 |
mast cell | 3.44e-09 | 5 |
basophil mast progenitor cell | 3.44e-09 | 5 |
CD8-positive, alpha-beta T cell | 4.80e-09 | 11 |
B cell | 1.73e-07 | 14 |
mesenchymal cell | 4.06e-07 | 354 |
connective tissue cell | 6.30e-07 | 361 |
T cell | 8.18e-07 | 25 |
pro-T cell | 8.18e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.